Distributions of all expression values and Top 1% of expressed Intergenic features for libraries: Pre, Post
Distribution of log2 expression values for library: Pre and data type: Intergenic
Distribution of all expression values for the feature type: Intergenic. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Distribution of log2 expression values for library: Post and data type: Intergenic
Distribution of all expression values for the feature type: Intergenic. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Top 1% of expressed Intergenic features
The following table provides a ranked list of the most highly expressed Intergenic features. Each column corresponds to an expression library. Each table cell contains the Gene Name (which links to the ALEXA-Seq gene record), followed by the Feature Name (which links to the feature's coordinates in the UCSC Genome Browser and displays expression data), the log2 expression value 'Exp' for the feature, and the percent expression value '% Exp' ([feature expression/gene expression]*100). Features that are NOT supported by an EST/mRNA sequence are indicated in bold. For exon junction features the number of exons skipped by the junction is indicated as 'Sn', where n is the number of exons skipped (e.g. S0 means no exons skipped, S1 means one exon skipped, etc.).
| RANK | Pre (Gene | Feature | Exp | % Exp) | Post (Gene | Feature | Exp | % Exp) |
| 1 | AF347015.1 | IG30 | 9.89 | NA% | SSU_rRNA_5 | IG1 | 10.90 | NA% |
| 2 | COPS4 PLAC8 | IG19 | 8.99 | NA% | AF347015.1 | IG30 | 9.83 | NA% |
| 3 | SSU_rRNA_5 | IG1 | 8.58 | NA% | IGHM AL122127.6 | IG19 | 9.34 | NA% |
| 4 | IGHM AL122127.6 | IG19 | 7.98 | NA% | hsa-mir-155 MRPL39 | IG41 | 8.35 | NA% |
| 5 | MDM2 CPM | IG48 | 7.85 | NA% | AL122127.6 IGHJ3P | IG20 | 7.83 | NA% |
| 6 | hsa-mir-155 MRPL39 | IG41 | 7.76 | NA% | COPS4 PLAC8 | IG19 | 7.82 | NA% |
| 7 | IFI44L IFI44 | IG9 | 7.52 | NA% | IGLV3-13 | IG1 | 7.80 | NA% |
| 8 | AC096579.1 AC096579.1 | IG22 | 7.48 | NA% | AC096579.1 AC096579.1 | IG21 | 7.74 | NA% |
| 9 | AC096579.1 AC096579.1 | IG21 | 7.31 | NA% | EXOSC9 CCNA2 | IG29 | 7.71 | NA% |
| 10 | DTX4 MPEG1 | IG22 | 7.21 | NA% | IFI44L IFI44 | IG9 | 7.67 | NA% |
| 11 | LNPEP AC008865.3 | IG45 | 7.16 | NA% | AC096579.1 AC096579.1 | IG22 | 7.66 | NA% |
| 12 | AC097484.3 PPM1K | IG11 | 7.03 | NA% | SNORD47 snosnR60_Z15 | IG46 | 7.61 | NA% |
| 13 | DSG2 | IG51 | 6.84 | NA% | MDM2 CPM | IG48 | 7.55 | NA% |
| 14 | FAM36A RP11-11N7.2 | IG2 | 6.72 | NA% | SNORD81 SNORD47 | IG45 | 7.45 | NA% |
| 15 | SNORD47 snosnR60_Z15 | IG46 | 6.67 | NA% | AL122127.6 AL122127.6 | IG23 | 7.43 | NA% |
| 16 | SEPT11 CCNI | IG30 | 6.67 | NA% | IGHJ3P AL122127.6 | IG21 | 7.15 | NA% |
| 17 | AC002558.1 CDC27 | IG11 | 6.62 | NA% | FAM36A RP11-11N7.2 | IG2 | 7.09 | NA% |
| 18 | ZNF574 POU2F2 | IG19 | 6.62 | NA% | FRMD8 hsa-mir-612 | IG10 | 6.90 | NA% |
| 19 | RPL23A TLCD1 | IG41 | 6.62 | NA% | GLS STAT1 | IG12 | 6.87 | NA% |
| 20 | GPR137C ERO1L | IG16 | 6.59 | NA% | AC002558.1 CDC27 | IG11 | 6.86 | NA% |
| 21 | NEK6 PSMB7 | IG42 | 6.49 | NA% | SNORA76 TEX2 | IG15 | 6.85 | NA% |
| 22 | MPHOSPH8 AL354808.24 | IG48 | 6.40 | NA% | RPL23A TLCD1 | IG41 | 6.84 | NA% |
| 23 | AC012652.1 OIP5 | IG44 | 6.34 | NA% | TRIM44 | IG51 | 6.75 | NA% |
| 24 | ARIH1 hsa-mir-630 | IG11 | 6.34 | NA% | AL122127.6 AL122127.6 | IG22 | 6.73 | NA% |
| 25 | PXK PDHB | IG25 | 6.33 | NA% | RABEP1 NUP88 | IG14 | 6.70 | NA% |
| 26 | RABEP1 NUP88 | IG14 | 6.30 | NA% | CLDND1 GPR15 | IG18 | 6.68 | NA% |
| 27 | IAH1 ADAM17 | IG42 | 6.18 | NA% | LNPEP AC008865.3 | IG45 | 6.68 | NA% |
| 28 | snosnR60_Z15 SNORD79 | IG47 | 6.18 | NA% | ARIH1 hsa-mir-630 | IG11 | 6.67 | NA% |
| 29 | AC010178.40 | IG51 | 6.16 | NA% | SNORD22 SNORD31 | IG26 | 6.60 | NA% |
| 30 | LGALS8 HEATR1 | IG35 | 6.15 | NA% | SNORD29 SNORD28 | IG29 | 6.59 | NA% |
| 31 | TRIM44 | IG51 | 6.15 | NA% | snosnR60_Z15 SNORD79 | IG47 | 6.56 | NA% |
| 32 | CHST7 SLC9A7 | IG12 | 6.14 | NA% | LGALS8 HEATR1 | IG35 | 6.54 | NA% |
| 33 | CLDND1 GPR15 | IG18 | 6.12 | NA% | AC032027.7 IMPAD1 | IG50 | 6.48 | NA% |
| 34 | AC084398.25 CCDC53 | IG33 | 6.08 | NA% | KIF2A DIMT1L | IG24 | 6.45 | NA% |
| 35 | SNORD81 SNORD47 | IG45 | 6.03 | NA% | NARG2 RORA | IG9 | 6.42 | NA% |
| 36 | MAP2K1IP1 DNAJB14 | IG12 | 6.02 | NA% | DTX4 MPEG1 | IG22 | 6.40 | NA% |
| 37 | AL122127.6 IGHJ3P | IG20 | 6.01 | NA% | MAP2K1IP1 DNAJB14 | IG12 | 6.39 | NA% |
| 38 | GSTZ1 TMED8 | IG49 | 5.90 | NA% | IGHD IGHM | IG18 | 6.35 | NA% |
| 39 | CAMK4 STARD4 | IG7 | 5.90 | NA% | GTF3A MTIF3 | IG24 | 6.34 | NA% |
| 40 | AP000753.4 ATL3 | IG48 | 5.90 | NA% | DOPEY1 PGM3 | IG31 | 6.34 | NA% |
| 41 | GTF3A MTIF3 | IG24 | 5.87 | NA% | USP14 THOC1 | IG4 | 6.33 | NA% |
| 42 | AC117834.6 C8orf83 | IG43 | 5.87 | NA% | NEK6 PSMB7 | IG42 | 6.31 | NA% |
| 43 | PIAS1 CALML4 | IG27 | 5.85 | NA% | SNORD28 SNORD27 | IG30 | 6.30 | NA% |
| 44 | SNORD24 SNORD75 | IG2 | 5.85 | NA% | NOL7 RANBP9 | IG34 | 6.28 | NA% |
| 45 | PLXNC1 CCDC41 | IG14 | 5.83 | NA% | SNORD79 SNORD78 | IG48 | 6.27 | NA% |
| 46 | MFSD4 ELK4 | IG20 | 5.81 | NA% | PIAS1 CALML4 | IG27 | 6.15 | NA% |
| 47 | AC100778.5 SNORD58 | IG27 | 5.80 | NA% | CAMK4 STARD4 | IG7 | 6.14 | NA% |
| 48 | CFLAR AC007283.3 | IG15 | 5.77 | NA% | AC097484.3 PPM1K | IG11 | 6.14 | NA% |
| 49 | RP11-11N7.2 HNRNPU | IG3 | 5.74 | NA% | RAD9B PPTC7 | IG17 | 6.13 | NA% |
| 50 | AC032027.7 IMPAD1 | IG50 | 5.73 | NA% | KIAA1618 RNF213 | IG11 | 6.13 | NA% |
| 51 | KCNAB1 SSR3 | IG40 | 5.73 | NA% | TBCE B3GALNT2 | IG13 | 6.13 | NA% |
| 52 | AL122127.6 AL122127.6 | IG22 | 5.72 | NA% | AL513007.5 RNF12 | IG37 | 6.12 | NA% |
| 53 | TBCE B3GALNT2 | IG13 | 5.71 | NA% | NOL5A IDH3B | IG46 | 6.11 | NA% |
| 54 | AL513007.5 RNF12 | IG37 | 5.71 | NA% | AC012652.1 OIP5 | IG44 | 6.07 | NA% |
| 55 | NOL7 RANBP9 | IG34 | 5.68 | NA% | SNORD44 SNORD77 | IG50 | 6.07 | NA% |
| 56 | KIF2A DIMT1L | IG24 | 5.68 | NA% | DOK6 CD226 | IG34 | 6.06 | NA% |
| 57 | RAB14 | IG51 | 5.67 | NA% | GPR137C ERO1L | IG16 | 6.05 | NA% |
| 58 | GATC SFRS9 | IG7 | 5.66 | NA% | RP11-11N7.2 HNRNPU | IG3 | 6.00 | NA% |
| 59 | PDHA1 MAP3K15 | IG3 | 5.64 | NA% | TMEM126A CREBZF | IG13 | 5.99 | NA% |
| 60 | NFATC3 RBM35B | IG20 | 5.64 | NA% | UQCRC2 C16orf65 | IG34 | 5.98 | NA% |
| 61 | EXOSC9 CCNA2 | IG29 | 5.64 | NA% | IAH1 ADAM17 | IG42 | 5.97 | NA% |
| 62 | NARG2 RORA | IG9 | 5.63 | NA% | hsa-mir-21 U6 | IG17 | 5.95 | NA% |
| 63 | AC012360.7 TGFBRAP1 | IG16 | 5.62 | NA% | AC117834.6 C8orf83 | IG43 | 5.93 | NA% |
| 64 | AL159167.23 AL159167.23 | IG25 | 5.61 | NA% | EIF2AK4 SRP14 | IG10 | 5.93 | NA% |
| 65 | GLS STAT1 | IG12 | 5.61 | NA% | SYNCRIP | IG1 | 5.90 | NA% |
| 66 | SFT2D2 AL009051.1 | IG22 | 5.60 | NA% | PCBP2 MAP3K12 | IG6 | 5.90 | NA% |
| 67 | SNORD79 SNORD78 | IG48 | 5.59 | NA% | SNORD31 SNORD30 | IG27 | 5.89 | NA% |
| 68 | PSTK IKZF5 | IG13 | 5.53 | NA% | U6 UBXN7 | IG12 | 5.87 | NA% |
| 69 | CLEC17A AC135052.2 | IG17 | 5.52 | NA% | SNORD78 SNORD44 | IG49 | 5.87 | NA% |
| 70 | TPCN1 | IG1 | 5.47 | NA% | AC100778.5 SNORD58 | IG27 | 5.84 | NA% |
| 71 | AC004386.1 hsa-mir-421 | IG23 | 5.46 | NA% | MPHOSPH8 AL354808.24 | IG48 | 5.78 | NA% |
| 72 | VEZF1 SFRS1 | IG36 | 5.46 | NA% | PDHA1 MAP3K15 | IG3 | 5.77 | NA% |
| 73 | DOPEY1 PGM3 | IG31 | 5.45 | NA% | AP000893.5 RAB30 | IG5 | 5.73 | NA% |
| 74 | U6 UBXN7 | IG12 | 5.45 | NA% | AL122127.6 AL122127.6 | IG27 | 5.72 | NA% |
| 75 | HMBOX1 KIF13B | IG26 | 5.43 | NA% | AC010834.19 RBM12B | IG47 | 5.69 | NA% |
| 76 | IGHD IGHM | IG18 | 5.41 | NA% | AC069257.28 PCYT1A | IG8 | 5.69 | NA% |
| 77 | MTHFD2 SLC4A5 | IG4 | 5.40 | NA% | SNORD30 SNORD29 | IG28 | 5.66 | NA% |
| 78 | MRPS22 COPB2 | IG34 | 5.37 | NA% | NFATC3 RBM35B | IG20 | 5.65 | NA% |
| 79 | PSMA3 AL132989.5 | IG14 | 5.31 | NA% | TM6SF1 AC024270.6 | IG7 | 5.65 | NA% |
| 80 | KIAA1618 RNF213 | IG11 | 5.30 | NA% | MRPS22 COPB2 | IG34 | 5.64 | NA% |
| 81 | CHRAC1 EIF2C2 | IG41 | 5.30 | NA% | RP11-269F19.7 U5 | IG26 | 5.61 | NA% |
| 82 | RAD9B PPTC7 | IG17 | 5.28 | NA% | hsa-mir-29a hsa-mir-29b-1 | IG12 | 5.61 | NA% |
| 83 | U4 | IG1 | 5.27 | NA% | PXK PDHB | IG25 | 5.57 | NA% |
| 84 | USP14 THOC1 | IG4 | 5.24 | NA% | KCNAB1 SSR3 | IG40 | 5.54 | NA% |
| 85 | INVS TEX10 | IG29 | 5.22 | NA% | AL161652.25 IDE | IG42 | 5.54 | NA% |
| 86 | MLL TTC36 | IG6 | 5.21 | NA% | AL159167.23 AL159167.23 | IG25 | 5.52 | NA% |
| 87 | SNORD29 SNORD28 | IG29 | 5.21 | NA% | GSTZ1 TMED8 | IG49 | 5.51 | NA% |
| 88 | PINK1 DDOST | IG48 | 5.21 | NA% | EMG1 LPCAT3 | IG44 | 5.50 | NA% |
| 89 | NPFF ATF7 | IG9 | 5.20 | NA% | MFSD4 ELK4 | IG20 | 5.49 | NA% |
| 90 | RP11-764K9.2 RP11-764K9.4 | IG34 | 5.20 | NA% | D87023.1 D87023.1 | IG20 | 5.48 | NA% |
| 91 | HIPK3 AL122015.17 | IG30 | 5.20 | NA% | CCDC66 C3orf63 | IG2 | 5.48 | NA% |
| 92 | UQCRC2 C16orf65 | IG34 | 5.20 | NA% | KSR1 LGALS9 | IG50 | 5.47 | NA% |
| 93 | U6atac AC011816.17 | IG40 | 5.18 | NA% | ELK3 PCTK2 | IG38 | 5.46 | NA% |
| 94 | SNORD22 SNORD31 | IG26 | 5.18 | NA% | VEZF1 SFRS1 | IG36 | 5.45 | NA% |
| 95 | UGDH C4orf34 | IG31 | 5.18 | NA% | CHRAC1 EIF2C2 | IG41 | 5.44 | NA% |
| 96 | IGHJ3P AL122127.6 | IG21 | 5.17 | NA% | SLAMF7 | IG51 | 5.43 | NA% |
| 97 | MRPL17 GVIN1 | IG36 | 5.15 | NA% | INVS TEX10 | IG29 | 5.41 | NA% |
| 98 | SGPP2 FARSLB | IG3 | 5.14 | NA% | AC012360.7 TGFBRAP1 | IG16 | 5.41 | NA% |
| 99 | SAMD4B PAF1 | IG36 | 5.12 | NA% | GATC SFRS9 | IG7 | 5.37 | NA% |
| 100 | AKAP5 ZBTB25 | IG15 | 5.12 | NA% | SFT2D2 AL009051.1 | IG22 | 5.37 | NA% |