ABOUT THIS RELEASE
This portal provides access to quality-controlled genomic variant data generated from Canadian genomic cohorts. These data were generated using the Broad Institute of MIT and Harvard's gnomAD QC pipeline adapted for the Canadian population. Downloads include a README covering pipeline version and data-processing details, and information on the release sites Hail table. The Hail table contains variant annotations, allele frequencies, and quality filters calculated for the overall dataset as well as across subsets inferred by PCA and ancestry inference. The gnomAD-Canada database was created as part of the Canadian Genomic Data Commons (CGDC) and the Pan-Canadian Genome Library (PCGL) .
AVAILABLE FILES
Hail Table containing per-site variant annotations, allele frequencies, and quality filters for the HostSeq cohort.
Release notes, file format descriptions, pipeline version information, and instructions for working with the data. Also available rendered on this site.
This work was supported by the Canadian Foundation for Innovation (CFI; Project ID 43084) through the Canadian Genomic Data Commons (CGDC) and the Canadian Institutes of Health Research (CIHR; Project ID 190675; McGill 263096) through the Pan-Canadian Genome Library (PCGL).