Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	hPMS4	Gene	0	32.83	17.22	24.68	11.17	55.28	9.48	47.84
2	306533	Transcript	0	5.32	3.56	4.90	2.30	13.94	1.96	11.95
3	337023	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	318568	Transcript	0	0	0	0	0	0	0	0
5	394959	Transcript	0	57.22	21.02	55.56	21.67	0.00	15.66	90.39
6	ER1a	ExonRegion	0	2.94	1.35	1.94	2.42	0.38	1.55	3.32
7	E1_Ab	KnownBoundary	1	5.69	7.75	10.95	6.69	21.65	0.00	22.20
8	E1_Ac	KnownBoundary	1	2.87	7.41	2.30	3.20	40.53	0.00	15.39
9	ER1b	ExonRegion	0	1.83	0.46	0.68	2.49	6.48	0.92	5.65
10	ER1c	ExonRegion	1	6.29	4.59	6.75	4.80	31.01	3.32	21.90
11	E1a_E2a	KnownJunction	1	6.64	5.60	12.34	1.65	67.29	4.07	32.03
12	E1a_E2b	NovelJunction	1	9.93	3.21	1.74	4.88	0.00	0.00	16.25
13	I1_AR4	ActiveIntronRegion	0	13.60	0.40	7.46	2.73	5.63	1.40	9.40
14	I1_AR5	ActiveIntronRegion	0	18.55	2.43	6.00	4.99	6.02	1.23	13.78
15	E2_Ab	NovelBoundary	0	113.56	58.74	126.83	58.71	77.76	38.91	179.74
16	ER2a	ExonRegion	1	7.06	7.29	11.21	4.08	53.67	3.68	32.44
17	ER2b	ExonRegion	1	3.75	6.59	4.73	4.97	12.42	2.82	14.60
18	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	1	7.63	10.08	11.38	6.15	22.68	6.27	25.71
21	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER4a	ExonRegion	0	8.15	9.91	8.31	5.96	9.78	3.68	21.15
24	E4a_E5a	KnownJunction	0	2.05	4.73	4.41	0.00	0.00	1.53	7.94
25	ER5a	ExonRegion	0	4.76	9.65	6.74	4.44	18.63	3.01	10.86
26	E5_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E5a_E5b	KnownJunction	0	73.85	16.10	70.72	23.05	0.00	13.78	99.92
28	E5_Ab	KnownBoundary	0	33.16	6.49	37.23	5.01	47.79	4.69	63.75
29	ER5b	ExonRegion	0	5.53	2.92	9.62	8.23	6.48	3.92	8.10
30	ER5c	ExonRegion	0	4.78	2.70	8.24	5.20	9.09	3.02	7.85
31	E5_Db	KnownBoundary	1	90.21	57.61	97.39	41.02	129.28	32.72	208.67
32	E5b_E5c	KnownJunction	0	80.46	40.43	85.60	30.61	0.00	31.54	143.77
33	ER5d	ExonRegion	0	2.00	2.43	6.10	2.49	9.56	2.45	7.42
34	E5c_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER5e	ExonRegion	0	0.90	2.43	3.97	1.98	8.55	1.52	5.49
36	ER6a	ExonRegion	0	2.82	1.99	1.05	5.78	13.89	0.71	1.21
37	E6_Da	KnownBoundary	0	81.95	229.06	83.69	235.86	108.76	223.48	157.16
38	E6a_E6b	KnownJunction	0	17.34	6.52	10.36	11.35	0.00	1.66	27.49
39	E6_Ab	KnownBoundary	0	44.95	15.76	25.58	22.95	26.95	13.75	44.16
40	ER6b	ExonRegion	0	8.76	2.43	1.35	8.48	24.13	2.45	1.48
41	ER6c	ExonRegion	1	12.00	3.35	3.97	7.53	21.33	3.46	4.16
42	E6c_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER6d	ExonRegion	1	14.60	2.43	7.45	3.74	10.53	3.68	6.75
44	ER7a	ExonRegion	0	99.52	47.28	72.00	27.96	162.23	25.74	137.29
45	ER7b	ExonRegion	0	13.45	1.82	9.82	3.12	59.52	3.06	27.32