Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CEP78 Gene 0 15.75 3.38 23.35 12.99 103.15 4.71 20.24 2 376597 Transcript 0 13.12 0.88 15.05 4.89 61.44 1.73 13.02 3 277082 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 376598 Transcript 0 14.76 0.60 19.75 8.08 64.20 3.61 17.45 5 IG7_AR4 ActiveIntergenicRegion 0 8.11 0.36 4.92 1.66 11.44 0.00 3.78 6 ER1a ExonRegion 0 0.37 0.69 0.39 1.25 2.85 0.00 5.01 7 ER1b ExonRegion 0 4.62 2.59 3.59 7.65 21.37 2.21 6.76 8 E1a_E2a KnownJunction 0 4.52 2.73 7.83 13.82 56.11 3.54 10.63 9 ER2a ExonRegion 0 10.33 5.37 23.79 18.63 81.31 4.97 19.59 10 E2a_E3a KnownJunction 0 13.24 10.19 39.48 17.91 98.60 9.67 19.08 11 ER3a ExonRegion 0 12.73 10.15 37.22 17.34 123.33 9.37 28.74 12 E3a_E4a KnownJunction 0 14.32 8.98 30.78 15.66 123.33 4.21 29.87 13 ER4a ExonRegion 0 12.71 8.69 31.52 18.30 137.56 5.40 32.28 14 E4a_E5a KnownJunction 1 9.08 8.20 34.53 19.05 142.05 5.87 30.15 15 ER5a ExonRegion 0 12.77 7.10 28.64 20.40 130.61 4.75 31.56 16 E5a_E6a KnownJunction 1 8.98 7.04 22.39 12.65 128.10 4.34 28.06 17 ER6a ExonRegion 0 14.23 5.43 27.27 18.34 134.90 5.16 27.15 18 E6a_E7a KnownJunction 0 24.80 2.68 30.08 17.91 175.52 4.53 31.90 19 ER7a ExonRegion 0 25.95 5.49 50.06 21.83 158.93 3.49 36.11 20 E7a_E8a KnownJunction 0 21.91 7.28 58.67 24.14 118.24 1.66 32.62 21 ER8a ExonRegion 0 17.75 5.79 39.69 22.92 120.86 3.24 30.31 22 E8a_E9a KnownJunction 0 6.09 1.58 11.05 2.93 9.96 0.00 5.66 23 E8a_E9b KnownJunction 0 17.37 1.37 35.74 15.55 92.88 9.17 30.07 24 I8 Intron 0 3.04 0.15 4.70 0.95 24.14 0.34 2.04 25 I8_AR1 ActiveIntronRegion 0 3.66 0.00 5.19 0.50 25.49 0.31 2.06 26 I8_AR2 ActiveIntronRegion 0 2.43 0.49 4.73 1.80 24.49 0.50 2.41 27 ER9a ExonRegion 0 11.91 1.82 19.64 13.40 44.14 2.15 16.53 28 ER9b ExonRegion 0 22.63 1.68 38.65 17.59 175.11 4.76 32.52 29 E9_Da NovelBoundary 0 3.74 0.00 5.46 0.00 44.65 0.00 2.26 30 E9a_E10a KnownJunction 0 13.89 1.10 21.28 4.55 126.98 6.00 25.01 31 I9 Intron 0 4.06 0.45 5.96 1.02 32.67 0.27 4.16 32 I9_SR1 SilentIntronRegion 0 3.47 0.34 4.63 0.38 25.14 0.17 2.76 33 I9_AR1 ActiveIntronRegion 0 4.90 0.62 7.41 1.75 39.24 0.32 5.56 34 I9_SR2 SilentIntronRegion 0 2.14 0.00 4.79 0.08 39.47 0.76 3.96 35 E10_Aa NovelBoundary 0 5.57 0.00 6.60 3.71 52.15 3.32 3.96 36 ER10a ExonRegion 0 10.84 0.03 24.22 6.23 173.50 5.09 24.37 37 E10a_E11a KnownJunction 1 6.71 0.00 24.59 7.37 192.40 1.02 18.65 38 ER11a ExonRegion 0 14.89 1.79 24.65 12.09 150.85 4.88 25.05 39 E11a_E12a KnownJunction 0 11.22 1.63 26.57 9.05 134.63 4.42 26.51 40 ER12a ExonRegion 1 11.21 4.53 31.79 15.00 193.42 3.93 35.84 41 E12a_E13a KnownJunction 0 13.29 2.81 35.34 10.32 257.27 5.87 31.92 42 ER13a ExonRegion 0 22.42 6.69 37.19 13.67 175.45 5.92 32.89 43 E13a_E14a KnownJunction 0 23.00 2.68 36.43 20.13 138.80 5.25 21.87 44 ER14a ExonRegion 0 30.56 6.22 41.56 18.97 170.16 9.54 27.63 45 E14a_E15a KnownJunction 1 22.36 0.00 13.97 0.00 110.98 1.39 10.55 46 E14a_E16a KnownJunction 0 13.47 4.94 19.70 20.16 74.88 7.02 9.04 47 ER15a ExonRegion 0 19.84 0.00 19.07 1.97 78.44 1.76 17.99 48 E15a_E16a KnownJunction 0 11.57 0.00 18.44 3.71 66.18 1.34 20.26 49 ER16a ExonRegion 0 31.05 2.63 36.43 21.45 171.89 9.68 28.78 50 E16_Da KnownBoundary 0 20.73 1.63 22.35 18.86 154.96 10.56 15.97 51 E16a_E18a KnownJunction 0 10.73 0.00 18.72 7.31 50.02 3.32 19.06 52 ER16b ExonRegion 0 6.97 1.88 8.16 7.35 58.92 3.74 7.10 53 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 ER18a ExonRegion 0 18.78 1.21 20.77 8.85 78.37 3.90 15.84 55 IG8_AR2 ActiveIntergenicRegion 0 4.36 0.84 9.30 2.63 15.96 2.80 3.58 56 IG8_SR2 SilentIntergenicRegion 0 5.56 0.55 6.88 1.68 21.70 0.75 3.22 57 IG8_AR4 ActiveIntergenicRegion 0 7.58 0.88 11.25 4.78 30.03 2.08 3.67