Through Genome British Columbia’s GeneSolve program, Canada’s Michael Smith Genome Sciences Centre (GSC) is partnering with Swiss Vault to pilot next‑generation storage infrastructure tailored for genomics research. This collaboration combines smarter file systems, energy‑efficient hardware, and scalable, secure architecture to meet the rapidly increasing demands of genomic data management.
Timeline
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Building Better Storage for Genomics Data
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Professor Steven Jones Elected Fellow of the Learned Society of Wales
The Genome Sciences Centre is proud to announce that our Co-Director and Head of Bioinformatics, Professor Steven Jones, PhD, FRSC, FCAHS, FRCP(Edin), FLSW, has been elected as a Fellow of the Learned Society of Wales—a prestigious recognition of excellence and leadership in academic research.
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Enhancing Long-Read Sequencing: Introducing the Agilent Femto Pulse System at the GSC
We are excited to announce the arrival of the Agilent Femto Pulse System at the GSC! This high-sensitivity automated pulsed-field capillary electrophoresis instrument will be a game changer for nucleic acid quality control - detecting nucleic acids down to 50 fg/µL of DNA or RNA per sample and resolving fragments from 100 base pairs (bp) to over 165 kilobases (kb) in about 1.5 hours.
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Canada joins Federated EGA, establishing a significant global repository for secure sharing of human genomic and health data
In a major milestone for international biomedical research and the future of personalized medicine, the Canadian Genome-Phenome Archive (CGA), part of the Pan-Canadian Genome Library (PCGL) has joined the Federated European Genome-Phenome Archive (Federated EGA), marking the federation’s first significant expansion outside of Europe.
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GSC to Collaborate on Five Projects for the Canadian Precision Health Initiative
The GSC is proud to announce its collaboration on five groundbreaking projects as part of the Canadian Precision Health Initiative (CPHI). This ambitious national effort, launched today in Ottawa by the Honourable François-Philippe Champagne, Minister of Innovation, Science and Industry, represents an $81-million investment from the Government of Canada through Genome Canada. CPHI aims to sequence 100,000 genomes reflective of Canada’s diverse population, providing the foundation for more personalized, preventative, and cost-effective healthcare solutions. As one of three nodes in Canada’s national platform for genome sequencing and analysis (CGEn), the GSC is thrilled to contribute to this landmark initiative, helping to drive scientific excellence and innovation in precision medicine across the country.
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Dr. Marco Marra appointed as UBC Killam Professor
UBC has announced the appointment of Dr. Marco Marra as one of three new University Killam Professors. The University Killam Professorship—the highest honour UBC can confer on a faculty member—recognizes exceptional teachers and researchers who are leaders in their fields, and who have received international recognition for their achievements.
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Open Breadcrumb configuration options Breadcrumb GSC News Dr. Marco Marra appointed Officer of the Order of Canada Open configuration options Open configuration options Dec 18, 2024 Open configuration options Dr. Marco Marra appointed Officer of the Order
Her Excellency the Right Honourable Mary Simon, Governor General of Canada, announced today the appointment of Dr. Marco Marra as an Officer of the Order of Canada.
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Laura Evgin selected Canada Gairdner Early Career Investigator
Congratulations to Dr. Laura Evgin for being selected as one of the 2025 Canada Gairdner Early Career Investigators for her work in CAR T-cell therapy.
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Dr. Nadine Caron inducted into Canadian Medical Hall of Fame
Dr. Nadine Caron has been inducted into the Canadian Medical Hall of Fame in recognition of her transformative leadership in Indigenous health and surgical practice.
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Reflections from our Inaugural GSC Collaborator Forum 2024
Since our founding in 1999, the GSC has sequenced over 6,000,000,000,000,000 bases, sequenced the genomes of more than 350 species, and facilitated ground-breaking discoveries in cancer research. On October 22, 2024, we hosted our inaugural Collaborator Forum, bringing together a vibrant mix of researchers, industry experts, and both old and new colleagues to celebrate decades of collaboration and to foster new scientific partnerships.
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GSC Partners With Genome BC's Geneskool to Bring Genomics to Classrooms
The GSC is excited to partner with Genome BC (GBC)’s Geneskool to bring real-world genomics into the classroom as we re-open our doors to students and their teachers for educational tours.
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A decade of work advances care for children with cancer
Four out of five children diagnosed with cancer survive over the long term after treatment, but for 20 per cent of them, standard treatment is not enough. To improve outcomes for these kids, researchers at the Michael Cuccione Childhood Cancer Research Program at BC Children’s Hospital Research Institute (BCCHR) have been working for over a decade on the BC Pediatric Personalized OncoGenomics (PedsPOG) study, using genomics to identify treatments specific to an individual child’s cancer. In a paper recently published in Nature Communications, they showed that new therapeutic options can be identified when scientists have access to a child’s sequencing of both RNA and DNA — instead of DNA alone.
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The GSC part of a collaborative and interdisciplinary team on a mission to improve pediatric cancer treatment
The GSC is proud to have been a part of a collaborative and interdisciplinary team on a mission to improve pediatric cancer treatment. Read about how integrated whole genome and transcriptome analysis (WGTA) can improve clinical care of children diagnosed with cancers in this recent Nature publication and blog post by our Pediatric Personalized Oncogenomics (PedsPOG) team!
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The Genome Sciences Centre, Vancouver, Joins the Earth BioGenome Secretariat - Embarking on a Groundbreaking Journey of Genomic Exploration in Biodiversity
The Genome Sciences Centre, a leading institution in genomic research and innovation, is proud to announce its recent affiliation as part of the Earth BioGenome Secretariat. This marks a significant milestone in the Centre's commitment to advancing the frontiers of genomics and biodiversity conservation.
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Government of Canada invests $15M in first-of-its-kind Pan-Canadian Genome Library
Canada is a world-leader in genomic research—the study of all of a person’s or population’s genes. The field, which involves sequencing genomes to identify variations that give researchers a better understanding of health and disease, holds enormous potential for improving the health of Canadians.
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BC Cancer researchers develop an improved hereditary cancer test
Researchers at the BC Cancer Research Institute have made an advancement in genetic testing that allows for more accurate prediction of which parent’s genes led to an individual’s increased cancer risk. This improves the efficiency of familial testing strategies and could eliminate concern for patients at high risk of cancer caused by genes inherited from a parent.
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The genomes of four spruce trees native to North America
A new study, published in The plant journal, reports on the sequencing, assembly and comparative analysis of four spruce giga-genomes. The new genomes, along with their associated gene annotations, are key resources to help monitor natural spruce biodiversity and improve the management of conifer forests in Canada.
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Addressing challenges associated with genome analysis when nucleic acids are extracted from formalin-fixed paraffin-embedded tissue samples
Formalin fixation of paraffin-embedded tissue samples is widely used to preserve tissue for clinical investigation. However, the integrity of the genomic material extracted from such samples is not always preserved, and it can lead to errors in downstream sequencing analysis, including somatic variant calling. GSC scientists conducted a comprehensive comparison of variant caller performance and established a bioinformatics-based approach to improve somatic variant calling from FFPE tissue samples.
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Whole Genome and Transcriptome Analysis Benefits Clinical Cancer Care
Precision oncology—the use of tumour genomics to identify cancer cell vulnerabilities—is a rapidly evolving field of study. A new publication from BC Cancer summarizes how whole genome and transcriptome analysis can impact treatment options and clinical management for patients enrolled in BC Cancer’s Personalized OncoGenomics Program.
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The Canada BioGenome Project joins international quest to understand life on Earth
Canadian biodiversity is one of our greatest national treasures. From coast to coast to coast—the Arctic to the Rockies, the prairies to the Great Lakes—the True North is home to a vast assortment of plants and animals found nowhere else on Earth. The Canada BioGenome Project seeks to better understand and conserve our natural heritage by sequencing the genomes of four hundred Canadian species.
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Dr. Aly Karsan receives UBC Killam Research Award
Dr. Aly Karsan has been awarded a UBC Killam Research Award, a prestigious UBC Faculty Research Award. This award recognizes faculty who have a track record of outstanding research and scholarly contributions. Dr. Karsan was 1 of 4 UBC Killam Research Prize recipients from the applied science, medicine and sciences area, in the Senior Category.
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New open-source interpretation and reporting platform for precision oncology
A new Platform for Oncogenomic Reporting and Interpretation (PORI) integrates multiple knowledge bases into a program for sharing relevant data from genome analysis related to precision oncology.
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Martin Krzywinski Makes Music with Pi
Every March 14th, GSC scientist and data visualization expert, Martin Krzywinski, finds a creative way to recognize and celebrate Pi Day. This year, in collaboration with Gregory Coles and Emma Beauxis-Aussalet, Martin produced a music album based on the iconic number.
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Sequencing the Spruce Weevil Genome
In a collaboration between the GSC’s Bioinformatics Technology Lab, the Michael Smith Lab at UBC, NC State University in Raleigh and Laurentian Forestry Centre Natural Resources Canada, the nuclear and mitochondrial genomes of Pissodes strobi (an insect also known as the spruce weevil or the white pine weevil) were sequenced. The results could help researchers control the destructive impact of this forest pest.
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Lichen Genome Sequenced
The genome of the Giant’s Dot Lichen—a Canadian species discovered in 2019—is sequenced as part of the CanSeq150 project.
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Molecular subgroups of PNEN
Four new molecular subgroups of Pancreatic Neuroendocrine Neoplasms identified through research done in Dr. Sharon Gorski's lab.
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Single Cell RNA sequencing
GSC researchers developed a new method of single-cell RNA sequencing published in Frontiers in Genetics.
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Quality Clinical Care
The College of Physicians and Surgeons of BC Diagnostic Accreditation Program (DAP) gave full accreditation to GSC facilities.
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Dr. Adi Steif
Dr. Adi Steif joined the GSC to continue research on large-scale genetic, transcriptomic and epigenetic profiling of tissues at the single cell level using statistical machine learning approaches.
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Canadian Medical Hall of Fame
Dr. Marco Marra was one of six outstanding individuals inducted into the Canadian Medical Hall of Fame.
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Molecular Biology of Colorectal Cancer
Research by Dr. Isabella Tai's lab provided insight into the molecular biology of colorectal cancer.
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New GSC Faculty
The GSC welcomed Dr. Laura Evgin, who’s research is focused on Chimeric antigen receptor (CAR) modified T cells and oncolytic viruses, and Dr. Alexander Wyatt, who studies metastatic genitourinary cancers, including prostate and bladder cancer.
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International Effort to Sequence Cervical Cancers in Ugandan women
Analysis of the genomic characteristics of cervical cancers in Ugandan women, led by Dr. Marco Marra, published in Nature Genetics.
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Team Science Award
The American Association for Cancer Research presented the Cancer Genome Atlas—which several members of the GSC have contributed to including Drs. Marco Marra, Steven Jones, and Gordon Robertson— with a team science award.
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COVID-19
GSC became one of four Canadian institutions to use genome science to better understand COVID-19 infection.
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POG 570
Nature Cancer published data from the first 570 patients studied through the POG program and featured the article on its cover.
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The GSC turned 20
On November 15, 2019 the GSC celebrated its 20th anniversary with an Open House and a Scientific Symposium.
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Marathon of Hope
GSC joined the Marathon of Hope Cancer Centres Network with the goal of advancing precision medicine by working collaboratively and sharing data.
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Canada Research Chair for Computational Genomics
Dr. Steven. Jones appointed Canada Research Chair for Computational Genomics, part of an initiative by the Government of Canada and the Canada Foundation for Innovation to fund Canada Research Chairs at 52 institutions across Canada for research excellence.
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Stellar Sea Lion Genome Sequenced
The stellar sea lion genome sequenced as part of a GSC study led by Dr. Steven Jones. Results are published in Genes.
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Information Security
The GSC achieved ISO27001 certification—one of the highest standards for information security management in the world.
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Mining Genomes for Antimicrobial Peptides
Dr. Inanc Birol developed a new technique, published in Scientific Reports, to mine novel antimicrobial therapies from the genomes of a variety of species, aiding in the global fight against antibiotic resistance.
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Silent Genomes Project
The Silent Genomes Project, which aims to reduce health care disparities and improve diagnostic success for children with genetic diseases from Indigenous populations, was launched. In this documentary, Dr. Nadine Caron, First Nations Health Authority Chair in Cancer and Wellness, Senior Scientist at the GSC and member of the Sagamok Anishnawbek First Nation, discussed her role in the project.
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Grizzly Bear Genome Sequenced
The grizzly bear genome sequenced as part of a GSC study led by Dr. Steven Jones. Results are published in Genes.
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CanSeq150
In recognition of Canada's 150th anniversary, the GSC joined other Canadian genome centres in CanSeq150, aiming to sequence the genomes of 150 iconic Canadian species. The GSC has since sequenced the beluga whale, grizzly bear, sea otter, sea lion and several others.
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Northern Biobank
Dr. Caron received $1.25 million from Genome British Columbia for the Northern Biobank Initiative to address a growing risk that rural and remote communities in B.C. could be excluded from significant advances made in genomic research and precision medicine.
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1,000,000,000,000,000 base-pairs of DNA
On December 22 2015, the GSC reached the 1 petabase milestone, generating the 1,000,000,000,000,000th base-pair of DNA sequence.
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Reference Epigenomes
The GSC, as part of the International Human Epigenome Consortium and under leadership of Dr. Martin Hirst, contributed to the analysis of over 111 reference human epigenomes published in Nature.
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Prostate Cancer Therapeutics
Dr. Marianne Sadar discovered a completely novel drug to treat prostate cancer; in 2015, EPI-506 entered clinical trails for use in treatment-resistant patients.
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Investigating Triple-Negative Breast Cancer
Dr. Sharon Gorski published a study in Clinical Cancer Research demonstrating that autophagy inhibition improves treatment efficacy in triple-negative breast cancer.
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GSC Scientists Among the World's Most Infuential Minds
Since 2014, several GSC scientists have been recognized as among the World's Most Influential Minds by Thomson Reuters/Clarivate Analytics. Eleven GSC scientists were listed again in 2020.
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Spruce Genomics
GSC scientists, led by Dr. Inanc Birol, published in Bioinformatics the complete sequence and assembly of the White Spruce genome which, at 20 gigabases, was the largest genome ever sequenced at the time.
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Dr. Martin Hirst
Dr. Martin Hirst became Head of Epigenomics at the GSC, conducting research focused on understanding epigenetic dysfunction in cancer.
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Dr. Marianne Sadar
Dr. Marianne Sadar, who’s research focuses on the development of therapeutics for prostate cancer, became a Distinguished Scientist at the GSC.
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Medulloblastoma Advanced Genomics International Consortium
The GSC joined the Medulloblastoma Advanced Genomics International Consortium (MAGIC), which aims to use genome science to define and understand subgroups of medulloblastoma, the most common childhood brain cancer.
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Cancer and Microbes
Dr. Robert Holt published the first evidence of a link between colorectal cancer and Fusobacterium nucleatum in Genome Research, highlighting the link between microbes and cancer. The study was named as one of Time Magazine's top 10 medical breakthroughs of 2011.
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Informing Patient Care
The GSC was the first in the world to demonstrate the use of whole genome analysis to inform cancer patient treatment planning, published in Genome Biology, ushering in a new era of personalized cancer care.
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Insights Into Lymphoma
Dr. Ryan Morin published a study in Nature Genetics describing recurrent somatic mutations in EZH2 in follicular and diffuse large B-cell lymphomas.
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Assembling Genomes
Dr. Inanc Birol created novel computational methods for analyzing and assembling the data produced from next generation sequencers, including the award winning ABySS genome assembler now used by bioinformaticians worldwide.
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Visualizing Genomics Data
GSC Staff Scientist Martin Krzywinski developed a novel way to visualize complex genomics data elegantly and efficiently using a method called Circos, published in Genome Research and now used by scientists worldwide.
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Centre for Clinical Genomics
Dr. Aly Karsan led the launch of the Centre for Clinical Genomics, which became the first College of American Pathologists (CAP) certified lab to use next generation sequencing technologies for cancer diagnostics, drastically reducing patient wait times for genetic testing.
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Advancing Epigenetics
In one of the first applications of next generation sequencing, Dr. Martin Hirst developed a technique to analyze the epigenome, known as ChIP-seq, published in Nature Methods. The method is now commonly used by researchers worldwide.
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The Cancer Genome Atlas
The GSC became the only international participant in The Cancer Genome Atlas (TCGA), a landmark project in cancer genomics which to date has characterized tumours from 33 different cancer types.
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Next Generation Sequencing
The GSC was one of only four genome centres in the world to receive a next generation DNA sequencer (Solexa, which was later bought by Illumina), a technology that revolutionized the modern field of genomics.
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Dr. Inanc Briol
Dr. Inanc Briol joined the GSC as a staff scientist to later become Distinguished Scientist and Director of the Bioinformatics Technology Lab.
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Dr. Sharon Gorski
Distinguished Scientist Dr. Sharon Gorski, who's research focuses on cell death and cell survival pathways in breast and pancreatic cancer, joined the GSC as a junior scientist.
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Dr. Gregg Morin
Dr. Gregg Morin joined GSC to establish a proteomic suite and continue his research on the genetic nature of lymphoid cancers.
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Dr. Isabella Tai
Dr. Isabella Tai, a senior MD/PhD scientist with an interest in understanding the mechanisms of chemotherapy resistance, metastasis and tumour progression in gastrointestinal cancers, joined the GSC.
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Sequencing of SARS
Scientists at the GSC were the first in the world to sequence the SARS coronavirus, providing vital information for disease control.
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The Healthy Aging Study
Dr. Angela Brooks-Wilson launched the Healthy Aging Study, aiming to understand genes that promote long-term good health in ‘super seniors’.
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Dr. Robert Holt
Dr. Robert Holt, Distinguished Scientist and Co-Director of the BC Cancer Immunotherapy Program, joined the GSC.
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Dr. Angela Brooks-Wilson
Dr. Angela Brooks-Wilson joined the GSC as a distinguished scientist investigating the genetic basis of cancer susceptibility, specifically lymphoid cancers.
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The Human Genome Project
GSC researchers contributed significantly to the first working draft of the complete human genome, published in a seminal Nature paper with Drs. Marco Marra and Steven Jones listed as authors.
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Genome Sciences Centre opened its doors at BC Cancer
Canada’s Michael Smith Genome Sciences Centre respectfully acknowledges that we operate on the traditional, ancestral and unceded territories of the xʷməθkwəy̓əm (Musqueam), Səl̓ílwətaʔ/Selilwitulh (Tsleil-Waututh), and Skwxwú7mesh (Squamish) nations who have cared and nurtured this land for all time. We give thanks, as uninvited guests, to be able to live and work on these lands.
