Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZFX	Gene	0	136.09	87.77	144.36	78.10	34.64	117.75	74.44
2	379177	Transcript	0	16.09	9.29	19.41	9.33	5.60	12.90	12.65
3	304543	Transcript	0	0	0	0	0	0	0	0
4	379188	Transcript	0	0	0	0	0	0	0	0
5	313152	Transcript	0	1.17	0.00	0.50	0.00	0.00	0.00	0.00
6	338565	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	4.79	2.24	3.76	2.11	1.06	1.17	1.91
8	E1a_E2b	KnownJunction	0	9.58	5.33	15.72	6.47	1.11	2.95	2.54
9	E1a_E5a	NovelJunction	0	44.31	23.22	27.91	33.97	0.00	36.31	14.73
10	ER1b	ExonRegion	0	7.11	4.86	7.28	3.74	2.43	2.45	2.02
11	I1_SR2	SilentIntronRegion	1	36.90	1.43	24.52	8.25	0.52	3.93	2.56
12	ER2a	ExonRegion	0	1.92	2.02	2.94	0.62	0.40	1.63	1.01
13	ER2b	ExonRegion	0	11.89	8.79	22.81	6.66	3.12	11.12	4.86
14	E2a_E3a	KnownJunction	1	13.12	8.07	37.82	10.10	5.33	11.77	8.18
15	ER3a	ExonRegion	1	25.98	26.02	62.63	17.31	13.30	11.92	26.92
16	E3a_E4a	KnownJunction	0	6.04	6.96	15.88	3.17	3.34	4.98	8.25
17	E3a_E5a	KnownJunction	1	21.83	20.05	53.50	14.68	10.21	17.88	18.40
18	ER4a	ExonRegion	0	19.35	9.29	22.77	9.07	3.13	6.02	11.51
19	E4a_E5a	KnownJunction	1	10.21	8.85	25.65	13.06	0.90	14.66	14.12
20	E4a_E6a	NovelJunction	0	2.74	7.70	6.81	4.88	0.00	8.04	4.16
21	ER5a	ExonRegion	0	61.01	70.81	108.78	48.12	16.39	72.16	46.83
22	E5a_E6a	KnownJunction	0	50.35	96.76	98.08	60.28	14.55	85.01	43.48
23	ER6a	ExonRegion	0	208.75	200.67	237.32	159.20	56.08	185.24	144.92
24	E6a_E7a	KnownJunction	0	160.72	187.03	219.49	164.09	73.03	162.49	130.89
25	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E6a_E10a	KnownJunction	0	1.17	0.00	0.50	0.00	0.00	0.00	0.00
27	ER7a	ExonRegion	0	162.60	171.61	213.75	145.70	46.22	173.79	114.74
28	E7a_E8a	KnownJunction	0	97.49	105.53	124.30	78.13	13.81	103.74	67.46
29	ER8a	ExonRegion	0	153.35	171.61	206.30	146.52	43.33	170.29	113.82
30	E8a_E9a	KnownJunction	0	146.05	164.54	180.41	141.85	41.20	127.94	107.18
31	ER9a	ExonRegion	0	103.38	146.66	112.91	109.85	28.67	134.56	72.03
32	E9_Da	NovelBoundary	1	68.18	1.52	82.64	0.00	0.00	4.69	1.42
33	E9a_E10a	KnownJunction	0	123.54	90.77	144.91	90.13	29.35	90.02	74.87
34	ER10a	ExonRegion	0	258.52	158.87	243.64	121.83	42.15	165.95	129.03
35	E10a_E11a	KnownJunction	0	219.51	163.22	204.43	125.51	29.53	129.34	93.37
36	ER11a	ExonRegion	0	200.83	139.07	219.02	123.66	50.07	177.60	113.71
37	E11_Da	KnownBoundary	0	97.90	32.24	154.94	23.38	23.84	59.17	39.30
38	ER11b	ExonRegion	0	129.58	55.48	172.51	50.44	26.60	76.83	51.87
39	E11_Db	KnownBoundary	0	184.32	73.40	187.46	74.23	39.01	104.01	54.34
40	ER11c	ExonRegion	0	155.44	72.70	155.07	71.59	34.76	130.02	69.80
41	E11_Dc	KnownBoundary	0	21.31	13.45	27.40	24.98	19.94	25.11	25.95
42	ER11d	ExonRegion	0	40.05	19.08	28.99	19.24	19.59	37.64	27.44