Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 DDX26B Gene 0 72.45 44.26 89.01 120.35 26.46 36.41 41.64 2 356856 Transcript 0 12.17 11.80 9.43 18.34 4.33 13.37 4.77 3 370752 Transcript 0 66.05 40.34 78.87 113.48 20.77 41.54 28.57 4 ER1a ExonRegion 0 9.59 24.12 11.77 49.08 3.25 13.11 8.56 5 E1_Da NovelBoundary 1 21.30 23.78 14.83 18.12 4.36 13.51 1.91 6 E1a_E2a KnownJunction 0 11.55 18.63 13.75 39.63 5.09 16.05 9.80 7 E2_Aa NovelBoundary 0 16.49 21.15 15.45 15.01 2.90 7.83 4.92 8 ER2a ExonRegion 0 24.89 22.01 25.61 72.32 8.67 20.81 19.58 9 E2a_E3a KnownJunction 0 28.56 29.08 45.25 86.61 13.05 22.97 21.97 10 I2_SR1 SilentIntronRegion 0 11.84 3.26 19.98 8.93 1.02 2.88 3.07 11 E3_Aa NovelBoundary 1 23.57 4.47 21.90 2.44 0.90 12.86 2.26 12 ER3a ExonRegion 0 53.49 23.87 73.23 80.47 15.11 27.54 30.27 13 E3a_E4a KnownJunction 0 41.46 26.85 67.68 65.07 13.74 26.16 27.24 14 I3 Intron 0 15.86 3.42 19.36 6.22 0.61 1.85 2.41 15 I3_SR1 SilentIntronRegion 0 12.79 1.40 18.24 2.99 0.14 1.85 2.67 16 I3_AR1 ActiveIntronRegion 0 19.54 4.58 20.65 9.79 0.89 2.46 2.74 17 E4_Aa NovelBoundary 1 8.51 4.05 23.78 10.84 0.00 0.00 2.98 18 ER4a ExonRegion 0 45.33 40.71 74.72 70.48 28.49 19.63 36.52 19 E4a_E5a KnownJunction 0 43.09 51.28 74.52 97.12 21.37 21.71 38.25 20 ER5a ExonRegion 0 34.55 45.17 60.69 84.58 19.15 22.19 37.89 21 E5a_E6a KnownJunction 0 29.11 45.37 50.27 90.05 26.33 27.20 42.35 22 E5a_E7a NovelJunction 0 3.66 3.99 5.39 16.80 0.00 3.38 1.95 23 ER6a ExonRegion 0 44.53 37.45 71.69 94.02 23.93 22.15 45.54 24 E6a_E7a KnownJunction 0 34.16 26.77 79.48 102.89 38.08 32.37 47.80 25 ER7a ExonRegion 0 55.11 44.53 93.33 107.27 31.10 30.28 53.07 26 E7a_E8a KnownJunction 1 30.99 46.97 74.35 94.01 19.30 16.67 37.29 27 I7 Intron 0 14.13 3.97 21.79 13.57 0.56 1.18 2.88 28 I7_SR1 SilentIntronRegion 0 14.05 3.99 18.81 15.92 0.33 0.89 1.97 29 I7_SR2 SilentIntronRegion 0 14.47 3.79 25.75 13.01 0.70 1.63 3.54 30 ER8a ExonRegion 0 64.48 53.33 96.77 124.26 34.01 21.85 55.40 31 E8a_E9a KnownJunction 0 55.49 56.25 70.44 140.01 14.48 27.66 39.73 32 ER9a ExonRegion 0 70.66 51.91 77.86 121.92 23.21 35.97 49.50 33 E9_Da NovelBoundary 1 28.41 0.00 30.92 13.38 0.00 0.00 2.04 34 E9a_E10a KnownJunction 0 41.77 40.59 62.24 77.91 21.88 31.14 38.95 35 E9a_E11a NovelJunction 1 49.95 0.00 40.47 1.60 0.00 0.00 0.00 36 I9 Intron 0 23.55 2.78 24.45 8.22 1.09 1.82 4.42 37 I9_SR1 SilentIntronRegion 0 23.56 2.78 24.46 8.22 1.09 1.83 4.42 38 E10_Aa NovelBoundary 1 10.28 1.63 26.01 4.17 2.12 6.65 5.62 39 ER10a ExonRegion 0 40.16 24.43 58.15 68.96 22.57 26.95 32.40 40 E10_Da NovelBoundary 0 49.12 15.21 40.91 16.93 8.58 7.40 20.67 41 E10a_E11a KnownJunction 0 1.75 3.13 14.24 18.99 2.84 11.63 3.20 42 I10 Intron 0 61.65 13.58 67.52 34.34 6.63 9.47 21.88 43 I10_SR1 SilentIntronRegion 0 57.43 15.88 61.92 26.19 3.91 7.11 17.63 44 I10_AR1 ActiveIntronRegion 0 39.74 6.07 51.00 28.50 0.00 3.68 12.34 45 I10_AR2 ActiveIntronRegion 0 53.58 10.08 65.85 31.78 5.55 7.85 20.67 46 I10_SR2 SilentIntronRegion 0 58.43 14.19 66.98 41.45 8.56 12.29 25.91 47 I10_AR3 ActiveIntronRegion 0 66.48 14.55 69.54 35.98 7.36 10.21 22.67 48 E11_Aa NovelBoundary 0 26.79 13.90 33.64 34.54 7.24 11.20 14.16 49 ER11a ExonRegion 1 139.15 43.58 146.37 107.94 29.40 35.83 40.54 50 E11a_E12a KnownJunction 0 140.83 52.94 129.43 109.07 33.27 41.67 51.06 51 ER12a ExonRegion 0 131.42 51.92 136.45 166.40 35.04 50.28 63.11 52 E12a_E13a KnownJunction 0 105.26 49.42 116.26 174.09 37.53 44.70 56.19 53 ER13a ExonRegion 0 91.73 63.44 113.53 169.97 38.65 48.38 77.66 54 E13a_E14a KnownJunction 0 124.91 53.12 131.13 156.40 39.37 61.85 68.53 55 E13a_E15a NovelJunction 1 1.64 4.02 8.90 23.19 1.15 1.66 0.59 56 ER14a ExonRegion 0 71.98 43.55 87.54 146.47 29.61 43.95 56.17 57 E14_Da NovelBoundary 0 24.20 13.61 34.52 52.48 0.00 12.06 6.41 58 E14a_E15a KnownJunction 0 24.80 27.80 37.25 134.05 17.01 27.23 23.27 59 I14 Intron 1 31.66 11.06 45.26 37.90 2.51 5.78 4.98 60 I14_AR1 ActiveIntronRegion 1 33.11 11.60 47.23 39.71 2.67 5.92 5.18 61 E15_Aa NovelBoundary 1 35.92 20.05 39.10 68.22 1.84 8.31 3.94 62 ER15a ExonRegion 0 112.84 74.38 137.35 212.42 45.63 56.89 64.31 63 E15_Da NovelBoundary 1 18.34 6.36 38.37 19.02 1.15 6.41 1.68 64 E15a_E16a KnownJunction 0 223.91 79.94 198.80 200.64 43.27 76.67 86.55 65 I15 Intron 1 10.47 3.63 21.81 10.97 1.08 3.18 1.62 66 I15_SR1 SilentIntronRegion 1 10.53 3.65 21.91 11.02 1.09 3.20 1.63 67 E16_Aa NovelBoundary 1 14.79 2.23 27.95 9.75 1.15 1.37 0.73 68 ER16a ExonRegion 0 137.62 65.12 142.26 178.61 47.50 55.87 61.47 69 E16_Da NovelBoundary 1 13.15 7.22 26.47 7.53 0.00 0.00 1.89 70 E16a_E17a KnownJunction 0 114.94 37.96 140.87 169.35 24.85 46.50 61.18 71 I16 Intron 0 14.81 6.28 21.23 16.28 1.57 4.32 2.51 72 I16_SR1 SilentIntronRegion 0 14.89 6.31 21.34 16.37 1.58 4.34 2.53 73 ER17a ExonRegion 0 134.23 44.13 153.84 172.52 45.64 50.23 60.60 74 E17_Da KnownBoundary 0 144.18 36.73 175.75 138.73 55.23 35.43 53.76 75 E17a_E17b KnownJunction 0 12.17 11.80 9.43 18.34 4.33 13.37 4.77 76 ER17b ExonRegion 0 94.27 41.60 110.96 130.01 30.64 46.89 38.28 77 E17_Ab KnownBoundary 0 63.04 39.41 104.72 138.06 29.05 49.04 32.48 78 ER17c ExonRegion 0 59.51 52.36 85.30 159.65 29.06 52.07 35.44 79 E17_Db KnownBoundary 0 53.31 57.32 61.86 158.18 25.63 43.79 30.98 80 ER17d ExonRegion 0 37.83 39.09 46.78 96.95 10.91 36.18 18.85