Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DOCK8	Gene	0	14.61	6.00	6.93	23.65	4.50	1.59	11.46
2	287364	Transcript	0	11.33	2.46	4.36	7.83	3.10	0.00	7.24
3	382341	Transcript	0	16.85	8.24	8.96	5.37	34.56	3.34	6.24
4	382331	Transcript	0	0.48	0.49	0.00	0.27	0.00	0.00	0.00
5	382329	Transcript	0	1.79	0.57	0.51	0.42	0.07	0.06	0.39
6	IG9_AR12	ActiveIntergenicRegion	0	3.78	0.00	2.22	11.22	3.20	0.00	5.49
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	0.00	0.00	0.00	0.15	0.00	0.00	0.00
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	4.67	4.97	4.34	24.86	1.63	2.74	7.21
11	E2a_E3a	KnownJunction	0	6.48	7.41	5.68	34.78	3.32	5.74	10.29
12	ER3a	ExonRegion	0	6.50	12.03	4.35	30.81	3.32	4.34	7.24
13	E3a_E4a	KnownJunction	0	6.23	11.87	3.72	31.56	1.18	1.66	8.23
14	ER4a	ExonRegion	0	8.50	11.99	5.23	33.84	1.42	2.17	8.04
15	E4a_E5a	KnownJunction	0	5.96	5.78	2.49	21.05	0.90	1.66	6.82
16	ER5a	ExonRegion	0	7.63	7.65	3.79	15.45	2.80	0.67	9.07
17	E5a_E6a	KnownJunction	0	9.51	5.04	5.32	18.88	2.10	0.00	6.79
18	ER6a	ExonRegion	0	13.42	5.55	6.57	16.04	2.08	1.01	11.37
19	E6a_E7a	KnownJunction	0	19.48	3.07	2.33	17.66	6.55	0.00	12.12
20	ER7a	ExonRegion	0	18.83	8.61	6.35	22.61	3.54	0.09	8.69
21	E7a_E8a	KnownJunction	0	13.77	7.78	8.21	27.66	1.18	0.00	9.47
22	ER8a	ExonRegion	0	17.36	7.40	6.88	26.58	2.17	2.44	7.78
23	E8a_E9a	KnownJunction	1	17.41	6.83	6.31	20.94	1.06	0.99	5.88
24	ER9a	ExonRegion	0	13.46	9.64	9.53	22.05	1.83	2.77	8.54
25	E9a_E10a	KnownJunction	0	9.31	8.20	12.23	20.21	2.14	3.86	6.54
26	ER10a	ExonRegion	0	15.22	8.34	10.42	20.43	2.98	0.73	7.80
27	E10a_E11a	KnownJunction	0	11.83	6.99	12.43	18.56	5.60	1.66	6.35
28	ER11a	ExonRegion	0	19.51	12.28	11.78	21.92	3.74	0.93	12.12
29	E11a_E12a	KnownJunction	0	24.15	9.90	12.49	24.00	3.18	0.00	11.39
30	E12_Aa	NovelBoundary	1	11.90	0.00	3.52	0.00	0.00	0.00	0.00
31	ER12a	ExonRegion	0	23.07	8.34	11.64	29.73	4.71	0.05	12.17
32	E12a_E13a	KnownJunction	0	19.29	4.26	10.49	19.18	3.18	0.00	11.84
33	ER13a	ExonRegion	0	22.84	8.55	10.20	26.29	3.53	0.00	13.93
34	E13_Da	KnownBoundary	0	2.64	0.00	0.00	0.00	0.00	0.00	0.00
35	E13a_E15a	KnownJunction	0	22.66	4.91	8.72	15.66	6.20	0.00	14.49
36	ER13b	ExonRegion	1	16.85	8.24	8.96	5.37	34.56	3.34	6.24
37	ER14a	ExonRegion	0	0.77	0.48	0.00	0.81	0.00	0.00	0.00
38	ER14b	ExonRegion	0	1.11	2.09	1.13	4.39	0.00	0.00	0.52
39	E14a_E15a	KnownJunction	0	0.00	0.00	1.41	7.34	0.00	0.00	0.00
40	ER15a	ExonRegion	0	18.51	8.90	10.87	31.49	1.19	1.18	17.16
41	E15_Da	KnownBoundary	0	6.46	0.00	0.56	3.17	0.88	2.84	0.76
42	E15a_E16a	KnownJunction	0	13.29	7.62	8.64	29.15	0.00	1.23	18.11
43	ER15b	ExonRegion	0	3.26	1.72	1.53	1.25	0.22	0.17	0.72
44	E15b_E16a	KnownJunction	0	0.58	0.00	0.00	0.00	0.00	0.00	0.00
45	ER16a	ExonRegion	0	18.90	7.03	9.54	30.28	3.54	1.21	15.91
46	E16a_E17a	KnownJunction	0	29.62	6.67	12.49	28.64	8.69	2.87	19.42
47	E16a_E18a	KnownJunction	0	0.00	1.00	0.00	0.00	0.00	0.00	0.00
48	ER17a	ExonRegion	0	15.30	6.67	8.65	26.15	2.99	2.19	17.46
49	E17a_E18a	KnownJunction	0	12.98	5.20	6.29	23.30	4.10	0.00	16.83
50	ER18a	ExonRegion	0	22.17	8.34	9.41	25.10	4.14	1.89	13.29
51	E18a_E19a	KnownJunction	0	9.93	7.54	6.08	21.84	1.91	0.00	14.32
52	ER19a	ExonRegion	0	17.13	4.10	8.01	31.95	3.31	0.91	16.03
53	E19a_E20a	KnownJunction	0	13.64	3.68	6.96	33.40	4.33	0.00	9.27
54	ER20a	ExonRegion	0	11.78	3.11	4.44	26.35	2.89	0.79	15.36
55	E20a_E21a	KnownJunction	0	6.93	3.02	4.73	13.09	1.06	0.00	12.64
56	ER21a	ExonRegion	0	9.71	2.69	4.61	24.71	2.43	0.54	14.70
57	E21a_E22a	KnownJunction	0	6.19	2.31	7.11	21.19	3.50	0.00	14.52
58	ER22a	ExonRegion	0	7.36	7.06	5.20	23.12	1.76	0.62	9.98
59	E22a_E23a	KnownJunction	0	8.90	6.46	8.88	15.28	1.11	1.05	7.40
60	ER23a	ExonRegion	0	12.70	9.86	6.12	23.60	4.06	0.87	10.44
61	E23a_E24a	KnownJunction	0	14.35	5.36	3.98	28.28	1.96	0.00	10.43
62	ER24a	ExonRegion	0	19.44	10.60	6.63	28.54	3.18	0.74	12.87
63	E24a_E25a	KnownJunction	0	17.79	13.74	9.13	37.11	5.28	1.31	11.19
64	ER25a	ExonRegion	0	23.21	8.77	8.34	28.01	5.19	0.15	14.82
65	E25a_E26a	KnownJunction	0	22.03	4.31	5.36	21.81	7.61	0.00	15.15
66	ER26a	ExonRegion	0	18.26	6.75	8.75	24.64	3.96	1.73	16.97
67	E26a_E27a	KnownJunction	0	11.03	5.62	7.80	20.83	4.24	4.34	19.85
68	ER27a	ExonRegion	0	13.39	6.04	7.63	28.06	3.96	2.07	17.33
69	E27a_E28a	KnownJunction	0	6.16	2.76	7.69	33.46	2.24	2.87	15.88
70	ER27b	ExonRegion	0	0.68	0.00	0.00	0.00	0.00	0.00	0.00
71	ER28a	ExonRegion	0	6.77	2.63	5.92	29.03	2.47	1.74	12.23
72	E28a_E29a	KnownJunction	0	6.78	1.63	2.13	23.35	3.23	1.29	11.05
73	ER29a	ExonRegion	0	11.32	2.02	5.57	27.94	3.33	1.66	9.93
74	E29a_E30a	KnownJunction	0	8.16	1.37	6.64	27.44	2.35	1.34	12.25
75	ER30a	ExonRegion	0	19.32	4.49	4.91	18.21	4.05	1.36	11.32
76	E30a_E31a	KnownJunction	0	24.57	2.50	4.64	18.75	3.30	4.61	13.03
77	ER31a	ExonRegion	0	23.66	7.13	6.43	21.41	4.53	3.78	12.70
78	E31a_E32a	KnownJunction	0	18.69	5.23	6.25	18.53	2.86	4.48	7.12
79	ER32a	ExonRegion	0	17.14	6.14	7.44	21.04	4.92	3.21	9.02
80	E32a_E33a	KnownJunction	0	17.49	4.65	10.35	15.85	2.21	3.22	7.62
81	ER33a	ExonRegion	0	15.12	6.23	9.24	23.82	4.68	3.18	11.76
82	E33a_E34a	KnownJunction	0	11.10	3.36	3.98	30.64	4.17	4.72	15.39
83	ER34a	ExonRegion	0	15.16	6.00	9.94	37.15	4.79	2.41	12.44
84	E34a_E35a	KnownJunction	0	19.01	4.62	9.99	44.19	2.05	1.31	8.03
85	ER35a	ExonRegion	0	15.18	3.87	8.43	37.66	5.41	0.85	19.07
86	E35a_E36a	KnownJunction	0	13.94	4.05	6.65	27.55	2.17	0.00	16.38
87	ER36a	ExonRegion	0	14.75	8.19	7.10	29.98	4.37	1.22	17.08
88	E36a_E37a	KnownJunction	0	13.00	7.43	9.47	28.23	5.33	0.00	17.27
89	ER37a	ExonRegion	0	23.38	6.42	8.24	23.46	5.12	1.60	14.54
90	E37a_E38a	KnownJunction	0	29.49	5.70	12.06	37.17	10.00	1.61	17.83
91	ER38a	ExonRegion	0	33.98	3.27	12.15	37.53	7.08	3.51	19.74
92	E38a_E39a	KnownJunction	1	39.94	2.02	9.60	36.38	2.21	1.66	11.21
93	ER39a	ExonRegion	0	18.32	1.39	7.62	25.60	5.20	3.13	13.48
94	E39a_E40a	KnownJunction	0	6.84	0.00	2.30	16.74	2.12	0.00	9.26
95	ER40a	ExonRegion	0	3.93	4.31	2.93	19.09	2.12	3.97	10.95
96	E40a_E41a	KnownJunction	0	8.85	2.84	4.40	23.57	1.96	1.10	13.20
97	ER41a	ExonRegion	0	10.48	7.23	4.63	27.54	1.95	1.24	11.78
98	E41a_E42a	KnownJunction	0	9.91	5.44	1.78	24.65	5.26	1.07	12.91
99	ER42a	ExonRegion	0	18.71	3.29	7.78	35.88	3.74	1.82	15.91
100	E42a_E43a	KnownJunction	0	23.70	6.83	1.37	21.19	2.28	1.66	12.91
101	ER43a	ExonRegion	0	16.57	5.94	6.81	28.80	4.81	0.50	12.94
102	E43a_E44a	KnownJunction	0	15.69	5.02	13.22	19.83	1.18	0.00	12.87
103	ER44a	ExonRegion	0	9.90	8.06	5.68	23.19	4.16	0.60	11.67
104	E44a_E45a	KnownJunction	0	8.55	10.72	6.93	25.63	4.17	2.57	7.95
105	ER45a	ExonRegion	0	13.43	7.83	6.50	32.15	3.11	1.79	13.64
106	E45a_E46a	KnownJunction	0	20.33	10.59	8.10	42.10	6.13	3.06	13.74
107	ER46a	ExonRegion	0	23.81	9.13	10.08	39.93	7.14	2.64	13.75
108	E46a_E47a	KnownJunction	0	22.50	9.46	6.47	29.50	5.37	4.93	11.88
109	ER47a	ExonRegion	0	24.50	12.36	9.14	37.26	3.43	3.23	15.14
110	E47a_E48a	KnownJunction	0	16.51	6.75	5.78	36.44	6.82	3.03	13.07
111	ER48a	ExonRegion	0	16.20	3.78	7.87	22.70	3.76	1.51	11.18
112	ER48b	ExonRegion	0	1.54	0.00	0.00	0.00	0.00	0.00	0.45