Constructing a physical map from linked reads. The physical map can then be used to scaffold draft genome assemblies.

If you use Physlr in your research, please cite:

Afshinfard A, Jackman SD, Wong J, Coombe L, Chu J, Nikolic V, Dilek G, Malkoç Y, Warren RL, Birol I. Physlr: Next-Generation Physical Maps. DNA. 2022 Jun 10;2(2):116-30. doi:

Current release:

GitHub release page for Physlr:

Back to top