Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ANXA1	Gene	0	2763.35	16325.16	4795.93	5749.53	5.07	4576.33	4214.66
2	257497	Transcript	0	5694.87	22154.73	7320.73	9308.75	9.54	6454.43	8366.69
3	376912	Transcript	0	5.38	15.86	4.78	0.46	0.00	5.87	4.62
4	376911	Transcript	0	153.78	290.00	350.08	149.94	0.01	95.82	201.67
5	IG15_AR7	ActiveIntergenicRegion	0	6.10	25.20	18.59	24.80	2.17	34.38	2.70
6	ER1a	ExonRegion	0	4162.47	14557.45	5259.58	6076.24	8.18	4192.30	5726.60
7	E1a_E3b	KnownJunction	0	7227.28	29752.01	9381.89	12541.26	10.90	8716.57	11006.77
8	ER2a	ExonRegion	0	5.38	15.86	4.78	0.46	0.00	5.87	4.62
9	E3_Aa	NovelBoundary	0	95.42	93.03	123.96	81.98	51.96	91.76	65.98
10	ER3a	ExonRegion	0	140.04	202.79	319.80	135.29	0.02	69.65	197.25
11	E3_Ab	KnownBoundary	0	109.87	175.10	237.51	127.90	0.00	60.54	155.78
12	ER3b	ExonRegion	0	2583.85	18651.49	3628.67	6597.54	5.50	4803.78	4505.06
13	E3a_E4a	KnownJunction	0	581.81	20463.69	1024.06	5333.24	2.14	4498.47	1461.99
14	ER4a	ExonRegion	0	5010.12	27100.20	6850.36	9829.39	6.94	7813.45	6795.24
15	E4a_E5a	KnownJunction	0	5521.10	27583.93	8071.44	10226.46	13.79	7902.37	7931.64
16	ER5a	ExonRegion	0	3751.53	30413.53	6583.17	9763.68	10.94	8170.99	6572.07
17	E5a_E6a	KnownJunction	0	3901.51	33540.72	6479.44	10168.56	8.23	9135.16	5674.35
18	I5	Intron	1	354.04	158.78	1298.65	169.69	0.00	29.61	134.13
19	I5_AR1	ActiveIntronRegion	1	362.39	162.03	1328.65	173.14	0.00	30.28	137.24
20	ER6a	ExonRegion	0	5116.09	32355.07	9268.09	11108.31	7.94	9261.80	6879.36
21	E6a_E7a	KnownJunction	0	5181.07	30404.91	9330.47	10365.46	10.26	8472.29	6334.72
22	ER7a	ExonRegion	0	5448.38	33419.39	10194.74	11297.44	8.70	9189.94	7471.90
23	E7a_E8a	KnownJunction	0	5609.15	34425.75	10894.35	12071.52	10.49	9524.96	7970.05
24	ER8a	ExonRegion	0	5167.53	32718.03	9757.04	11105.82	10.19	8414.14	7726.35
25	E8a_E9a	KnownJunction	0	4080.61	28513.34	7324.13	9689.00	8.25	7145.19	6487.43
26	ER9a	ExonRegion	0	4708.78	32899.65	8210.94	11190.11	14.35	8123.16	7544.48
27	E9a_E10a	KnownJunction	0	4929.69	32719.34	8041.87	11115.45	10.93	8122.61	7538.89
28	ER10a	ExonRegion	0	5107.72	36572.91	8802.18	12168.63	9.49	8642.14	9079.91
29	E10_Da	NovelBoundary	1	338.49	482.32	1685.86	577.15	0.00	174.65	273.44
30	E10a_E11a	KnownJunction	0	4779.41	34136.79	7783.68	11946.04	5.14	8575.71	8554.37
31	E10a_E12a	NovelJunction	1	6.56	1952.23	9.50	203.67	0.00	318.57	27.06
32	I10	Intron	1	342.95	277.71	1423.26	375.62	0.00	92.05	164.32
33	I10_AR1	ActiveIntronRegion	1	343.82	278.42	1426.97	376.57	0.00	92.28	164.74
34	E11_Aa	NovelBoundary	1	541.69	420.21	1983.68	636.94	0.00	124.30	199.39
35	ER11a	ExonRegion	0	5076.04	35180.63	8392.23	12608.81	10.97	8712.17	9452.95
36	E11_Da	NovelBoundary	1	499.86	613.67	1697.52	422.35	0.00	90.82	203.66
37	E11a_E12a	KnownJunction	0	4940.34	33160.33	7188.60	12608.22	12.24	8651.63	9055.05
38	I11	Intron	1	328.88	188.29	1091.88	224.26	0.00	59.90	140.99
39	I11_AR2	ActiveIntronRegion	1	429.21	236.00	1407.84	288.54	0.00	76.94	181.84
40	E12_Aa	NovelBoundary	1	645.20	294.40	2034.64	322.93	0.00	113.50	268.56
41	ER12a	ExonRegion	0	5066.38	35491.66	7531.56	12655.59	16.66	8913.73	8931.70
42	E12_Da	NovelBoundary	1	752.27	564.73	2577.85	793.28	0.00	145.17	208.91
43	E12a_E13a	KnownJunction	0	5073.46	35334.16	7485.65	12181.57	12.86	8896.58	8123.85
44	I12	Intron	1	475.49	470.01	1937.02	798.09	0.06	179.14	228.08
45	I12_AR1	ActiveIntronRegion	1	476.12	470.62	1939.54	799.14	0.06	179.37	228.38
46	E13_Aa	NovelBoundary	1	396.42	496.19	1639.99	928.68	0.00	238.20	222.84
47	ER13a	ExonRegion	0	5063.60	34134.13	8572.44	12318.89	9.22	9280.72	8509.73
48	E13a_E14a	KnownJunction	0	4920.99	28023.53	7825.35	10331.90	6.69	8189.93	6782.45
49	I13	Intron	1	209.87	90.60	969.75	154.36	0.00	44.99	103.45
50	I13_SR2	SilentIntronRegion	1	247.77	108.35	1144.68	179.47	0.00	53.15	124.06
51	I13_AR2	ActiveIntronRegion	1	312.46	121.89	1227.64	238.85	0.00	61.64	124.04
52	ER14a	ExonRegion	0	3501.58	13649.56	6907.01	5030.39	4.30	5297.25	4573.96
53	ER14b	ExonRegion	0	167.52	377.21	380.35	164.60	0.00	121.99	206.09
54	IG16_SR1	SilentIntergenicRegion	0	7.52	25.79	11.39	5.31	0.00	3.69	24.02