Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PCTK1	Gene	0	226.77	377.92	174.01	263.25	321.74	206.99	638.58
2	276052	Transcript	1	66.62	43.55	18.67	16.26	44.25	17.26	48.25
3	357227	Transcript	0	26.15	159.84	21.02	105.73	19.56	104.56	92.44
4	IG20	Intergenic	0	5.88	5.26	7.06	11.50	1.67	10.16	3.75
5	IG20_AR1	ActiveIntergenicRegion	0	7.16	1.81	7.80	11.39	0.65	8.96	2.40
6	IG20_SR1	SilentIntergenicRegion	0	10.10	7.42	14.20	12.70	2.52	18.54	4.54
7	IG20_AR2	ActiveIntergenicRegion	0	8.67	9.37	13.35	12.11	2.43	17.86	4.82
8	IG20_SR2	SilentIntergenicRegion	0	9.56	7.51	11.19	10.93	1.31	14.31	5.98
9	IG20_SR3	SilentIntergenicRegion	0	6.30	5.82	7.62	13.38	1.91	10.88	4.10
10	ER1a	ExonRegion	1	69.34	41.04	22.37	16.54	58.34	18.73	52.28
11	E1a_E3a	KnownJunction	1	63.91	46.05	14.97	15.98	30.15	15.79	44.23
12	ER2a	ExonRegion	0	13.00	88.07	9.04	66.92	14.23	53.38	62.60
13	E2a_E3a	KnownJunction	0	39.30	231.61	33.01	144.53	24.90	155.73	122.28
14	ER3a	ExonRegion	0	172.92	551.53	154.26	341.98	262.80	308.72	626.67
15	E3a_E4a	KnownJunction	0	287.33	672.26	269.87	425.19	268.57	354.32	892.09
16	E3a_E5a	NovelJunction	0	2.40	2.60	3.51	6.83	0.00	8.42	0.00
17	E4_Aa	NovelBoundary	1	137.07	14.90	110.75	11.62	2.28	20.31	7.98
18	ER4a	ExonRegion	0	300.60	814.43	258.85	467.79	427.10	447.09	1065.22
19	E4a_E5a	KnownJunction	0	225.31	648.46	212.85	349.26	425.35	301.44	822.24
20	ER5a	ExonRegion	0	377.52	809.07	331.16	480.44	521.83	408.26	1120.98
21	E5a_E6a	KnownJunction	0	486.83	833.67	359.07	467.00	329.77	409.31	1217.24
22	ER6a	ExonRegion	0	475.46	880.24	366.95	500.16	537.53	452.84	1246.27
23	E6a_E7a	KnownJunction	0	389.98	767.86	299.77	468.00	783.50	402.72	1034.81
24	ER7a	ExonRegion	0	612.05	997.06	462.49	574.51	851.08	476.16	1582.69
25	E7a_E8a	KnownJunction	0	760.69	1072.95	519.95	623.42	1021.03	568.37	1939.66
26	E7a_E9a	NovelJunction	0	2.70	12.30	6.39	25.44	1.13	9.62	0.64
27	ER8a	ExonRegion	0	684.73	1015.17	477.40	602.85	889.40	501.47	1762.24
28	E8a_E9a	KnownJunction	0	637.87	973.49	452.46	525.32	847.86	438.58	1590.74
29	ER9a	ExonRegion	0	490.65	816.44	393.38	467.53	968.61	378.60	1605.84
30	E9_Da	NovelBoundary	1	147.76	119.98	58.82	58.76	12.77	55.05	34.61
31	E9a_E10a	KnownJunction	0	313.42	630.91	281.10	378.38	772.82	285.98	1420.37
32	E9a_E11a	NovelJunction	0	27.15	65.68	11.21	71.39	5.56	57.00	35.84
33	I9	Intron	0	101.17	70.05	52.80	49.36	8.83	44.80	19.92
34	I9_AR1	ActiveIntronRegion	0	101.91	70.56	53.20	49.72	8.90	45.14	20.07
35	E10_Aa	NovelBoundary	1	83.70	95.18	53.44	72.55	8.51	83.19	27.40
36	ER10a	ExonRegion	0	325.92	652.47	302.38	390.88	684.08	304.42	1271.84
37	E10_Da	NovelBoundary	1	121.80	50.23	47.09	35.71	3.14	39.56	41.93
38	E10a_E11a	KnownJunction	0	270.71	512.87	300.05	342.70	746.59	265.21	1094.13
39	I10	Intron	0	64.74	56.29	24.49	40.94	5.24	39.78	27.79
40	I10_AR1	ActiveIntronRegion	0	65.37	56.87	24.73	41.34	5.30	40.21	28.09
41	E11_Aa	NovelBoundary	1	129.48	81.44	56.14	56.00	11.41	45.72	42.61
42	ER11a	ExonRegion	0	345.10	644.76	329.31	436.41	658.94	318.46	1193.58
43	E11a_E12a	KnownJunction	0	322.18	577.47	246.31	419.56	358.45	318.68	1060.27
44	E11a_E13a	NovelJunction	1	2.75	1.37	0.00	10.40	1.08	0.00	3.90
45	ER12a	ExonRegion	0	278.67	598.14	244.60	435.50	417.94	306.74	875.77
46	E12a_E13a	KnownJunction	0	310.97	623.32	276.53	447.71	495.77	321.73	892.89
47	ER13a	ExonRegion	0	350.47	659.48	317.81	498.18	519.07	368.59	1148.21
48	E13a_E14a	KnownJunction	0	223.55	504.04	201.41	371.50	385.97	263.25	621.75
49	ER14a	ExonRegion	0	275.53	595.68	221.33	417.18	427.00	279.13	809.01
50	E14a_E15a	KnownJunction	0	284.78	551.07	215.04	365.70	527.68	274.64	851.13
51	E14a_E16a	NovelJunction	0	6.79	5.52	7.44	17.37	0.00	13.40	2.14
52	ER15a	ExonRegion	0	382.82	674.63	332.15	480.96	671.40	361.93	1244.57
53	E15a_E16a	KnownJunction	0	387.21	679.85	351.90	501.86	831.93	387.28	1188.45
54	ER16a	ExonRegion	0	489.63	661.54	363.96	526.51	701.84	399.14	1282.19
55	E16a_E17a	KnownJunction	0	601.59	633.48	378.23	552.77	418.13	401.59	1421.35
56	ER17a	ExonRegion	0	174.09	176.32	116.90	177.78	208.31	123.17	413.65