Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	VPS13A	Gene	0	74.32	18.84	147.10	77.67	70.56	36.57	71.11
2	376634	Transcript	1	25.50	10.18	55.94	27.29	35.41	4.78	15.41
3	355766	Transcript	0	0	0	0	0	0	0	0
4	357409	Transcript	0	26.08	8.38	59.63	41.42	38.96	26.05	16.78
5	376636	Transcript	0	2.64	0.00	6.68	1.25	1.94	0.00	3.38
6	360280	Transcript	0	0	0	0	0	0	0	0
7	376646	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	12.11	9.38	19.86	31.68	5.37	11.02	9.28
9	E1a_E2a	KnownJunction	0	42.03	27.22	59.75	74.88	18.88	16.88	21.67
10	ER2a	ExonRegion	0	49.04	29.43	78.75	91.51	15.66	29.79	35.51
11	E2a_E3a	KnownJunction	0	37.25	18.34	63.34	67.19	18.60	23.13	35.05
12	ER3a	ExonRegion	0	49.20	30.88	118.07	93.84	23.11	33.53	48.92
13	E3_Da	NovelBoundary	1	24.37	0.00	56.02	0.00	0.00	0.00	0.85
14	E3a_E4a	KnownJunction	0	47.08	31.16	123.66	82.87	28.52	29.32	39.34
15	ER4a	ExonRegion	0	67.90	32.75	160.55	84.94	26.53	45.55	45.00
16	E4a_E5a	KnownJunction	0	59.10	26.19	138.44	72.28	24.62	55.85	42.69
17	ER5a	ExonRegion	0	83.03	23.51	200.62	83.17	29.00	60.00	52.53
18	E5a_E6a	KnownJunction	1	112.06	16.50	277.91	70.41	51.45	84.61	60.95
19	ER6a	ExonRegion	1	104.72	22.47	253.59	102.59	43.95	78.58	58.20
20	E6a_E7a	KnownJunction	1	73.34	21.41	175.19	93.38	55.12	66.14	36.59
21	ER7a	ExonRegion	1	68.74	22.33	148.38	84.96	43.31	47.59	30.66
22	E7a_E8a	KnownJunction	1	45.66	21.04	114.24	65.94	37.07	25.41	22.30
23	I7	Intron	0	20.04	3.53	34.03	13.36	5.92	4.73	11.76
24	I7_SR1	SilentIntronRegion	0	20.07	3.54	34.09	13.38	5.93	4.74	11.78
25	E8_Aa	NovelBoundary	0	29.47	8.43	69.94	30.37	19.02	15.52	29.12
26	ER8a	ExonRegion	0	92.85	29.91	199.76	122.43	76.54	38.50	66.12
27	E8a_E9a	KnownJunction	0	140.21	27.66	260.33	154.15	71.00	56.90	105.79
28	ER9a	ExonRegion	0	102.99	36.54	231.08	160.44	53.55	78.07	92.33
29	E9a_E10a	KnownJunction	0	55.16	52.12	153.52	144.69	47.51	74.05	65.59
30	ER10a	ExonRegion	0	80.65	43.55	187.60	134.05	47.68	57.66	76.18
31	E10a_E11a	KnownJunction	0	116.31	34.07	232.87	135.81	37.99	64.45	97.61
32	ER11a	ExonRegion	0	96.40	33.86	213.75	128.18	63.79	58.20	104.82
33	E11a_E12a	KnownJunction	0	60.35	12.95	134.92	88.80	37.65	44.76	57.73
34	ER12a	ExonRegion	0	61.86	12.64	140.48	93.71	32.31	29.64	63.51
35	E12a_E13a	KnownJunction	1	81.23	10.48	157.76	105.44	39.86	37.17	89.56
36	ER13a	ExonRegion	0	71.03	10.60	154.38	82.27	30.92	29.66	60.60
37	E13a_E14a	KnownJunction	0	55.43	10.35	112.62	49.85	22.85	22.97	44.00
38	ER14a	ExonRegion	0	51.77	14.19	114.31	57.78	31.20	26.70	48.76
39	E14_Da	NovelBoundary	1	18.69	0.00	40.77	0.00	0.00	0.00	0.00
40	E14a_E15a	KnownJunction	0	50.92	17.13	122.90	67.48	30.59	28.51	50.13
41	ER15a	ExonRegion	0	52.31	19.90	124.75	76.99	25.92	22.75	52.38
42	E15a_E16a	KnownJunction	1	49.70	22.20	109.19	88.07	20.77	18.68	45.96
43	ER16a	ExonRegion	0	68.37	24.80	152.69	86.37	45.81	30.26	53.95
44	E16a_E17a	KnownJunction	0	100.44	24.22	182.73	83.39	70.73	23.99	55.19
45	ER17a	ExonRegion	0	109.93	26.91	215.25	108.68	45.04	37.32	61.53
46	E17a_E18a	KnownJunction	0	108.43	22.49	217.08	99.91	55.81	34.52	80.28
47	ER18a	ExonRegion	0	88.00	18.17	173.71	79.62	41.73	29.32	70.74
48	E18a_E19a	KnownJunction	0	71.37	17.86	165.20	82.06	34.58	25.46	86.10
49	ER19a	ExonRegion	0	74.67	23.48	149.85	75.24	44.40	25.79	68.09
50	E19a_E20a	KnownJunction	0	73.14	16.21	161.54	73.82	42.58	42.34	62.91
51	ER20a	ExonRegion	0	78.75	24.11	166.09	72.83	47.65	23.37	60.94
52	E20a_E21a	KnownJunction	1	89.36	15.95	145.90	71.47	46.66	19.91	41.89
53	ER21a	ExonRegion	0	88.02	21.12	160.23	75.70	52.77	19.89	62.01
54	E21_Da	NovelBoundary	1	49.47	0.00	70.33	0.00	0.00	1.66	0.00
55	E21a_E22a	KnownJunction	0	127.98	25.64	184.86	75.91	62.75	23.74	71.43
56	ER22a	ExonRegion	0	154.34	23.78	208.13	86.97	80.69	35.52	81.64
57	E22a_E23a	KnownJunction	0	137.06	21.46	218.82	85.01	72.02	40.44	72.63
58	ER23a	ExonRegion	0	142.91	18.19	200.44	87.06	70.07	38.37	76.52
59	E23a_E24a	KnownJunction	0	80.56	6.78	146.51	47.95	59.64	22.38	41.69
60	ER24a	ExonRegion	0	74.38	10.12	141.14	57.96	37.57	24.16	47.13
61	E24a_E25a	KnownJunction	0	63.00	11.09	120.65	70.19	21.65	19.22	48.30
62	ER25a	ExonRegion	0	71.85	13.33	155.81	65.56	37.79	28.21	60.82
63	E25a_E26a	KnownJunction	0	74.17	14.63	153.76	77.29	38.45	29.10	63.43
64	ER26a	ExonRegion	0	76.84	20.91	180.30	77.68	45.25	27.15	72.10
65	E26a_E27a	KnownJunction	0	83.17	27.72	182.86	62.28	54.57	21.06	73.10
66	ER27a	ExonRegion	0	100.57	23.04	192.44	72.64	49.62	20.06	85.31
67	E27a_E28a	KnownJunction	0	79.53	19.70	168.43	71.20	36.91	19.94	72.69
68	ER28a	ExonRegion	0	77.84	21.18	172.66	67.40	37.35	19.37	65.54
69	E28a_E29a	KnownJunction	0	72.23	20.73	174.23	72.82	42.07	29.05	60.44
70	ER29a	ExonRegion	0	97.99	16.79	202.80	56.84	51.92	29.12	70.78
71	E29a_E30a	KnownJunction	0	94.15	14.74	178.44	66.59	45.05	15.17	55.68
72	E29a_E31a	KnownJunction	0	2.64	0.00	6.68	1.25	1.94	0.00	3.38
73	ER30a	ExonRegion	0	96.27	17.37	207.60	77.31	48.31	24.82	63.90
74	E30a_E31a	KnownJunction	0	80.90	15.40	183.51	72.98	63.37	24.71	56.65
75	ER31a	ExonRegion	0	116.10	16.02	216.57	76.60	69.15	29.93	72.58
76	E31a_E32a	KnownJunction	0	111.42	19.34	227.63	90.81	65.45	29.40	72.83
77	ER32a	ExonRegion	0	111.03	17.80	216.37	89.75	67.39	36.92	77.59
78	E32a_E33a	KnownJunction	0	75.56	16.52	186.89	82.84	66.53	38.89	57.23
79	ER33a	ExonRegion	0	72.34	16.58	158.24	63.91	51.77	25.67	67.13
80	E33a_E34a	KnownJunction	0	62.04	18.44	117.75	59.11	51.78	13.53	61.14
81	ER34a	ExonRegion	1	57.39	27.00	114.96	73.88	47.92	16.33	65.49
82	E34a_E35a	KnownJunction	0	98.09	19.97	137.06	81.57	71.49	20.29	80.49
83	ER35a	ExonRegion	0	85.42	21.24	158.30	108.46	80.99	27.79	88.19
84	E35a_E36a	KnownJunction	0	83.45	25.04	142.04	112.40	62.75	42.83	90.65
85	ER36a	ExonRegion	0	109.42	21.08	175.09	86.39	72.54	28.04	80.40
86	E36a_E37a	KnownJunction	0	124.87	14.92	181.30	72.63	101.32	29.53	73.88
87	ER37a	ExonRegion	0	149.67	23.69	223.59	80.68	94.85	32.79	79.45
88	E37a_E38a	KnownJunction	0	117.01	22.17	171.90	77.16	97.54	30.23	75.96
89	ER38a	ExonRegion	0	84.78	17.38	168.05	73.84	65.70	29.13	75.11
90	E38a_E39a	KnownJunction	0	69.78	16.16	132.22	68.51	65.38	18.89	66.91
91	ER39a	ExonRegion	0	68.44	18.80	151.16	87.99	68.81	30.97	74.58
92	E39a_E40a	KnownJunction	0	87.24	15.74	150.44	96.44	72.41	34.63	71.16
93	ER40a	ExonRegion	0	91.52	20.61	167.41	88.04	73.94	30.45	82.64
94	E40a_E41a	KnownJunction	0	98.69	20.28	185.49	82.55	71.76	45.37	85.37
95	ER41a	ExonRegion	0	118.41	24.04	192.23	87.06	79.28	37.04	80.00
96	E41a_E42a	KnownJunction	1	141.10	21.44	199.42	62.34	98.41	44.73	64.32
97	ER42a	ExonRegion	0	166.49	33.19	256.83	96.71	119.68	59.10	92.51
98	E42a_E43a	KnownJunction	1	212.78	50.07	272.56	142.77	137.72	84.63	85.36
99	ER43a	ExonRegion	0	155.14	30.42	213.51	101.75	117.02	53.48	97.37
100	E43a_E44a	KnownJunction	0	80.35	20.05	151.16	65.40	89.05	35.80	94.37
101	ER44a	ExonRegion	0	93.27	25.17	163.82	94.67	100.25	38.96	99.69
102	E44a_E45a	KnownJunction	0	78.58	25.61	151.02	94.66	98.27	43.31	95.79
103	ER45a	ExonRegion	0	84.46	31.45	170.74	116.44	83.39	50.84	107.79
104	E45a_E46a	KnownJunction	0	94.85	36.20	179.41	113.24	106.18	58.05	119.94
105	ER46a	ExonRegion	0	89.83	29.30	185.76	96.24	100.42	36.93	92.49
106	E46a_E47a	KnownJunction	0	95.68	25.96	157.71	70.41	94.61	24.15	64.75
107	ER47a	ExonRegion	0	100.76	26.00	195.51	76.41	81.52	35.42	83.24
108	E47a_E48a	KnownJunction	0	68.51	17.31	160.50	45.81	46.98	24.15	74.60
109	ER48a	ExonRegion	0	74.02	16.82	160.68	68.93	84.44	29.66	85.30
110	E48a_E49a	KnownJunction	0	99.76	12.43	152.61	71.03	71.67	21.06	71.90
111	ER49a	ExonRegion	0	78.26	17.74	153.26	75.58	92.68	29.62	67.09
112	E49a_E50a	KnownJunction	0	115.51	19.99	181.32	79.78	104.75	44.43	82.46
113	ER50a	ExonRegion	0	120.04	20.17	208.21	102.90	111.60	40.01	94.87
114	E50a_E51a	KnownJunction	0	95.12	16.10	123.83	71.95	94.86	39.40	74.95
115	ER51a	ExonRegion	0	86.63	13.98	157.28	76.54	82.79	38.60	77.77
116	E51a_E52a	KnownJunction	0	81.71	14.27	165.10	93.25	91.75	31.11	96.58
117	ER52a	ExonRegion	0	66.69	17.80	144.07	87.20	96.51	32.10	97.16
118	E52a_E53a	KnownJunction	0	76.92	10.51	154.04	80.92	80.78	35.24	94.57
119	ER53a	ExonRegion	0	62.88	17.52	136.79	78.79	91.03	30.45	84.83
120	E53a_E54a	KnownJunction	0	80.91	17.50	173.71	77.89	119.51	38.54	86.82
121	ER54a	ExonRegion	0	94.85	26.87	182.79	116.41	134.18	47.04	93.54
122	E54a_E55a	KnownJunction	0	0.00	0.00	0.55	0.00	0.00	0.00	0.00
123	E54a_E55b	KnownJunction	0	98.55	31.03	164.60	133.94	109.06	42.67	107.21
124	ER55a	ExonRegion	0	23.63	10.02	48.60	35.85	28.34	12.57	29.51
125	ER55b	ExonRegion	0	82.66	34.46	175.14	107.47	113.88	39.26	103.70
126	E55a_E56a	KnownJunction	0	86.67	27.45	161.71	127.14	151.80	32.88	112.52
127	ER56a	ExonRegion	0	72.71	17.00	178.35	95.84	115.33	45.50	105.03
128	E56a_E57a	KnownJunction	0	72.03	18.97	185.29	105.25	102.19	27.50	108.14
129	ER57a	ExonRegion	0	69.54	28.30	173.13	107.76	98.81	43.03	101.53
130	E57a_E58a	KnownJunction	0	59.02	23.33	179.60	97.28	93.53	62.98	100.43
131	ER58a	ExonRegion	0	61.08	21.57	194.49	99.97	105.25	52.60	107.50
132	E58a_E59a	KnownJunction	0	59.82	24.48	179.28	103.54	117.45	41.33	106.68
133	ER59a	ExonRegion	0	58.76	24.17	180.52	104.10	100.16	44.07	94.02
134	E59a_E60a	KnownJunction	0	44.30	20.10	167.20	92.65	85.57	51.40	78.19
135	ER60a	ExonRegion	0	53.22	25.19	185.34	90.45	97.19	51.59	99.25
136	E60a_E61a	KnownJunction	0	62.32	23.20	156.79	90.84	123.96	43.52	92.67
137	ER61a	ExonRegion	0	62.48	19.30	165.82	93.62	98.66	51.30	98.13
138	E61a_E62a	KnownJunction	1	66.73	13.19	150.86	98.04	116.51	51.91	99.25
139	ER62a	ExonRegion	0	62.12	14.37	164.12	104.84	113.53	46.32	112.13
140	E62a_E63a	KnownJunction	0	55.83	14.13	150.26	89.13	101.59	46.90	99.14
141	ER63a	ExonRegion	0	55.46	20.62	130.49	89.49	100.05	50.86	97.27
142	E63a_E64a	KnownJunction	0	41.96	23.91	108.73	86.64	93.34	32.19	71.18
143	ER64a	ExonRegion	0	38.19	26.93	108.00	95.97	99.86	44.56	89.24
144	E64a_E65a	KnownJunction	0	38.82	17.13	100.03	88.59	87.09	42.72	84.57
145	ER65a	ExonRegion	0	52.31	25.19	125.58	115.57	104.91	40.62	100.01
146	E65a_E66a	KnownJunction	0	65.98	23.22	127.18	116.09	151.60	34.49	96.65
147	ER66a	ExonRegion	0	80.18	25.38	162.23	137.74	128.71	65.88	108.46
148	E66a_E67a	KnownJunction	0	62.54	22.15	145.20	134.53	111.30	64.43	78.55
149	ER67a	ExonRegion	0	89.75	22.07	171.47	149.08	132.86	63.32	111.57
150	E67a_E68a	KnownJunction	0	78.01	18.39	147.90	113.97	144.56	56.31	92.57
151	ER68a	ExonRegion	0	76.26	23.87	129.76	110.81	119.27	45.45	96.67
152	E68a_E69a	KnownJunction	1	24.07	12.53	43.20	29.80	33.66	1.53	11.16
153	E68a_E70a	KnownJunction	1	23.62	1.63	33.15	10.13	2.84	9.09	3.50
154	E68a_E71a	KnownJunction	0	36.72	11.80	78.20	44.89	110.33	26.67	72.76
155	ER69a	ExonRegion	0	26.94	7.83	68.67	24.78	37.16	8.04	19.66
156	E69_Da	NovelBoundary	1	23.12	6.99	66.64	28.39	43.66	5.71	16.60
157	I69	Intron	0	26.29	4.67	68.03	26.46	42.66	8.77	19.71
158	I69_AR1	ActiveIntronRegion	1	30.75	5.98	77.69	34.14	50.04	9.64	25.39
159	I69_SR1	SilentIntronRegion	0	26.58	3.33	69.74	23.54	40.15	9.93	17.34
160	I69_AR2	ActiveIntronRegion	0	21.54	4.11	57.16	20.28	36.59	7.19	15.28
161	E70_Aa	NovelBoundary	0	17.96	11.66	27.72	38.69	64.73	16.08	25.17
162	ER70a	ExonRegion	1	8.19	3.41	20.44	38.79	30.86	25.15	6.98
163	E70_Da	KnownBoundary	1	19.63	3.68	54.00	48.95	76.35	29.51	11.21
164	ER70b	ExonRegion	0	26.08	8.38	59.63	41.42	38.96	26.05	16.78
165	ER71a	ExonRegion	0	64.03	11.78	101.35	65.84	117.25	44.62	87.74
166	E71a_E72a	KnownJunction	1	82.58	13.63	114.86	70.92	108.28	63.52	113.05
167	ER72a	ExonRegion	1	68.45	14.44	102.62	82.08	105.34	57.24	105.37
168	E72a_E73a	KnownJunction	0	72.47	18.13	110.58	89.97	120.08	66.01	110.27
169	ER73a	ExonRegion	1	74.15	13.83	108.44	79.16	113.74	54.57	98.29
170	E73a_E74a	KnownJunction	0	55.49	13.69	83.00	57.19	78.17	44.17	73.75
171	E74_Aa	NovelBoundary	1	9.73	1.31	6.51	3.20	3.32	11.68	1.38
172	ER74a	ExonRegion	1	53.86	12.04	99.55	57.00	79.11	53.09	71.31
173	IG50	Intergenic	0	5.56	2.64	10.66	8.71	26.45	7.25	8.92
174	IG50_AR1	ActiveIntergenicRegion	0	6.56	5.72	15.60	12.32	31.87	8.35	15.77
175	IG50_SR1	SilentIntergenicRegion	0	15.48	6.42	22.54	16.53	47.17	12.43	17.49
176	IG50_AR2	ActiveIntergenicRegion	0	10.79	8.03	32.94	16.11	57.32	16.46	26.52
177	IG50_AR3	ActiveIntergenicRegion	0	6.51	4.00	15.71	11.48	37.24	9.93	12.17
178	IG50_SR2	SilentIntergenicRegion	0	8.59	1.81	11.91	15.02	25.39	14.43	9.97
179	IG50_AR4	ActiveIntergenicRegion	0	6.23	2.16	12.38	11.07	30.24	9.09	10.42
180	IG50_AR5	ActiveIntergenicRegion	0	0.71	0.71	0.41	0.75	26.73	1.79	0.16