Distributions of all expression values and Top 1% of expressed Intergenic features for libraries: Sutent, Control
Distribution of log2 expression values for library: Sutent and data type: Intergenic
Distribution of all expression values for the feature type: Intergenic. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Distribution of log2 expression values for library: Control and data type: Intergenic
Distribution of all expression values for the feature type: Intergenic. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Top 1% of expressed Intergenic features
The following table provides a ranked list of the most highly expressed Intergenic features. Each column corresponds to an expression library. Each table cell contains the Gene Name (which links to the ALEXA-Seq gene record), followed by the Feature Name (which links to the feature's coordinates in the UCSC Genome Browser and displays expression data), the log2 expression value 'Exp' for the feature, and the percent expression value '% Exp' ([feature expression/gene expression]*100). Features that are NOT supported by an EST/mRNA sequence are indicated in bold. For exon junction features the number of exons skipped by the junction is indicated as 'Sn', where n is the number of exons skipped (e.g. S0 means no exons skipped, S1 means one exon skipped, etc.).
| RANK | Sutent (Gene | Feature | Exp | % Exp) | Control (Gene | Feature | Exp | % Exp) |
| 1 | SSU_rRNA_5 | IG1 | 9.88 | NA% | SSU_rRNA_5 | IG1 | 10.54 | NA% |
| 2 | AF347015.1 | IG30 | 9.16 | NA% | AF347015.1 | IG30 | 9.30 | NA% |
| 3 | RP11-124N19.1 RP11-124N19.2 | IG24 | 8.79 | NA% | RP11-124N19.1 RP11-124N19.2 | IG24 | 8.99 | NA% |
| 4 | GPRC5A hsa-mir-614 | IG2 | 8.57 | NA% | GPRC5A hsa-mir-614 | IG2 | 8.71 | NA% |
| 5 | NOL5A IDH3B | IG46 | 8.25 | NA% | NACA | IG51 | 8.52 | NA% |
| 6 | NACA | IG51 | 8.10 | NA% | GPX3 TNIP1 | IG41 | 7.94 | NA% |
| 7 | GPX3 TNIP1 | IG41 | 7.67 | NA% | NOL5A IDH3B | IG46 | 7.74 | NA% |
| 8 | DSG2 | IG51 | 7.50 | NA% | DSG2 | IG51 | 7.56 | NA% |
| 9 | ITGB3 C17orf57 | IG14 | 7.37 | NA% | KSR1 LGALS9 | IG50 | 7.27 | NA% |
| 10 | SAMD4B PAF1 | IG36 | 7.35 | NA% | GPR137C ERO1L | IG16 | 7.27 | NA% |
| 11 | ECH1 HNRNPL | IG18 | 7.16 | NA% | SLC25A15 hsa-mir-621 | IG23 | 7.26 | NA% |
| 12 | hsa-mir-614 GPRC5D | IG3 | 7.13 | NA% | SAMD4B PAF1 | IG36 | 6.97 | NA% |
| 13 | KSR1 LGALS9 | IG50 | 7.10 | NA% | ITGB3 C17orf57 | IG14 | 6.95 | NA% |
| 14 | snoR38 ST6GALNAC2 | IG6 | 6.99 | NA% | LRRC41 UQCRH | IG49 | 6.93 | NA% |
| 15 | RPS25 TRAPPC4 | IG23 | 6.82 | NA% | hsa-mir-614 GPRC5D | IG3 | 6.88 | NA% |
| 16 | SLC25A15 hsa-mir-621 | IG23 | 6.76 | NA% | AC100778.5 SNORD58 | IG27 | 6.79 | NA% |
| 17 | AC100778.5 SNORD58 | IG27 | 6.72 | NA% | RPS25 TRAPPC4 | IG23 | 6.77 | NA% |
| 18 | BRI3 BAIAP2L1 | IG34 | 6.71 | NA% | ECH1 HNRNPL | IG18 | 6.75 | NA% |
| 19 | RLBP1L1 ASPH | IG21 | 6.62 | NA% | LNPEP AC008865.3 | IG45 | 6.71 | NA% |
| 20 | LRRC41 UQCRH | IG49 | 6.61 | NA% | snoR38 ST6GALNAC2 | IG6 | 6.63 | NA% |
| 21 | RPL36 LONP1 | IG13 | 6.59 | NA% | C17orf84 PLD6 | IG40 | 6.58 | NA% |
| 22 | MARK2 RCOR2 | IG3 | 6.54 | NA% | PVR CEACAM19 | IG47 | 6.48 | NA% |
| 23 | C17orf84 PLD6 | IG40 | 6.50 | NA% | BRI3 BAIAP2L1 | IG34 | 6.41 | NA% |
| 24 | RPL23A TLCD1 | IG41 | 6.45 | NA% | Y_RNA UBE2D2 | IG3 | 6.39 | NA% |
| 25 | LNPEP AC008865.3 | IG45 | 6.42 | NA% | GARNL4 AC097370.10 | IG49 | 6.34 | NA% |
| 26 | SNORD81 SNORD47 | IG45 | 6.34 | NA% | RLBP1L1 ASPH | IG21 | 6.25 | NA% |
| 27 | MRPL28 TMEM8 | IG23 | 6.30 | NA% | CEBPD | IG1 | 6.19 | NA% |
| 28 | PCBP2 MAP3K12 | IG6 | 6.23 | NA% | snosnR60_Z15 SNORD79 | IG47 | 6.18 | NA% |
| 29 | GARNL4 AC097370.10 | IG49 | 6.22 | NA% | IMP3 SH3PX3 | IG21 | 6.13 | NA% |
| 30 | IAH1 ADAM17 | IG42 | 6.18 | NA% | MRPL28 TMEM8 | IG23 | 6.11 | NA% |
| 31 | CEBPD | IG1 | 6.18 | NA% | RAB14 | IG51 | 6.09 | NA% |
| 32 | PVR CEACAM19 | IG47 | 6.13 | NA% | EIF4EBP2 NODAL | IG22 | 6.04 | NA% |
| 33 | SNORD47 snosnR60_Z15 | IG46 | 6.10 | NA% | RBMS2 BAZ2A | IG47 | 6.03 | NA% |
| 34 | snosnR60_Z15 SNORD79 | IG47 | 6.08 | NA% | HMHA1 POLR2E | IG45 | 6.02 | NA% |
| 35 | GTF3A MTIF3 | IG24 | 6.07 | NA% | SSU_rRNA_5 | IG4 | 5.99 | NA% |
| 36 | MYL6 SMARCC2 | IG32 | 6.04 | NA% | RP11-119B16.1 PANK2 | IG25 | 5.99 | NA% |
| 37 | RP11-119B16.1 PANK2 | IG25 | 6.04 | NA% | RPL36 LONP1 | IG13 | 5.98 | NA% |
| 38 | RBMS2 BAZ2A | IG47 | 6.03 | NA% | AC022007.5 AC022007.5 | IG50 | 5.89 | NA% |
| 39 | TPCN1 | IG1 | 6.00 | NA% | USP14 THOC1 | IG4 | 5.88 | NA% |
| 40 | MPHOSPH8 AL354808.24 | IG48 | 5.98 | NA% | SENP2 IGF2BP2 | IG20 | 5.88 | NA% |
| 41 | Y_RNA UBE2D2 | IG3 | 5.97 | NA% | PCBP2 MAP3K12 | IG6 | 5.88 | NA% |
| 42 | HNF1A C12orf43 | IG20 | 5.96 | NA% | ACAA2 SCARNA17 | IG30 | 5.86 | NA% |
| 43 | SSU_rRNA_5 | IG4 | 5.94 | NA% | MAPK13 Z95152.1 | IG50 | 5.82 | NA% |
| 44 | IMP3 SH3PX3 | IG21 | 5.93 | NA% | CYP8B1 | IG1 | 5.82 | NA% |
| 45 | NFATC3 RBM35B | IG20 | 5.88 | NA% | MARK2 RCOR2 | IG3 | 5.81 | NA% |
| 46 | AC010326.7 AC010326.7 | IG20 | 5.84 | NA% | RPL23A TLCD1 | IG41 | 5.80 | NA% |
| 47 | C14orf166 NID2 | IG11 | 5.82 | NA% | SNORD79 SNORD78 | IG48 | 5.77 | NA% |
| 48 | PCYOX1 SNRPG | IG3 | 5.75 | NA% | TXNDC14 C11orf31 | IG47 | 5.74 | NA% |
| 49 | AC022007.5 AC022007.5 | IG50 | 5.74 | NA% | C14orf166 NID2 | IG11 | 5.70 | NA% |
| 50 | ARHGAP30 PVRL4 | IG10 | 5.73 | NA% | VPS4A COG8 | IG35 | 5.69 | NA% |
| 51 | SENP2 IGF2BP2 | IG20 | 5.70 | NA% | NFATC3 RBM35B | IG20 | 5.67 | NA% |
| 52 | KIAA1919 REV3L | IG3 | 5.67 | NA% | hsa-mir-570 AC069513.28 | IG49 | 5.66 | NA% |
| 53 | MMP24 EIF6 | IG25 | 5.66 | NA% | AC010326.7 AC010326.7 | IG20 | 5.65 | NA% |
| 54 | FAM69B SNORA43 | IG38 | 5.65 | NA% | AC012360.7 TGFBRAP1 | IG16 | 5.62 | NA% |
| 55 | ACAA2 SCARNA17 | IG30 | 5.63 | NA% | ZNF134 ZNF211 | IG9 | 5.62 | NA% |
| 56 | CYP8B1 | IG1 | 5.63 | NA% | ARIH1 hsa-mir-630 | IG11 | 5.62 | NA% |
| 57 | VPS4A COG8 | IG35 | 5.62 | NA% | ARHGAP30 PVRL4 | IG10 | 5.60 | NA% |
| 58 | SNORD22 SNORD31 | IG26 | 5.59 | NA% | SNORD47 snosnR60_Z15 | IG46 | 5.60 | NA% |
| 59 | EXOSC9 CCNA2 | IG29 | 5.58 | NA% | MLL TTC36 | IG6 | 5.60 | NA% |
| 60 | SNORA43 SNORA17 | IG39 | 5.57 | NA% | KLF11 CYS1 | IG49 | 5.59 | NA% |
| 61 | FUT11 CHCHD1 | IG15 | 5.57 | NA% | PMM1 FAM152B | IG29 | 5.59 | NA% |
| 62 | SNORD31 SNORD30 | IG27 | 5.57 | NA% | SMYD2 PTPN14 | IG27 | 5.58 | NA% |
| 63 | SNORD44 SNORD77 | IG50 | 5.56 | NA% | SFT2D2 AL009051.1 | IG22 | 5.55 | NA% |
| 64 | NSD1 RAB24 | IG15 | 5.54 | NA% | SNORD30 SNORD29 | IG28 | 5.55 | NA% |
| 65 | MTHFD2 SLC4A5 | IG4 | 5.53 | NA% | SNORD44 SNORD77 | IG50 | 5.54 | NA% |
| 66 | HOXA1 HOXA2 | IG7 | 5.50 | NA% | SNORA43 SNORA17 | IG39 | 5.53 | NA% |
| 67 | hsa-mir-21 U6 | IG17 | 5.48 | NA% | PGAM5 5S_rRNA | IG29 | 5.52 | NA% |
| 68 | SMYD2 PTPN14 | IG27 | 5.48 | NA% | NEK6 PSMB7 | IG42 | 5.52 | NA% |
| 69 | AC012360.7 TGFBRAP1 | IG16 | 5.47 | NA% | MYL6 SMARCC2 | IG32 | 5.51 | NA% |
| 70 | USP14 THOC1 | IG4 | 5.47 | NA% | SNORD31 SNORD30 | IG27 | 5.49 | NA% |
| 71 | SNORD79 SNORD78 | IG48 | 5.46 | NA% | KIAA1919 REV3L | IG3 | 5.47 | NA% |
| 72 | ARIH1 hsa-mir-630 | IG11 | 5.45 | NA% | IAH1 ADAM17 | IG42 | 5.45 | NA% |
| 73 | FAM131A CLCN2 | IG7 | 5.42 | NA% | TPCN1 | IG1 | 5.44 | NA% |
| 74 | MAPK13 Z95152.1 | IG50 | 5.41 | NA% | PTPMT1 KBTBD4 | IG19 | 5.44 | NA% |
| 75 | AL161652.25 IDE | IG42 | 5.39 | NA% | MPHOSPH8 AL354808.24 | IG48 | 5.42 | NA% |
| 76 | MRPL53 CCDC142 | IG14 | 5.37 | NA% | TRAF4 C17orf63 | IG44 | 5.42 | NA% |
| 77 | PMM1 FAM152B | IG29 | 5.35 | NA% | MORC2 AC004542.1 | IG8 | 5.41 | NA% |
| 78 | PTPMT1 KBTBD4 | IG19 | 5.35 | NA% | PANK2 RNF24 | IG26 | 5.40 | NA% |
| 79 | hsa-mir-23a AC020916.8 | IG38 | 5.35 | NA% | AP000753.4 ATL3 | IG48 | 5.39 | NA% |
| 80 | HMHA1 POLR2E | IG45 | 5.33 | NA% | NSD1 RAB24 | IG15 | 5.37 | NA% |
| 81 | B3GNT3 INSL3 | IG49 | 5.33 | NA% | KIAA1618 RNF213 | IG11 | 5.36 | NA% |
| 82 | AC002558.1 CDC27 | IG11 | 5.32 | NA% | DULLARD C17orf81 | IG50 | 5.35 | NA% |
| 83 | DOT1L PLEKHJ1 | IG34 | 5.32 | NA% | GHITM C10orf99 | IG11 | 5.33 | NA% |
| 84 | SNORD78 SNORD44 | IG49 | 5.31 | NA% | EXOSC9 CCNA2 | IG29 | 5.32 | NA% |
| 85 | CCNK AL110504.6 | IG30 | 5.30 | NA% | CCDC134 AL021453.1 | IG35 | 5.30 | NA% |
| 86 | MRPL51 NCAPD2 | IG12 | 5.29 | NA% | SNORD81 SNORD47 | IG45 | 5.30 | NA% |
| 87 | CORT DFFA | IG14 | 5.24 | NA% | CCNK AL110504.6 | IG30 | 5.30 | NA% |
| 88 | EMG1 LPCAT3 | IG44 | 5.24 | NA% | MTHFD2 SLC4A5 | IG4 | 5.29 | NA% |
| 89 | SNORD30 SNORD29 | IG28 | 5.24 | NA% | AC069513.28 hsa-mir-570 | IG48 | 5.27 | NA% |
| 90 | JPH3 AC010536.8 | IG41 | 5.22 | NA% | SNORD22 SNORD31 | IG26 | 5.27 | NA% |
| 91 | AC069257.28 PCYT1A | IG8 | 5.22 | NA% | AC069257.28 PCYT1A | IG8 | 5.26 | NA% |
| 92 | AP000753.4 ATL3 | IG48 | 5.21 | NA% | FAM36A RP11-11N7.2 | IG2 | 5.26 | NA% |
| 93 | FAM36A RP11-11N7.2 | IG2 | 5.21 | NA% | HOXA1 HOXA2 | IG7 | 5.25 | NA% |
| 94 | AC010178.40 | IG51 | 5.19 | NA% | FUT11 CHCHD1 | IG15 | 5.25 | NA% |
| 95 | MDM2 CPM | IG48 | 5.18 | NA% | SNORD29 SNORD28 | IG29 | 5.25 | NA% |
| 96 | hsa-mir-570 AC069513.28 | IG49 | 5.18 | NA% | SNORD24 SNORD75 | IG2 | 5.25 | NA% |
| 97 | LIPA IFIT5 | IG15 | 5.17 | NA% | MDM2 CPM | IG48 | 5.24 | NA% |
| 98 | CFD MED16 | IG34 | 5.16 | NA% | MMP24 EIF6 | IG25 | 5.24 | NA% |
| 99 | APC2 C19orf25 | IG12 | 5.16 | NA% | PCYOX1 SNRPG | IG3 | 5.23 | NA% |
| 100 | AC032027.7 IMPAD1 | IG50 | 5.15 | NA% | AC032027.7 IMPAD1 | IG50 | 5.22 | NA% |