Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC073842.5	Gene	0	11.52	7.01	38.65	7.85	26.79	7.82	7.31
2	292369	Transcript	0	3.70	2.56	15.76	3.29	5.76	4.34	2.11
3	328453	Transcript	0	8.10	3.06	22.92	3.45	18.84	3.29	4.94
4	IG28_AR3	ActiveIntergenicRegion	0	1.85	0.38	1.65	0.39	11.13	0.78	8.04
5	IG28_SR2	SilentIntergenicRegion	0	1.33	0.00	0.77	0.72	9.85	0.59	5.05
6	ER1a	ExonRegion	0	0.37	0.96	0.94	0.54	0.77	1.21	0.48
7	E1_Ab	KnownBoundary	0	16.54	46.71	27.69	16.63	13.83	31.46	17.68
8	ER1b	ExonRegion	0	7.18	11.03	28.70	13.34	24.04	8.27	4.87
9	E1a_E2a	KnownJunction	0	9.53	21.41	52.64	27.61	38.89	19.38	12.10
10	E2_Aa	NovelBoundary	0	2.92	0.00	19.83	0.00	2.17	0.00	2.16
11	ER2a	ExonRegion	0	14.62	21.78	60.95	28.17	58.21	23.22	15.50
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	25.71	21.52	72.04	28.21	64.90	23.20	18.46
14	E3a_E4a	KnownJunction	0	40.47	24.67	92.76	34.00	94.12	16.91	17.27
15	ER4a	ExonRegion	0	24.29	16.55	63.80	15.71	79.92	9.70	16.08
16	E4a_E5a	KnownJunction	0	41.49	16.31	75.00	11.27	75.18	6.86	24.22
17	ER5a	ExonRegion	0	25.11	11.46	62.68	6.36	65.55	5.85	16.48
18	E5a_E6a	KnownJunction	0	14.60	1.10	42.13	5.31	35.29	1.61	9.36
19	E5a_E9a	NovelJunction	0	6.01	1.31	12.90	1.33	2.12	6.08	1.59
20	Ix	Intron	0	4.66	3.69	11.85	2.47	12.92	0.29	2.12
21	Ix_SR1	SilentIntronRegion	0	5.39	4.16	13.67	2.89	14.64	0.34	2.49
22	Ix	Intron	0	21.53	12.23	45.30	9.26	30.19	0.59	11.38
23	Ix_AR1	ActiveIntronRegion	0	21.66	12.30	45.58	9.32	30.35	0.59	11.44
24	Ix	Intron	0	8.60	3.11	23.41	0.84	24.49	0.66	2.73
25	Ix_AR1	ActiveIntronRegion	0	2.77	1.32	7.36	0.92	9.65	0.00	0.28
26	Ix_SR1	SilentIntronRegion	0	9.16	3.29	24.93	0.84	25.91	0.73	2.96
27	Ix	Intron	0	5.09	1.69	10.90	1.37	10.18	0.45	2.42
28	Ix_SR4	SilentIntronRegion	0	1.66	0.00	8.37	0.00	9.79	0.57	1.25
29	Ix_AR4	ActiveIntronRegion	0	5.66	1.60	14.23	0.62	16.24	0.81	2.67
30	Ix_SR2	SilentIntronRegion	0	6.10	0.70	15.46	2.37	10.59	1.05	2.67
31	Ix_AR2	ActiveIntronRegion	0	5.49	2.56	9.15	1.94	7.68	0.12	2.76
32	Ix_SR1	SilentIntronRegion	0	5.12	2.02	10.81	0.00	7.83	0.00	2.50
33	Ix	Intron	0	2.84	2.17	12.17	0.22	9.78	0.44	2.29
34	Ix_AR1	ActiveIntronRegion	0	2.84	2.17	12.20	0.22	9.80	0.44	2.29
35	E6_Aa	NovelBoundary	0	9.03	1.63	18.28	1.25	10.86	4.66	4.72
36	ER6a	ExonRegion	0	16.31	1.52	45.95	3.31	44.98	2.44	10.97
37	E6_Da	NovelBoundary	0	25.42	2.60	42.23	4.06	35.34	0.00	4.59
38	E6a_E7a	KnownJunction	0	4.66	1.63	14.54	1.68	15.95	0.00	8.13
39	Ix	Intron	0	7.50	0.89	18.58	0.69	15.37	0.45	1.10
40	Ix_SR2	SilentIntronRegion	0	1.61	0.00	0.96	0.00	11.70	0.00	0.00
41	Ix_SR1	SilentIntronRegion	0	9.54	1.39	21.50	0.11	11.26	0.57	1.15
42	Ix_AR1	ActiveIntronRegion	0	8.53	0.99	22.62	1.06	17.75	0.54	1.39
43	E7_Aa	NovelBoundary	1	1.59	3.05	18.93	0.00	19.04	1.42	4.47
44	ER7a	ExonRegion	0	9.27	5.25	34.14	4.07	22.02	2.82	7.45
45	E7_Da	KnownBoundary	0	21.76	8.41	36.34	4.69	41.10	1.13	10.19
46	E7a_E9a	KnownJunction	0	1.65	0.00	6.39	0.00	0.00	0.00	0.69
47	ER7b	ExonRegion	0	14.08	6.76	40.72	5.17	31.00	4.11	7.76
48	E7_Db	NovelBoundary	0	23.75	15.53	43.02	11.32	36.54	8.74	12.50
49	E7b_E8a	KnownJunction	0	1.75	0.00	5.03	0.00	0.00	0.00	0.00
50	E8_Aa	NovelBoundary	0	13.54	5.96	23.85	8.70	23.08	4.21	7.70
51	ER8a	ExonRegion	0	8.47	2.43	23.00	5.19	25.50	5.77	7.06
52	E8_Da	NovelBoundary	0	6.29	1.63	11.63	0.00	3.02	0.00	2.25
53	ER9a	ExonRegion	0	9.08	6.73	39.95	9.34	16.51	11.82	5.17