Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RIPK2	Gene	0	796.33	1420.52	249.52	695.49	159.20	1250.51	155.54
2	220751	Transcript	0	1260.10	2015.12	384.17	989.39	234.71	1684.41	233.43
3	IG21_AR7	ActiveIntergenicRegion	0	8.48	3.83	4.13	5.58	0.82	16.85	4.16
4	IG21_AR9	ActiveIntergenicRegion	0	10.17	0.48	7.96	0.68	0.27	1.92	1.87
5	IG21_SR8	SilentIntergenicRegion	0	11.47	1.70	7.41	2.31	1.22	4.45	3.61
6	IG21_AR10	ActiveIntergenicRegion	0	27.01	1.21	8.32	1.25	1.62	5.08	2.31
7	IG21_SR9	SilentIntergenicRegion	0	27.57	1.21	6.86	1.25	0.91	5.82	2.02
8	IG21_AR11	ActiveIntergenicRegion	0	17.41	1.63	7.63	1.01	1.31	7.79	2.77
9	IG21_AR12	ActiveIntergenicRegion	0	10.50	4.96	6.24	4.00	1.39	2.99	2.10
10	IG21_SR10	SilentIntergenicRegion	0	22.43	6.19	14.39	7.73	4.26	10.24	8.86
11	IG21_AR18	ActiveIntergenicRegion	0	45.99	19.02	37.52	28.05	11.84	31.39	17.89
12	IG21_AR19	ActiveIntergenicRegion	0	58.58	23.41	41.28	34.26	13.74	46.68	19.66
13	IG21_SR12	SilentIntergenicRegion	0	9.48	3.86	6.02	5.70	1.02	6.03	1.17
14	IG21_AR21	ActiveIntergenicRegion	0	31.56	11.07	16.84	21.68	6.63	29.37	2.76
15	IG21_AR36	ActiveIntergenicRegion	0	9.27	11.70	3.67	5.73	6.67	8.16	0.56
16	IG21_SR21	SilentIntergenicRegion	0	36.76	14.44	10.07	8.00	7.05	7.11	3.39
17	IG21_AR37	ActiveIntergenicRegion	0	28.86	12.55	6.79	4.22	3.20	3.94	2.01
18	IG21_SR22	SilentIntergenicRegion	0	42.78	13.79	5.70	11.70	5.59	11.93	2.78
19	IG21_AR38	ActiveIntergenicRegion	0	44.18	31.64	10.25	14.58	7.29	18.83	6.45
20	IG21_SR23	SilentIntergenicRegion	0	39.54	16.45	10.52	9.13	10.50	4.08	4.60
21	IG21_AR39	ActiveIntergenicRegion	0	53.77	29.83	16.67	16.30	12.23	30.03	6.54
22	IG21_SR24	SilentIntergenicRegion	0	26.98	9.33	9.25	4.15	6.21	3.18	1.44
23	IG21_AR41	ActiveIntergenicRegion	0	39.66	78.18	20.20	45.29	14.85	55.35	9.34
24	IG21_SR26	SilentIntergenicRegion	0	18.36	4.85	6.22	2.00	3.22	1.71	1.66
25	IG21_SR27	SilentIntergenicRegion	0	15.13	4.20	10.65	1.38	3.21	1.23	1.05
26	IG21_AR43	ActiveIntergenicRegion	0	49.84	73.18	29.96	53.63	15.08	81.38	9.16
27	ER1a	ExonRegion	1	134.93	901.73	46.40	360.33	40.34	687.50	56.53
28	E1a_E2a	KnownJunction	0	265.70	587.25	78.62	158.84	95.51	402.59	76.82
29	E1a_E3a	NovelJunction	0	306.91	1157.34	110.11	498.02	19.53	817.90	69.09
30	ER2a	ExonRegion	0	484.24	857.44	154.61	263.67	125.68	675.04	126.07
31	E2a_E3a	KnownJunction	0	693.90	922.52	204.39	325.99	164.30	700.87	124.10
32	ER3a	ExonRegion	0	1513.95	2378.35	403.91	1061.01	307.08	1906.03	256.95
33	E3a_E4a	KnownJunction	0	2187.95	3093.25	612.79	1454.17	354.60	2474.69	311.57
34	E3a_E5a	NovelJunction	0	4.66	32.00	8.48	57.70	0.00	60.43	0.00
35	ER4a	ExonRegion	0	2248.31	3197.82	605.68	1404.55	381.48	2543.52	364.56
36	E4a_E5a	KnownJunction	0	1494.17	2794.62	482.60	1127.10	302.78	2421.76	298.77
37	ER5a	ExonRegion	0	1599.01	2705.15	478.69	1119.67	293.96	2020.59	298.12
38	E5a_E6a	KnownJunction	0	1349.78	2043.44	366.92	878.70	266.26	1296.36	226.54
39	ER6a	ExonRegion	0	1505.64	2311.85	466.88	1091.10	278.85	1697.73	273.78
40	E6a_E7a	KnownJunction	0	1582.19	1903.13	467.02	1079.99	301.49	1646.74	223.30
41	ER7a	ExonRegion	0	1711.38	2238.91	562.83	1254.05	287.11	1963.73	299.84
42	E7a_E8a	KnownJunction	0	1761.21	2462.08	532.44	1368.64	253.97	2261.87	296.69
43	E7a_E9a	NovelJunction	0	9.53	53.46	3.35	36.00	0.00	26.24	0.00
44	ER8a	ExonRegion	0	1492.41	2344.17	465.17	1250.09	242.69	1944.96	264.34
45	E8a_E9a	KnownJunction	0	1415.64	2403.07	504.21	1425.02	242.91	2148.00	320.16
46	ER9a	ExonRegion	0	1350.76	2346.10	460.92	1264.65	263.53	2051.75	302.63
47	E9a_E10a	KnownJunction	0	1181.65	2083.67	359.57	1127.40	207.71	1819.76	218.07
48	ER10a	ExonRegion	0	1111.77	2118.91	374.87	1189.81	231.63	1998.81	262.23
49	E10a_E11a	KnownJunction	0	957.32	1865.98	290.97	1136.69	190.12	1840.23	222.15
50	E11_Aa	NovelBoundary	1	376.64	10.56	106.20	1.68	0.00	8.25	0.00
51	ER11a	ExonRegion	0	420.27	758.08	148.08	435.71	97.02	870.11	78.77
52	IG22_SR1	SilentIntergenicRegion	0	10.39	4.92	5.45	6.42	2.01	14.37	2.71
53	IG22_AR1	ActiveIntergenicRegion	0	10.14	13.59	7.90	6.45	1.97	15.59	2.66
54	IG22_SR2	SilentIntergenicRegion	0	9.81	4.35	7.26	4.50	2.56	8.19	0.88
55	IG22_AR2	ActiveIntergenicRegion	0	13.06	7.29	5.98	6.65	2.02	5.52	0.11
56	IG22_SR3	SilentIntergenicRegion	0	6.45	5.16	4.41	7.10	0.81	11.44	1.37
57	IG22_AR3	ActiveIntergenicRegion	0	10.20	6.36	4.80	8.83	1.38	18.46	1.29
58	IG22_SR4	SilentIntergenicRegion	0	9.19	4.27	6.29	6.17	1.14	18.28	0.86
59	IG22_AR4	ActiveIntergenicRegion	0	12.44	3.55	9.66	9.36	0.37	29.76	1.28