Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MLANA	Gene	0	9.58	6.03	6.97	4.02	13.31	3.36	11.08
2	381476	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.83	0.00
3	381477	Transcript	0	18.57	11.44	13.62	7.70	28.02	6.30	17.42
4	381471	Transcript	0	1.45	0.47	0.59	0.29	0.22	0.00	0.77
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1c	ExonRegion	0	0.11	0.17	0.15	0.00	0.00	0.00	0.00
8	ER1d	ExonRegion	0	2.42	1.08	0.52	0.87	0.27	0.00	0.86
9	E1_Ad	KnownBoundary	0	2.67	1.58	0.70	1.08	2.21	0.00	0.00
10	ER1e	ExonRegion	0	1.76	0.79	0.79	0.60	0.35	0.30	2.15
11	E1_Db	KnownBoundary	0	0.70	1.55	0.89	0.00	0.00	0.00	1.45
12	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.66	0.00
13	ER1f	ExonRegion	0	1.94	0.33	1.26	0.00	0.40	0.00	1.46
14	E1c_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E2_Aa	NovelBoundary	1	7.13	5.62	4.20	3.12	0.85	0.00	17.50
16	ER2a	ExonRegion	0	1.09	5.40	0.50	0.00	0.00	0.49	1.01
17	E2_Da	NovelBoundary	0	4.26	6.83	0.00	6.12	0.00	5.84	7.50
18	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2	Intron	1	5.22	3.85	4.39	3.24	0.97	1.55	16.86
20	I2_SR1	SilentIntronRegion	1	4.77	3.55	3.59	2.81	0.72	0.87	12.00
21	I2_AR1	ActiveIntronRegion	1	5.21	0.00	2.65	3.35	0.54	2.97	13.47
22	I2_AR2	ActiveIntronRegion	1	6.15	3.93	4.14	5.61	1.00	3.61	24.54
23	I2_SR2	SilentIntronRegion	1	6.36	5.47	6.08	3.34	1.58	2.01	22.62
24	I2_AR3	ActiveIntronRegion	1	3.23	1.31	6.21	2.77	0.93	2.09	28.47
25	E3_Aa	NovelBoundary	1	3.67	1.16	6.87	3.93	0.00	3.00	14.59
26	ER3a	ExonRegion	1	1.20	0.00	1.56	2.89	0.43	1.92	13.62
27	E3_Da	NovelBoundary	1	2.70	1.13	6.19	1.35	2.03	1.66	35.56
28	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	I3	Intron	1	5.18	1.64	3.73	2.91	0.94	1.23	14.04
30	I3_AR1	ActiveIntronRegion	1	3.41	0.45	5.14	3.22	0.99	3.15	17.86
31	I3_SR2	SilentIntronRegion	1	8.98	1.42	6.25	4.21	1.39	1.32	19.70
32	I3_AR3	ActiveIntronRegion	1	6.15	1.39	6.77	2.85	1.50	1.23	27.27
33	I3_AR4	ActiveIntronRegion	1	5.35	3.42	2.60	3.33	1.12	1.72	16.84
34	I3_SR3	SilentIntronRegion	1	4.33	1.12	3.30	2.34	0.73	0.73	10.69
35	E4_Aa	NovelBoundary	0	3.87	3.26	2.73	1.25	4.15	0.00	9.75
36	ER4a	ExonRegion	0	1.87	3.19	0.96	0.02	1.09	1.63	4.89
37	E4_Da	NovelBoundary	0	14.29	2.57	2.26	1.27	2.21	0.00	10.95
38	E4a_E5a	KnownJunction	0	0.00	0.00	0.89	0.00	0.00	0.00	0.00
39	I4	Intron	1	5.63	1.76	2.83	1.04	1.35	0.76	8.32
40	I4_SR1	SilentIntronRegion	1	6.34	2.01	3.09	1.18	1.35	0.87	9.07
41	E5_Aa	NovelBoundary	0	5.57	2.76	3.32	3.87	0.99	0.00	8.44
42	ER5a	ExonRegion	0	2.13	0.58	2.00	1.24	0.98	1.23	10.19
43	E5_Da	KnownBoundary	0	0.78	1.02	0.00	0.00	3.27	0.00	4.00
44	E5_Db	KnownBoundary	0	2.62	0.00	0.88	0.00	1.13	0.00	7.64
45	ER5b	ExonRegion	0	3.84	1.21	1.35	0.00	4.05	0.00	13.15
46	ER5c	ExonRegion	0	18.57	11.44	13.62	7.70	28.02	6.30	17.42
47	IG5	Intergenic	0	8.61	2.99	5.50	2.82	2.29	2.41	16.32
48	IG5_AR2	ActiveIntergenicRegion	0	5.78	2.69	2.52	3.08	2.20	1.82	11.05
49	IG5_SR1	SilentIntergenicRegion	0	9.83	4.41	6.79	3.21	2.08	3.19	20.44
50	IG5_AR3	ActiveIntergenicRegion	0	19.76	3.84	12.15	7.02	3.09	4.37	25.54
51	IG5_SR2	SilentIntergenicRegion	0	10.79	2.01	6.32	2.36	1.67	2.92	15.23
52	IG5_AR4	ActiveIntergenicRegion	0	6.82	2.34	3.86	0.71	1.47	2.13	11.12
53	IG5_AR5	ActiveIntergenicRegion	0	9.16	3.40	3.84	2.95	2.39	1.45	15.35
54	IG5_SR3	SilentIntergenicRegion	0	6.88	1.45	4.87	1.98	2.09	1.18	14.46
55	IG5_AR6	ActiveIntergenicRegion	0	4.97	2.50	4.12	2.54	2.21	1.21	18.35
56	IG5_SR4	SilentIntergenicRegion	0	5.48	2.93	5.53	2.68	3.25	2.74	16.49
57	IG5_SR6	SilentIntergenicRegion	0	6.03	1.03	4.03	0.54	3.32	2.14	10.87