Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MTSS1	Gene	0	11.01	6.95	126.10	83.30	19.11	31.91	253.35
2	378017	Transcript	0	0.39	0.00	0.94	0.78	0.00	0.77	2.01
3	325064	Transcript	0	0	0	0	0	0	0	0
4	395508	Transcript	0	5.28	0.03	17.81	5.97	1.30	0.86	76.65
5	354184	Transcript	0	0.00	0.00	0.11	0.61	0.00	0.00	2.81
6	ER1a	ExonRegion	0	2.00	2.80	27.92	18.99	0.84	8.46	50.51
7	E1_Ab	KnownBoundary	0	3.66	7.43	42.59	44.40	1.18	17.45	89.73
8	ER1b	ExonRegion	0	3.94	2.89	64.36	61.28	4.12	17.20	140.68
9	E1a_E2a	KnownJunction	0	5.92	5.33	109.14	87.56	13.83	26.00	255.11
10	ER2a	ExonRegion	0	7.34	6.68	124.39	124.23	15.15	38.18	276.26
11	E2a_E3a	KnownJunction	1	5.01	7.17	121.47	145.02	16.87	39.88	285.04
12	ER3a	ExonRegion	1	5.98	4.55	132.05	121.75	13.57	39.53	312.76
13	E3_Da	NovelBoundary	0	3.29	1.26	10.46	3.22	2.19	9.46	39.31
14	E3a_E4a	KnownJunction	1	3.40	4.47	139.38	107.90	9.84	28.51	307.35
15	I3_AR1	ActiveIntronRegion	0	3.04	2.32	10.25	4.36	1.43	9.02	33.44
16	I3_AR4	ActiveIntronRegion	0	4.94	2.07	16.32	8.31	2.44	8.87	44.61
17	I3_AR5	ActiveIntronRegion	0	3.02	3.48	12.60	10.47	1.62	14.63	49.56
18	I3_AR6	ActiveIntronRegion	0	2.89	1.48	9.56	5.05	0.79	10.80	33.26
19	I3_AR7	ActiveIntronRegion	0	1.69	2.84	9.41	6.43	0.55	8.50	22.48
20	I3_AR8	ActiveIntronRegion	0	1.77	0.47	6.63	3.32	0.73	10.14	14.30
21	ER4a	ExonRegion	0	8.58	6.10	179.72	140.70	12.70	38.25	301.54
22	E4a_E5a	KnownJunction	0	10.65	3.94	187.23	134.07	19.16	29.43	267.71
23	ER5a	ExonRegion	0	14.91	7.61	264.86	149.45	22.92	50.77	376.33
24	E5a_E6a	KnownJunction	0	19.79	5.31	311.13	161.44	18.35	46.28	363.26
25	ER6a	ExonRegion	0	23.95	7.19	322.68	137.71	21.78	35.80	336.51
26	E6a_E7a	KnownJunction	1	4.01	0.00	17.26	4.55	1.04	1.37	54.00
27	E6a_E9a	KnownJunction	0	17.21	6.88	329.41	111.10	21.92	29.59	298.85
28	E7a_E9a	KnownJunction	1	4.47	0.00	12.85	5.04	1.18	0.00	71.21
29	ER7a	ExonRegion	1	7.36	0.10	23.31	8.31	1.69	1.23	104.73
30	I7_AR1	ActiveIntronRegion	0	4.41	7.19	29.26	19.10	2.90	14.33	11.48
31	ER8a	ExonRegion	0	0.00	0.00	0.23	0.00	0.00	0.00	0.00
32	I8_AR2	ActiveIntronRegion	0	5.71	11.29	32.40	38.20	3.79	16.00	10.64
33	E9_Aa	NovelBoundary	0	3.17	12.45	29.57	48.03	1.13	15.89	4.43
34	ER9a	ExonRegion	0	34.25	10.19	386.02	158.16	31.88	53.28	469.45
35	E9_Da	NovelBoundary	0	1.94	16.42	25.36	39.93	1.15	31.65	10.96
36	E9a_E10a	KnownJunction	0	31.53	8.12	362.19	180.81	25.63	51.94	590.11
37	I9	Intron	0	2.82	7.93	14.99	11.59	1.02	9.61	5.72
38	I9_AR1	ActiveIntronRegion	0	4.10	13.59	23.85	20.18	1.49	16.36	7.51
39	ER10a	ExonRegion	0	28.47	6.79	362.45	161.48	37.33	56.70	562.05
40	E10a_E11a	KnownJunction	0	16.12	2.78	258.88	162.95	34.56	49.82	527.50
41	ER11a	ExonRegion	0	17.02	3.82	231.30	145.31	35.01	39.97	514.86
42	E11a_E12a	KnownJunction	0	13.40	4.05	238.98	154.45	14.62	47.86	531.39
43	ER12a	ExonRegion	0	9.82	2.60	167.94	124.42	24.41	34.97	414.53
44	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.63
45	E12a_E14a	KnownJunction	0	5.92	1.63	73.96	60.22	9.64	19.46	164.09
46	E12a_E15a	NovelJunction	0	2.54	0.00	15.03	6.77	4.36	0.00	57.25
47	E12a_E15b	KnownJunction	0	0.00	0.00	0.00	1.22	0.00	0.00	5.62
48	I12_SR1	SilentIntronRegion	0	3.10	1.54	27.51	5.34	1.20	1.44	18.16
49	I12_SR2	SilentIntronRegion	0	3.13	2.25	27.47	3.30	1.08	2.69	16.46
50	ER13a	ExonRegion	0	0.39	0.00	2.82	2.35	0.00	2.32	4.40
51	E13a_E15a	KnownJunction	0	0.77	0.00	0.00	0.00	0.00	0.00	0.00
52	I13	Intron	0	4.24	1.92	26.23	4.41	1.31	3.43	21.98
53	I13_SR1	SilentIntronRegion	0	5.74	2.15	30.72	4.34	2.21	3.94	23.24
54	I13_AR2	ActiveIntronRegion	0	5.61	1.73	37.66	3.19	1.63	2.12	26.06
55	E14_Aa	NovelBoundary	1	9.06	5.52	36.99	7.10	0.00	3.64	10.43
56	ER14a	ExonRegion	0	8.99	6.30	78.51	75.13	5.61	20.21	192.69
57	E14a_E15a	KnownJunction	0	4.04	5.46	45.61	57.87	3.04	23.53	136.82
58	ER15a	ExonRegion	0	4.46	5.28	60.55	62.40	8.58	19.24	167.13
59	E15_Ab	KnownBoundary	0	5.92	5.73	77.96	74.61	11.64	16.67	181.25
60	ER15b	ExonRegion	0	4.36	6.27	56.12	69.70	11.09	22.65	149.36
61	E15a_E16a	KnownJunction	0	3.07	7.54	35.81	45.73	9.43	8.60	115.25
62	ER16a	ExonRegion	0	6.69	4.90	83.92	90.03	13.67	29.80	277.58
63	E16a_E17a	KnownJunction	0	7.71	1.63	113.66	85.82	20.29	35.32	320.48
64	ER17a	ExonRegion	0	9.55	7.42	115.42	93.13	15.92	34.04	305.47
65	E17_Da	KnownBoundary	0	7.73	0.00	90.50	26.93	9.29	11.04	151.50
66	ER17b	ExonRegion	0	12.64	9.23	117.49	70.29	26.21	35.23	227.83
67	IG34	Intergenic	0	5.83	6.54	9.15	7.42	4.83	2.09	4.33
68	IG34_AR9	ActiveIntergenicRegion	0	5.80	8.95	11.39	5.67	4.56	2.45	3.07
69	IG34_AR8	ActiveIntergenicRegion	0	5.89	8.50	11.63	9.56	4.59	3.68	4.50
70	IG34_AR7	ActiveIntergenicRegion	0	3.95	7.64	10.26	9.98	4.16	2.80	4.24
71	IG34_AR6	ActiveIntergenicRegion	0	4.42	6.38	7.17	10.91	4.45	1.23	5.79
72	IG34_AR5	ActiveIntergenicRegion	0	4.61	4.86	6.52	11.53	4.05	4.75	6.07
73	IG34_SR1	SilentIntergenicRegion	0	4.25	5.07	6.10	11.44	4.72	4.98	5.28
74	IG34_AR3	ActiveIntergenicRegion	0	2.46	8.26	8.13	2.74	2.63	1.72	4.72
75	IG34_AR2	ActiveIntergenicRegion	0	4.02	8.50	8.65	3.81	4.29	0.43	4.37
76	IG34_AR1	ActiveIntergenicRegion	0	7.28	7.74	10.68	8.49	5.97	1.77	4.16