Alternative expression values of the type: Transcript for comparison: ABC_vs

Alternative expression values of the type: Transcript for comparison: ABC_vs_GCB (abs(SI) value > 2)

Distribution of log2 SI values for comparison: ABC_vs_GCB and data type: Transcript

Distribution of all splicing index values that meet the SI cutoff (indicated by red dotted lines) for the feature type: Transcript. The total number of features with SI values exceeding the cutoff, as well as the max and min log2 SI observed are noted in the legend. *If you can not see the figure below, click here

The following table provides a ranked list of alternatively expressed Transcript features for a single pair-wise library comparison. The first column contains the Gene Name (which links to the ALEXA-Seq gene record), the Feature Name, and the name of each library being compared (which links to the feature's coordinates in the UCSC Genome Browser and displays expression data). The 'SI' column reports the Splicing Index calculated for the feature. The 'Gene FC' column reports the Fold-Change calculated for the entire gene to which the feature belongs. The 'Seq FC' column reports the Fold-Change of the feature itself. The 'Reciprocity' column reports the Reciprocity Index (RI) for the feature. The 'Percent Seq DE' column reports the Percent Feature Contribution (PFC) value for the feature. A description of the purpose and calculation of SI, RI and PFC values can be found in our manuscript. Briefly, the SI value is a measure of the degree of change in expression of a feature (e.g. an exon) between two conditions relative to the change in expression at the gene level. The RI value is a measure of the degree to which the change of the feature is reciprocal in direction to that observed for the gene overall. For example, if an exon is up-regulated but the gene overall is down-regulated, this will give a higher RI value. The PFC value is a measure of the degree of differential expression of the feature compared to the entire gene. For example, if a gene is not changed overall between two conditions, but the feature is highly differentially expressed, this will give a higher PFC value. To sort this table by each of the data values, simply click the column header. A bold row indicates that the feature is not currently supported by EST or mRNA sequence alignments. For exon junction features the number of exons skipped by the junction is indicated as 'Sn' where n is the number of exons skipped (e.g. S0 means no exons skipped, S1 means one exon skipped, etc.).

RANK	ABC_vs_GCB (Gene \| Feature \| Links)	SI	Gene FC	Seq FC	Reciprocity (RI)	Percent Seq DE (PFC)	q-value
1	PRPSAP2 \| ENST00000441887 \| ABC \| GCB	-3.66	-1.33	-16.80	N/A	90.85	0.895
2	SNX8 \| ENST00000419693 \| ABC \| GCB	-3.43	-1.04	-11.16	N/A	98.49	0.895
3	ZCCHC7 \| ENST00000481507 \| ABC \| GCB	-3.42	-1.42	-15.16	N/A	88.58	0.895
4	STK17B \| ENST00000420683 \| ABC \| GCB	-3.31	-1.39	-13.76	N/A	88.89	0.895
5	DPM2 \| ENST00000314392 \| ABC \| GCB	-3.04	1.11	-7.43	-1.11	95.15	0.895
6	MMRN2 \| ENST00000474994 \| ABC \| GCB	2.80	-1.56	4.45	-1.85	77.00	0.666
7	IGHG2 \| ENST00000460164 \| ABC \| GCB	2.70	-1.80	3.61	-2.69	68.62	0.895
8	AC090774.4 \| ENST00000443508 \| ABC \| GCB	-2.67	2.23	-2.84	-7.69	56.50	0.895
9	CCDC58 \| ENST00000497726 \| ABC \| GCB	-2.64	2.29	-2.72	-10.74	54.65	0.895
10	PSMB7 \| ENST00000478817 \| ABC \| GCB	-2.53	1.36	-4.25	-1.54	82.46	0.895
11	ARHGAP24 \| ENST00000395184 \| ABC \| GCB	-2.42	1.81	-2.96	-3.40	64.70	0.895
12	SPAG1 \| ENST00000251809 \| ABC \| GCB	2.41	-1.39	3.82	-1.65	80.31	0.895
13	ATP6V1E1 \| ENST00000473248 \| ABC \| GCB	-2.38	1.01	-5.16	-1.01	99.62	0.895
14	ZCCHC7 \| ENST00000497924 \| ABC \| GCB	-2.37	-1.42	-7.34	N/A	85.05	0.895
15	ARHGAP24 \| ENST00000395183 \| ABC \| GCB	-2.16	1.81	-2.47	-4.82	60.38	0.895
16	LYRM4 \| ENST00000458438 \| ABC \| GCB	-2.14	1.01	-4.36	-1.02	99.12	0.895
17	ITGAE \| ENST00000263087 \| ABC \| GCB	-2.13	1.41	-3.11	-1.86	76.91	0.895
18	SMTN \| ENST00000422839 \| ABC \| GCB	2.12	-1.40	3.11	-1.85	77.01	0.895
19	BACH2 \| ENST00000406998 \| ABC \| GCB	-2.08	-1.11	-4.66	N/A	93.86	0.895
20	ATP1B1 \| ENST00000367815 \| ABC \| GCB	-2.05	1.17	-3.55	-1.28	89.07	0.895
21	C7orf44 \| ENST00000431651 \| ABC \| GCB	2.00	-1.15	3.46	-1.26	89.69	0.895
22	TMEM14C \| ENST00000466421 \| ABC \| GCB	1.98	1.04	4.08	N/A	97.44	0.895
23	SUMO1 \| ENST00000392246 \| ABC \| GCB	-1.97	1.51	-2.59	-2.55	69.64	0.895
24	TRAC \| ENST00000446106 \| ABC \| GCB	-1.97	-1.21	-4.73	N/A	89.22	0.895
25	MPG \| ENST00000475280 \| ABC \| GCB	-1.95	1.66	-2.33	-3.99	62.54	0.895
26	RDH14 \| ENST00000468071 \| ABC \| GCB	1.91	-1.02	3.67	-1.04	98.23	0.895
27	RPL36A \| ENST00000372849 \| ABC \| GCB	-1.89	1.77	-2.09	-8.07	56.19	0.895
28	S100A13 \| ENST00000440685 \| ABC \| GCB	1.88	1.26	4.64	N/A	86.76	0.895
29	RP4-694B14.1 \| ENST00000439498 \| ABC \| GCB	1.83	1.18	4.21	N/A	89.45	0.895
30	ATP2A1 \| ENST00000395503 \| ABC \| GCB	1.82	-1.43	2.47	-2.32	71.54	0.895
31	TPM4 \| ENST00000344824 \| ABC \| GCB	-1.79	1.41	-2.46	-2.24	72.33	0.895
32	CENPM \| ENST00000396434 \| ABC \| GCB	-1.79	-1.01	-3.52	N/A	98.83	0.895
33	AKAP2 \| ENST00000259318 \| ABC \| GCB	-1.78	-1.21	-4.16	N/A	88.30	0.895
34	CD72 \| ENST00000463720 \| ABC \| GCB	1.76	1.23	4.19	N/A	87.18	0.895
35	ARHGAP25 \| ENST00000485700 \| ABC \| GCB	-1.75	1.20	-2.81	-1.42	85.11	0.895
36	LHFPL2 \| ENST00000380345 \| ABC \| GCB	-1.75	-2.17	-7.29	N/A	71.95	0.895
37	LRWD1 \| ENST00000476270 \| ABC \| GCB	-1.74	-1.31	-4.38	N/A	84.50	0.895
38	MSH2 \| ENST00000406134 \| ABC \| GCB	-1.74	1.05	-3.18	-1.09	96.00	0.895
39	LRP5L \| ENST00000484509 \| ABC \| GCB	-1.73	-1.13	-3.76	N/A	91.35	0.895
40	CREB3L4 \| ENST00000477617 \| ABC \| GCB	1.72	-1.58	2.09	-4.24	61.78	0.895
41	XAF1 \| ENST00000346752 \| ABC \| GCB	-1.72	1.15	-2.86	-1.31	88.29	0.895
42	ADD3 \| ENST00000468345 \| ABC \| GCB	1.69	-1.42	2.28	-2.46	70.31	0.895
43	ZFYVE20 \| ENST00000449964 \| ABC \| GCB	-1.69	1.01	-3.19	-1.02	99.06	0.895
44	XRCC3 \| ENST00000352127 \| ABC \| GCB	1.67	-1.18	2.70	-1.41	85.56	0.895
45	STK17B \| ENST00000409228 \| ABC \| GCB	-1.66	-1.39	-4.37	N/A	81.82	0.895
46	PSMB7 \| ENST00000474081 \| ABC \| GCB	-1.65	1.36	-2.31	-2.16	73.16	0.895
47	HSPBP1 \| ENST00000433386 \| ABC \| GCB	-1.64	-1.37	-4.28	N/A	82.17	0.895
48	HCLS1 \| ENST00000428394 \| ABC \| GCB	1.64	1.05	3.28	N/A	95.72	0.895
49	SERF2 \| ENST00000249786 \| ABC \| GCB	-1.63	-1.05	-3.26	N/A	95.98	0.895
50	SLC41A1 \| ENST00000484228 \| ABC \| GCB	1.63	-1.10	2.80	-1.21	91.19	0.895
51	SH3BGRL \| ENST00000463546 \| ABC \| GCB	1.62	-1.26	2.44	-1.69	79.66	0.895
52	ZNF415 \| ENST00000421033 \| ABC \| GCB	1.61	-1.12	2.73	-1.25	90.02	0.895
53	C17orf45 \| ENST00000487066 \| ABC \| GCB	1.61	1.00	3.05	N/A	99.84	0.895
54	TBC1D15 \| ENST00000491063 \| ABC \| GCB	1.57	1.10	3.28	N/A	92.36	0.895
55	PSMB9 \| ENST00000414474 \| ABC \| GCB	-1.56	1.13	-2.61	-1.30	88.43	0.895
56	ZNF668 \| ENST00000442862 \| ABC \| GCB	-1.56	-1.28	-3.77	N/A	84.51	0.895
57	FDPS \| ENST00000492244 \| ABC \| GCB	1.54	1.01	2.95	N/A	98.81	0.895
58	NCSTN \| ENST00000424645 \| ABC \| GCB	-1.53	1.10	-2.62	-1.22	90.96	0.895
59	EXOG \| ENST00000447573 \| ABC \| GCB	-1.52	1.27	-2.25	-1.84	77.12	0.895
60	ZNF512 \| ENST00000494548 \| ABC \| GCB	1.52	-1.36	2.10	-2.41	70.77	0.895
61	ERBB2IP \| ENST00000416865 \| ABC \| GCB	-1.51	1.00	-2.84	-1.00	99.93	0.895
62	NR3C1 \| ENST00000343796 \| ABC \| GCB	-1.51	-1.69	-4.81	N/A	74.90	0.895
63	SLC4A5 \| ENST00000479776 \| ABC \| GCB	1.48	2.35	6.54	N/A	68.77	0.895
64	UBR3 \| ENST00000484596 \| ABC \| GCB	-1.47	-1.26	-3.49	N/A	84.41	0.895
65	LNPEP \| ENST00000395770 \| ABC \| GCB	1.46	1.02	2.81	N/A	97.70	0.895
66	RBM39 \| ENST00000463098 \| ABC \| GCB	1.41	-1.15	2.31	-1.41	85.52	0.895
67	RP11-371B4.1 \| ENST00000359713 \| ABC \| GCB	1.41	-1.22	2.19	-1.66	80.05	0.895
68	RP11-220I1.2 \| ENST00000430809 \| ABC \| GCB	1.40	-1.09	2.41	-1.22	90.86	0.895
69	TREX1 \| ENST00000456089 \| ABC \| GCB	1.40	1.30	3.43	N/A	82.46	0.895
70	CLTC \| ENST00000472651 \| ABC \| GCB	-1.40	-1.19	-3.14	N/A	86.70	0.895
71	ATXN7L1 \| ENST00000318724 \| ABC \| GCB	1.39	1.22	3.20	N/A	85.22	0.895
72	RP5-1051J4.2 \| ENST00000313192 \| ABC \| GCB	1.39	-1.31	2.00	-2.25	72.21	0.895
73	TCP1 \| ENST00000392168 \| ABC \| GCB	-1.38	1.13	-2.31	-1.34	87.41	0.895
74	CECR5 \| ENST00000486462 \| ABC \| GCB	-1.38	-1.01	-2.61	N/A	99.41	0.895
75	LA16c-60H5.1 \| ENST00000399898 \| ABC \| GCB	1.35	-1.23	2.07	-1.81	77.66	0.895
76	YWHAZ \| ENST00000418997 \| ABC \| GCB	-1.35	-1.11	-2.82	N/A	90.78	0.895
77	PITPNB \| ENST00000320996 \| ABC \| GCB	-1.33	1.15	-2.18	-1.45	84.40	0.895
78	TLE6 \| ENST00000482627 \| ABC \| GCB	1.33	-1.15	2.19	-1.44	84.83	0.895
79	DHRS4 \| ENST00000397074 \| ABC \| GCB	-1.33	1.01	-2.49	-1.02	99.06	0.895
80	CREB1 \| ENST00000494983 \| ABC \| GCB	1.33	-1.04	2.41	-1.10	95.41	0.895
81	SYK \| ENST00000375746 \| ABC \| GCB	-1.32	-1.12	-2.81	N/A	89.78	0.895
82	SPHK2 \| ENST00000426514 \| ABC \| GCB	-1.32	-1.07	-2.68	N/A	93.26	0.895
83	ICAM2 \| ENST00000418105 \| ABC \| GCB	-1.31	-1.15	-2.86	N/A	88.04	0.895
84	PDLIM7 \| ENST00000359895 \| ABC \| GCB	-1.31	-1.27	-3.15	N/A	82.77	0.895
85	INSIG1 \| ENST00000342407 \| ABC \| GCB	-1.31	1.21	-2.05	-1.72	79.13	0.895
86	AGPAT3 \| ENST00000398061 \| ABC \| GCB	-1.31	-1.02	-2.52	N/A	97.99	0.895
87	ELL3 \| ENST00000497700 \| ABC \| GCB	-1.29	-1.36	-3.32	N/A	79.77	0.895
88	PVRIG \| ENST00000471803 \| ABC \| GCB	-1.29	-1.37	-3.34	N/A	79.47	0.895
89	ARSA \| ENST00000453344 \| ABC \| GCB	-1.28	-1.19	-2.89	N/A	86.14	0.666
90	CRIP3 \| ENST00000274990 \| ABC \| GCB	-1.28	-1.46	-3.53	N/A	77.05	0.895
91	B3GAT1 \| ENST00000392580 \| ABC \| GCB	-1.28	8.26	3.41	N/A	36.74	0.895
92	SLC39A1 \| ENST00000368621 \| ABC \| GCB	-1.28	-1.11	-2.69	N/A	90.26	0.895
93	NEDD1 \| ENST00000411739 \| ABC \| GCB	-1.27	1.02	-2.37	-1.04	98.03	0.895
94	VAMP7 \| ENST00000488344 \| ABC \| GCB	-1.27	1.18	-2.04	-1.61	81.05	0.895
95	SERF2 \| ENST00000381359 \| ABC \| GCB	-1.26	-1.05	-2.51	N/A	94.90	0.895
96	BANK1 \| ENST00000444316 \| ABC \| GCB	-1.25	-1.56	-3.71	N/A	74.69	0.895
97	AKAP2 \| ENST00000471798 \| ABC \| GCB	-1.25	-1.21	-2.87	N/A	84.79	0.895
98	ICAM1 \| ENST00000444336 \| ABC \| GCB	1.24	-1.15	2.05	-1.49	83.55	0.895
99	RPL8 \| ENST00000394920 \| ABC \| GCB	1.23	-1.08	2.17	-1.22	90.82	0.895
100	USP40 \| ENST00000496298 \| ABC \| GCB	-1.23	-1.21	-2.84	N/A	84.72	0.895
101	UNC84A \| ENST00000483996 \| ABC \| GCB	1.23	-1.06	2.23	-1.14	93.72	0.895
102	SULF2 \| ENST00000433632 \| ABC \| GCB	1.21	1.64	3.80	N/A	72.92	0.895
103	TMEM50B \| ENST00000484377 \| ABC \| GCB	-1.21	1.13	-2.05	-1.40	85.77	0.895
104	NFYC \| ENST00000372652 \| ABC \| GCB	-1.20	-1.02	-2.34	N/A	98.01	0.895
105	METTL11A \| ENST00000372483 \| ABC \| GCB	1.19	1.07	2.44	N/A	93.01	0.895
106	EBP \| ENST00000498425 \| ABC \| GCB	1.19	1.35	3.07	N/A	79.03	0.895
107	COMMD6 \| ENST00000355801 \| ABC \| GCB	-1.19	-1.07	-2.43	N/A	93.13	0.895
108	STRBP \| ENST00000348403 \| ABC \| GCB	-1.19	-1.58	-3.61	N/A	73.65	0.895
109	REPIN1 \| ENST00000467980 \| ABC \| GCB	-1.19	-1.12	-2.55	N/A	89.09	0.895
110	AHCTF1 \| ENST00000498601 \| ABC \| GCB	-1.18	-1.04	-2.37	N/A	95.20	0.895
111	CAMTA1 \| ENST00000476163 \| ABC \| GCB	-1.18	1.10	-2.05	-1.32	87.87	0.895
112	OSBPL10 \| ENST00000466604 \| ABC \| GCB	-1.17	-1.42	-3.21	N/A	76.77	0.895
113	PNPLA4 \| ENST00000442940 \| ABC \| GCB	1.17	-1.09	2.06	-1.28	88.98	0.895
114	PNPLA4 \| ENST00000444736 \| ABC \| GCB	1.17	-1.09	2.06	-1.28	88.96	0.895
115	NT5C2 \| ENST00000470299 \| ABC \| GCB	-1.17	-1.05	-2.36	N/A	94.77	0.895
116	PXK \| ENST00000495557 \| ABC \| GCB	-1.16	-1.72	-3.85	N/A	71.31	0.895
117	BRD2 \| ENST00000495733 \| ABC \| GCB	-1.16	-1.11	-2.47	N/A	90.02	0.895
118	TMEM214 \| ENST00000404032 \| ABC \| GCB	-1.15	-1.09	-2.42	N/A	91.43	0.895
119	ZFAND5 \| ENST00000343431 \| ABC \| GCB	1.15	1.00	2.23	N/A	99.75	0.895
120	PIK3AP1 \| ENST00000468783 \| ABC \| GCB	-1.14	-1.37	-3.02	N/A	77.89	0.895
121	NFKBIL1 \| ENST00000376146 \| ABC \| GCB	-1.14	-1.52	-3.35	N/A	74.34	0.895
122	NSBP1 \| ENST00000451455 \| ABC \| GCB	-1.14	-2.12	-4.67	N/A	67.24	0.895
123	SDHB \| ENST00000491274 \| ABC \| GCB	1.14	1.29	2.84	N/A	80.50	0.895
124	IL6R \| ENST00000344086 \| ABC \| GCB	1.14	1.53	3.36	N/A	74.17	0.895
125	IFT88 \| ENST00000351808 \| ABC \| GCB	1.14	1.02	2.25	N/A	97.38	0.895
126	ABI3BP \| ENST00000466947 \| ABC \| GCB	-1.14	-1.81	-3.98	N/A	69.98	0.895
127	WWC3 \| ENST00000466248 \| ABC \| GCB	1.14	-1.07	2.06	-1.21	91.47	0.895
128	ZNF226 \| ENST00000413984 \| ABC \| GCB	1.14	1.03	2.26	N/A	96.77	0.895
129	GOSR2 \| ENST00000225567 \| ABC \| GCB	1.13	1.08	2.36	N/A	92.12	0.895
130	EIF3D \| ENST00000478547 \| ABC \| GCB	1.13	1.06	2.32	N/A	93.54	0.895
131	URG4 \| ENST00000426198 \| ABC \| GCB	-1.12	-1.20	-2.61	N/A	84.19	0.895
132	ELL3 \| ENST00000467869 \| ABC \| GCB	-1.12	-1.36	-2.94	N/A	77.97	0.895
133	VCAM1 \| ENST00000347652 \| ABC \| GCB	1.11	-1.08	2.01	-1.23	90.56	0.895
134	METTL11A \| ENST00000482347 \| ABC \| GCB	1.11	1.07	2.30	N/A	92.55	0.895
135	CCNDBP1 \| ENST00000356633 \| ABC \| GCB	-1.10	1.05	-2.03	-1.16	93.16	0.895
136	SYS1 \| ENST00000453003 \| ABC \| GCB	1.10	1.07	2.28	N/A	92.81	0.895
137	PSRC1 \| ENST00000369904 \| ABC \| GCB	1.09	1.04	2.23	N/A	95.05	0.895
138	CCNL2 \| ENST00000488340 \| ABC \| GCB	1.09	-1.06	2.01	-1.18	92.30	0.895
139	FRMD4A \| ENST00000492155 \| ABC \| GCB	1.09	-1.06	2.02	-1.17	92.67	0.895
140	PANK2 \| ENST00000399552 \| ABC \| GCB	1.08	1.11	2.34	N/A	89.43	0.895
141	NDEL1 \| ENST00000380025 \| ABC \| GCB	-1.08	1.00	-2.11	-1.00	99.86	0.895
142	C3orf1 \| ENST00000493694 \| ABC \| GCB	1.07	1.69	3.55	N/A	70.70	0.895
143	IL12RB1 \| ENST00000221270 \| ABC \| GCB	-1.07	-1.24	-2.60	N/A	81.54	0.895
144	TOP2B \| ENST00000419167 \| ABC \| GCB	-1.07	-1.23	-2.58	N/A	82.03	0.895
145	RABGAP1L \| ENST00000367690 \| ABC \| GCB	-1.07	-1.14	-2.39	N/A	86.91	0.895
146	PFKL \| ENST00000491298 \| ABC \| GCB	-1.06	-2.14	-4.46	N/A	66.31	0.895
147	USMG5 \| ENST00000369815 \| ABC \| GCB	1.06	1.21	2.53	N/A	82.83	0.895
148	AC002480.6 \| ENST00000325349 \| ABC \| GCB	1.06	1.26	2.62	N/A	80.84	0.895
149	SH3GLB2 \| ENST00000372559 \| ABC \| GCB	1.05	1.02	2.12	N/A	97.03	0.895
150	DSCR3 \| ENST00000476950 \| ABC \| GCB	1.05	1.13	2.34	N/A	87.30	0.895
151	UBE2E1 \| ENST00000346855 \| ABC \| GCB	1.05	-1.00	2.06	-1.01	99.33	0.895
152	MGEA5 \| ENST00000439817 \| ABC \| GCB	-1.05	-1.25	-2.58	N/A	80.94	0.895
153	EPB41 \| ENST00000488277 \| ABC \| GCB	-1.03	-1.59	-3.24	N/A	71.81	0.895
154	AC074289.1 \| ENST00000413030 \| ABC \| GCB	-1.03	-1.22	-2.49	N/A	82.04	0.895
155	SDHALP2 \| ENST00000455183 \| ABC \| GCB	1.03	1.05	2.13	N/A	94.43	0.895
156	MYL6 \| ENST00000348108 \| ABC \| GCB	-1.02	1.00	-2.02	-1.00	99.82	0.895
157	AC010746.3 \| ENST00000392308 \| ABC \| GCB	1.02	1.24	2.50	N/A	81.28	0.895
158	SAP30BP \| ENST00000293208 \| ABC \| GCB	-1.01	-1.12	-2.25	N/A	88.13	0.895
159	PPP2R4 \| ENST00000423100 \| ABC \| GCB	-1.01	-1.07	-2.15	N/A	91.81	0.895
160	EEF1D \| ENST00000422753 \| ABC \| GCB	-1.00	-1.28	-2.57	N/A	79.05	0.895