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Parent Directory - 2020_02_07/ 17-Mar-2020 16:32 - timepoint14_crispr_sgrna/ 17-Mar-2020 16:32 - A26685_1_lane_dupsFlagged.bam 07-Sep-2021 14:05 5.8G A26685_1_lane_dupsFlagged.bed.gz 08-Sep-2021 10:12 831M A26688_1_lane_dupsFlagged.bam 07-Sep-2021 14:06 5.2G A26688_1_lane_dupsFlagged.bed.gz 08-Sep-2021 10:12 699M A26690_1_lane_dupsFlagged.bam 07-Sep-2021 14:07 2.6G A26690_1_lane_dupsFlagged.bed.gz 08-Sep-2021 10:12 287M A26691_1_lane_dupsFlagged.bam 07-Sep-2021 14:09 6.5G A26691_1_lane_dupsFlagged.bed.gz 08-Sep-2021 10:12 835M A28471_1_lane_dupsFlagged.bam 07-Sep-2021 14:09 2.4G A28471_1_lane_dupsFlagged.bed.gz 08-Sep-2021 10:12 298M AAACAT_cpg.bed 22-Apr-2019 08:27 537M blacklist.bed 09-Sep-2021 18:04 853 Boxplot_GC_HEC116_KO_HEC116_WT.pdf 13-Feb-2020 10:10 22K Boxplot_L_HEC116_KO_HEC116_WT_with_GC_correction.pdf 13-Feb-2020 10:10 21K chr19.hg38_no_alt.fa 07-Sep-2021 15:36 57M clustering.pdf 13-Feb-2020 12:28 10K common_genes 05-Feb-2020 18:22 27K COV434_DOXY.html 17-Aug-2019 15:06 1.7M COV434_H3K27me3_static.gene.filtered.unique.rpkm 05-Feb-2020 18:22 107K COV434_pIND20-BRG1_2.1_H3K27ac_dmso_unique 26-Oct-2018 13:01 144K COV434_pInd20_BRG1_2.1_DMSO.html 17-Aug-2019 15:07 1.7M COV434_pInd20_BRG1_2.1_DOXY.html 17-Aug-2019 15:07 1.7M CTCF.html 25-Jul-2021 20:24 177K encode_enhancers_liftover.bed 15-Oct-2020 14:00 13M G401_H3K27me3_gain_and_H3K36me2_loss.bed 11-Nov-2020 09:10 2.1K G401_H3K27me3_loss_and_H3K36me2_gain.bed 11-Nov-2020 09:10 8.7K G401_static_H3K27me3.gene.filtered.unique.rpkm 05-Feb-2020 18:22 37K H3K27ac.html 25-Jul-2021 20:26 178K H3K27ac_overlap.pdf 31-Jan-2020 11:48 343K hg38v79_genes_hox.bed 15-Oct-2020 14:00 1.9K hg38v79_genes_tss_2000.bed 15-Oct-2020 14:00 7.9M lane8_AACTTG_S28_L008_I1_001_fastqc.html 12-Dec-2019 13:37 441K lane8_AACTTG_S28_L008_R1_001_fastqc.html 12-Dec-2019 13:37 578K lane8_AACTTG_S28_L008_R2_001_fastqc.html 12-Dec-2019 13:37 593K lane8_TAGCTT_S30_L008_I1_001_fastqc.html 12-Dec-2019 13:37 441K list_of_10 12-Dec-2019 12:47 42K louise.tar.gz 10-Nov-2021 17:46 141K mBM_HoxA9IDH1R132H_2016_bulk_summary.html 07-Dec-2021 08:53 4.2M mBM_HoxA9IDH1R132H_2019_bulk_summary.html 07-Dec-2021 08:53 4.3M mBM_HoxA9only_bulk_summary.html 07-Dec-2021 08:54 3.2M merged_CTCF.bed 07-Jun-2021 10:04 2.1M out.pdf 28-Apr-2020 09:19 4.3M Plot2D_HEC116_KO_HEC116_WT_with_GC_correction_with_L_correction.pdf 13-Feb-2020 10:10 890K PO1a.pdf 12-Jan-2021 12:20 20K PO1a.svg 12-Jan-2021 12:18 176K px0838_ideogram.pdf 26-Mar-2019 16:39 23M px0838_states.csv 11-Dec-2019 10:28 5.1K PX0838_UEX000291_13014-3.csv 11-Dec-2019 10:28 12K px1128_ideogram.pdf 26-Mar-2019 14:16 30M px1128_results.csv 11-Dec-2019 10:28 14K px1128_states.csv 11-Dec-2019 10:28 6.7K query_hello.fa 13-May-2020 10:59 171K R1_h3k27ac.fastq.gz 07-Sep-2021 15:37 24M R1_input.fastq.gz 07-Sep-2021 15:37 56M R2_h3k27ac.fastq.gz 07-Sep-2021 15:37 24M R2_input.fastq.gz 07-Sep-2021 15:37 57M rpkm.tsv 27-Feb-2020 11:52 685K s_1_1_CGTACTAG-TCTTACGC_150bp_242928.concat_chastity_passed.trim.merged.fixed_qc.html 17-Aug-2019 14:27 329K s_1_1_TCCTGAGC-AGAGGATA_150bp_242928.concat_chastity_passed.trim.merged.fixed_qc.html 17-Aug-2019 14:27 332K s_1_1_TCCTGAGC-TCTACTCT_150bp_242928.concat_chastity_passed.trim.merged.fixed_qc.html 17-Aug-2019 14:27 331K SRR5045382_fastqc.html 08-Jan-2021 12:19 592K SS_genes.pc.2000_TSS_2000.totalProfile.pdf 13-Feb-2020 12:28 448K SS_PET.pdf 13-Feb-2020 12:36 935K tmp 12-Dec-2018 14:34 443K tmp3.json 08-Nov-2019 12:40 2.5K
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