Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ARD1A	Gene	0	71.41	162.52	149.44	205.69	171.66	105.97	256.92
2	393710	Transcript	0	1.99	2.01	2.57	2.05	4.69	0.85	1.54
3	370009	Transcript	1	10.92	25.56	44.56	66.29	21.83	19.86	16.52
4	370015	Transcript	0	0	0	0	0	0	0	0
5	370011	Transcript	0	0.19	1.82	0.17	1.56	1.21	0.31	0.84
6	393712	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	6.57	5.08	7.10	6.70	14.22	0.95	5.30
8	ER1b	ExonRegion	0	47.76	42.80	60.19	72.30	127.60	34.03	78.80
9	E1_Ac	KnownBoundary	0	69.61	69.30	83.05	122.59	102.93	54.56	154.25
10	ER1c	ExonRegion	0	28.38	62.20	49.16	91.97	73.72	43.04	105.14
11	E1a_E2a	KnownJunction	0	16.27	96.68	54.55	111.32	61.99	43.42	94.72
12	ER2a	ExonRegion	0	70.46	197.53	136.07	216.56	136.86	114.17	239.36
13	E2a_E3a	KnownJunction	0	142.72	238.60	262.98	266.55	284.79	129.04	375.96
14	E3_Aa	NovelBoundary	0	68.80	95.92	125.97	104.84	81.84	48.24	143.94
15	ER3a	ExonRegion	0	167.27	270.07	327.50	331.29	377.84	182.61	421.61
16	E3a_E4a	KnownJunction	0	146.62	249.53	306.00	320.30	465.90	182.21	359.58
17	ER4a	ExonRegion	0	135.78	293.47	292.81	358.56	371.18	204.79	404.24
18	E4a_E5a	KnownJunction	0	85.77	240.54	194.32	314.50	272.90	159.46	334.25
19	ER5a	ExonRegion	0	110.83	284.79	271.40	379.40	258.66	196.32	419.43
20	E5_Da	NovelBoundary	0	16.79	37.91	23.94	41.45	11.78	31.38	9.04
21	E5a_E6a	KnownJunction	0	167.58	237.81	304.59	267.66	372.46	165.54	435.86
22	E5a_E8a	KnownJunction	1	10.92	25.56	44.56	66.29	21.83	19.86	16.52
23	ER6a	ExonRegion	0	154.47	252.50	284.32	277.52	294.64	151.15	456.34
24	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER7a	ExonRegion	0	0.38	3.64	0.34	3.12	2.43	0.61	1.69
27	ER8a	ExonRegion	0	102.99	237.24	234.82	338.18	279.17	152.92	466.11
28	E8a_E9a	KnownJunction	0	0.00	1.02	0.73	0.00	0.00	0.00	0.00
29	E8a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E8a_E9c	KnownJunction	0	65.37	204.05	184.39	277.66	240.33	126.66	413.98
31	ER9a	ExonRegion	0	0.61	1.94	2.44	1.50	3.73	2.45	0.67
32	ER9b	ExonRegion	0	1.26	5.00	4.76	4.08	6.29	3.37	8.34
33	E9_Ac	KnownBoundary	0	0.72	9.69	2.59	2.41	1.18	1.66	6.75
34	ER9c	ExonRegion	0	49.93	140.54	106.63	175.03	129.72	89.93	230.36
35	ER9d	ExonRegion	0	0.77	1.21	0.68	3.74	1.62	1.23	0.67
36	ER9e	ExonRegion	0	0.77	0.00	0.00	0.00	0.81	0.00	0.19
37	IG48_AR4	ActiveIntergenicRegion	0	4.10	6.90	14.48	14.49	5.90	3.66	6.12