Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SAT1 Gene 0 9041.01 10116.81 3749.24 2558.06 188.81 5858.54 2378.23 2 379251 Transcript 0 254.25 655.26 122.52 184.33 6.62 392.76 95.76 3 379253 Transcript 1 2933.86 1457.42 1627.88 696.77 6.53 1163.50 513.73 4 379254 Transcript 1 8.28 8.33 8.28 18.80 2.14 46.63 2.24 5 379270 Transcript 0 4912.85 9324.23 2182.01 1692.55 134.52 4915.86 1810.33 6 342463 Transcript 0 2014.69 3183.06 1009.76 768.64 42.30 1701.20 760.13 7 IG33_SR2 SilentIntergenicRegion 0 3.52 4.21 3.43 4.26 0.00 8.92 0.50 8 ER1a ExonRegion 1 4940.88 7610.84 2127.87 1915.66 228.54 3267.02 2759.24 9 E1_Ab KnownBoundary 0 3109.95 3376.59 1148.51 844.57 138.66 2006.26 699.47 10 ER1b ExonRegion 0 5085.05 13111.04 2436.58 2980.49 109.54 6908.18 2478.29 11 E1a_E2a KnownJunction 0 11189.53 14360.91 5094.73 3566.62 253.00 8181.78 4457.17 12 ER2a ExonRegion 0 10370.05 19203.64 5160.58 4450.96 468.53 11235.58 4690.65 13 E2_Da KnownBoundary 0 184.59 382.38 91.25 126.71 0.90 250.50 65.21 14 E2a_E2b KnownJunction 0 9849.45 19389.32 4720.64 4316.29 628.51 11958.30 3854.84 15 E2a_E3a KnownJunction 0 8.28 8.33 8.28 18.80 2.14 46.63 2.24 16 ER2b ExonRegion 0 254.25 655.26 122.52 184.33 6.62 392.76 95.76 17 E2_Ab KnownBoundary 0 241.49 451.42 116.01 134.99 1.08 294.48 67.76 18 ER2c ExonRegion 0 9920.83 19117.89 4974.70 4026.07 302.06 10431.01 3811.72 19 E2_Db KnownBoundary 0 1444.83 836.88 899.34 386.73 4.01 632.50 195.52 20 E2b_E3a KnownJunction 0 8327.96 15451.18 3451.58 2640.14 238.67 7446.88 2953.83 21 ER2d ExonRegion 1 1283.34 775.99 810.43 416.06 7.18 545.90 198.16 22 E2_Dc KnownBoundary 0 1180.23 561.74 773.86 355.71 11.96 392.78 190.55 23 E2c_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER2e ExonRegion 1 2350.89 725.66 1413.29 424.83 5.73 606.39 268.96 25 E2_Dd KnownBoundary 1 3586.18 835.09 2124.44 472.58 10.77 743.43 382.22 26 ER2f ExonRegion 1 2933.86 1457.42 1627.88 696.77 6.53 1163.50 513.73 27 E2_De NovelBoundary 1 3385.17 757.35 1986.76 349.96 5.33 692.77 404.93 28 I2 Intron 0 2937.80 710.14 1246.52 417.89 7.40 530.27 278.03 29 I2_AR1 ActiveIntronRegion 0 2944.06 711.60 1249.13 418.75 7.41 531.34 278.61 30 E3_Aa NovelBoundary 0 1979.23 804.83 1249.18 484.09 6.87 655.98 330.84 31 E3_Ab NovelBoundary 0 12393.76 20324.79 6078.77 4859.28 331.62 11179.98 4570.65 32 ER3a ExonRegion 0 9662.93 17312.85 4352.39 3396.73 293.30 8616.80 3548.70 33 ER3b ExonRegion 0 10605.00 19235.24 5466.49 4494.23 293.12 10306.86 4193.78 34 E3a_E4a KnownJunction 0 0.00 1.50 0.85 0.00 0.00 0.00 0.00 35 E3a_E4b KnownJunction 0 8311.25 16375.22 4511.78 3978.14 293.21 9033.45 3600.94 36 ER4a ExonRegion 0 5452.83 9719.46 2911.05 2334.94 149.82 5216.62 2263.26 37 ER4b ExonRegion 0 11916.22 19320.42 6255.74 4639.35 340.44 10316.64 4802.16 38 E4a_E5a KnownJunction 0 10340.02 14135.14 5132.15 3489.60 401.12 7541.67 3755.48 39 E5a_E5b KnownJunction 0 2605.95 3011.28 1127.12 739.64 19.36 1588.18 777.26 40 ER5a ExonRegion 0 14492.87 19301.10 6823.79 4662.52 457.89 10215.80 5095.94 41 E5_Ac KnownBoundary 0 17921.67 18947.93 7030.60 4561.79 567.38 9934.73 4678.61 42 ER5b ExonRegion 0 15568.78 19263.18 7000.76 4598.80 517.23 10082.60 4995.36 43 ER5c ExonRegion 0 16754.76 19379.47 7174.76 4588.89 544.36 10074.02 4963.69 44 ER5d ExonRegion 0 18174.03 19381.02 7296.55 4591.73 524.51 10060.94 4824.69 45 ER5e ExonRegion 0 23501.03 18998.17 8072.66 4816.30 455.44 10274.00 4741.07 46 E5_Dc KnownBoundary 0 23906.48 19351.09 8130.64 5342.96 467.33 11288.09 4761.69 47 ER5f ExonRegion 0 22573.56 18677.73 7897.82 4956.29 382.96 11893.43 4271.51 48 E5_Dd KnownBoundary 0 3003.00 5298.29 1310.17 1277.21 42.83 3500.18 844.95 49 ER5g ExonRegion 0 1497.73 3197.28 912.44 744.97 30.37 2384.84 666.82 50 IG34_AR1 ActiveIntergenicRegion 0 14.03 1.66 12.98 8.14 0.00 10.45 1.10 51 IG34_SR1 SilentIntergenicRegion 0 29.63 5.22 28.93 11.66 0.00 21.24 1.35 52 IG34_AR2 ActiveIntergenicRegion 0 37.51 6.07 44.09 12.47 0.00 27.08 1.35 53 IG34_SR2 SilentIntergenicRegion 0 25.31 5.00 28.37 6.35 0.00 21.42 0.18