Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HR	Gene	0	26.68	19.93	7.71	9.36	0.11	8.00	67.93
2	340251	Transcript	0	0.85	0.68	0.24	0.44	0.00	0.79	2.10
3	381418	Transcript	1	15.44	14.25	3.72	1.83	0.00	3.42	30.38
4	312841	Transcript	1	6.43	9.25	3.62	3.01	0.00	2.44	54.69
5	ER1a	ExonRegion	0	1.70	1.36	0.48	0.88	0.00	1.58	4.20
6	E1_Ab	KnownBoundary	1	3.44	9.56	0.00	3.98	0.00	6.78	21.15
7	ER1b	ExonRegion	0	5.64	7.52	2.90	3.50	0.00	3.95	19.21
8	E1a_E2a	KnownJunction	1	16.04	9.54	7.67	1.03	0.00	0.00	23.40
9	ER2a	ExonRegion	0	24.17	28.55	8.14	8.66	0.31	8.48	71.70
10	E2a_E3a	KnownJunction	0	34.03	13.14	9.43	7.80	0.00	12.19	73.32
11	ER3a	ExonRegion	0	39.46	22.26	9.47	12.74	0.16	9.59	70.76
12	E3a_E4a	KnownJunction	0	56.25	31.68	16.44	16.17	0.00	21.17	112.34
13	ER4a	ExonRegion	0	38.31	29.64	10.61	15.90	0.00	14.35	78.32
14	E4a_E5a	KnownJunction	0	31.71	23.72	4.67	10.57	0.00	5.52	70.88
15	ER5a	ExonRegion	0	25.42	24.03	6.35	10.02	0.00	7.44	65.56
16	E5a_E6a	KnownJunction	0	25.85	22.15	2.99	4.96	0.00	4.34	48.34
17	ER6a	ExonRegion	0	20.25	30.03	6.65	11.74	0.50	9.04	76.50
18	E6a_E7a	KnownJunction	0	50.12	29.03	11.02	14.44	0.00	8.98	103.54
19	I6	Intron	0	6.17	1.06	1.18	0.31	0.00	0.00	14.80
20	I6_SR1	SilentIntronRegion	1	6.19	1.06	1.18	0.31	0.00	0.00	14.85
21	E7_Aa	NovelBoundary	0	6.86	4.41	0.83	0.00	0.00	2.73	26.91
22	ER7a	ExonRegion	0	52.32	33.79	17.65	18.40	0.00	13.74	116.48
23	E7a_E8a	KnownJunction	0	42.86	24.30	16.58	8.43	0.00	15.44	105.51
24	E7a_E9a	NovelJunction	0	4.49	0.00	0.00	1.46	0.00	0.00	21.80
25	ER8a	ExonRegion	0	44.60	25.96	15.68	8.03	0.36	12.09	93.48
26	E8a_E9a	KnownJunction	0	68.55	22.51	26.56	10.21	0.00	10.10	115.74
27	I8	Intron	0	12.08	1.88	1.75	0.28	0.06	0.00	14.16
28	I8_AR1	ActiveIntronRegion	0	23.58	3.02	2.40	0.00	0.25	0.00	17.33
29	E9_Aa	NovelBoundary	0	39.00	1.37	2.97	1.54	0.00	0.00	32.86
30	ER9a	ExonRegion	0	66.46	22.16	21.09	7.51	0.00	9.96	121.12
31	E9a_E10a	KnownJunction	0	51.25	19.76	11.09	9.40	0.00	8.04	107.06
32	ER10a	ExonRegion	0	39.99	18.98	12.21	11.27	0.00	7.01	92.81
33	E10a_E11a	KnownJunction	0	45.03	16.13	6.64	6.96	0.00	6.03	80.84
34	ER11a	ExonRegion	0	27.09	14.37	6.11	9.81	0.00	5.20	61.80
35	E11a_E12a	KnownJunction	0	24.18	25.19	6.35	7.83	0.00	11.23	80.36
36	ER12a	ExonRegion	0	39.75	32.93	10.68	12.44	0.00	10.91	97.30
37	E12a_E13a	KnownJunction	0	36.57	30.58	10.99	16.77	0.00	14.39	100.10
38	ER13a	ExonRegion	0	31.31	30.72	9.51	17.15	0.00	12.70	93.72
39	E13a_E14a	KnownJunction	0	35.55	28.08	8.42	16.17	0.00	11.42	88.81
40	ER14a	ExonRegion	0	28.40	25.33	10.59	18.05	0.00	19.22	82.87
41	E14_Da	KnownBoundary	0	26.70	23.96	5.45	19.64	0.00	14.69	69.89
42	E14a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER14b	ExonRegion	0	29.01	25.46	6.70	14.02	0.00	15.34	72.56
44	E14b_E15a	KnownJunction	0	41.16	27.56	11.28	9.48	0.00	15.22	81.88
45	ER15a	ExonRegion	0	39.24	25.93	13.12	15.72	0.00	15.14	99.20
46	E15_Da	NovelBoundary	0	7.88	4.54	0.65	1.52	0.00	1.34	25.62
47	E15a_E16a	KnownJunction	0	21.43	34.97	9.84	7.34	0.00	8.12	84.08
48	ER16a	ExonRegion	0	24.20	26.31	8.93	11.41	0.00	8.03	84.51
49	E16_Da	NovelBoundary	1	9.58	16.13	4.05	11.46	0.00	4.50	46.61
50	E16a_E17a	KnownJunction	0	13.50	13.77	3.49	2.71	0.00	4.15	26.05
51	E16a_E18a	KnownJunction	1	6.43	9.25	3.62	3.01	0.00	2.44	54.69
52	I16	Intron	1	16.06	5.63	3.83	2.84	0.05	2.03	52.71
53	I16_AR1	ActiveIntronRegion	1	5.09	2.36	0.70	1.31	0.00	0.82	18.33
54	I16_AR2	ActiveIntronRegion	1	18.82	6.31	4.61	3.15	0.06	2.25	61.43
55	E17_Aa	NovelBoundary	0	7.26	1.29	1.78	1.14	0.00	1.07	20.14
56	ER17a	ExonRegion	0	15.86	12.31	4.01	2.79	0.00	3.17	26.26
57	E17_Da	NovelBoundary	0	10.13	1.29	4.15	0.00	0.00	0.00	7.90
58	E17a_E18a	KnownJunction	1	16.96	16.68	3.66	0.00	0.00	2.92	38.82
59	I17	Intron	1	6.75	2.05	1.27	0.63	0.00	0.41	22.59
60	I17_AR1	ActiveIntronRegion	1	6.78	2.06	1.28	0.63	0.00	0.41	22.68
61	E18_Aa	NovelBoundary	1	6.38	2.29	2.18	1.54	0.00	4.40	40.23
62	ER18a	ExonRegion	0	37.91	40.64	12.69	13.37	0.09	16.45	133.16
63	E18a_E19a	KnownJunction	0	47.27	45.27	14.34	15.14	1.06	17.77	143.00
64	E19_Aa	NovelBoundary	0	13.10	0.00	1.94	5.04	0.00	1.37	23.93
65	ER19a	ExonRegion	0	58.79	38.78	15.70	19.38	0.22	15.08	158.63
66	E19_Da	KnownBoundary	1	21.75	16.87	8.61	8.45	0.00	11.07	81.93
67	ER19b	ExonRegion	0	12.73	11.74	4.76	6.24	0.13	4.89	53.88