Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SUMF2 Gene 0 175.30 61.86 85.61 34.81 197.33 46.64 430.09 2 395436 Transcript 1 18.76 3.31 5.92 0.00 8.21 3.22 80.47 3 395435 Transcript 0 1.69 1.47 0.52 0.00 2.03 1.58 7.52 4 395437 Transcript 0 9.60 3.07 11.46 0.48 19.35 0.75 17.57 5 275607 Transcript 0 0 0 0 0 0 0 0 6 342190 Transcript 0 0.73 0.00 0.00 1.11 1.18 1.31 2.18 7 IG8 Intergenic 0 0.25 0.79 0.22 2.01 0.00 7.95 0.00 8 IG8_AR1 ActiveIntergenicRegion 0 0.26 0.84 0.23 2.10 0.00 8.41 0.00 9 ER1a ExonRegion 0 18.56 3.36 5.48 1.94 31.96 4.53 36.25 10 E1_Ab KnownBoundary 0 95.48 16.81 26.21 7.15 150.00 13.40 185.42 11 ER1b ExonRegion 0 236.69 45.61 82.06 21.48 203.40 25.83 330.30 12 E1a_E2a KnownJunction 0 248.35 46.42 88.09 21.67 62.20 25.86 347.84 13 ER2a ExonRegion 0 221.22 65.02 99.14 25.46 135.75 29.06 436.18 14 E2a_E3a KnownJunction 0 491.95 82.26 210.87 27.23 395.79 36.69 758.93 15 E2_Db NovelBoundary 0 4.57 2.84 5.43 3.03 7.93 13.32 8.21 16 E2b_E3a KnownJunction 0 8.26 1.29 10.35 0.00 12.52 0.00 11.82 17 ER2b ExonRegion 0 10.93 4.86 12.57 0.97 26.19 1.50 23.31 18 ER3a ExonRegion 0 230.12 77.84 122.24 27.95 383.12 36.62 654.30 19 E3_Da NovelBoundary 0 2.35 7.83 0.00 12.76 11.18 15.44 1.69 20 E3a_E4a KnownJunction 1 169.04 53.73 101.94 14.49 329.93 17.18 485.82 21 E3a_E5a KnownJunction 1 18.76 3.31 5.92 0.00 8.21 3.22 80.47 22 E3a_E7a KnownJunction 0 1.69 1.47 0.52 0.00 2.03 1.58 7.52 23 E4_Aa NovelBoundary 1 3.49 2.81 1.60 8.72 2.81 15.89 2.15 24 ER4a ExonRegion 0 329.63 53.40 147.19 14.27 271.05 19.07 629.61 25 E4a_E5a KnownJunction 0 380.08 40.38 148.89 15.17 187.19 20.37 610.06 26 E4a_E6a NovelJunction 1 18.28 16.84 8.02 1.60 15.17 8.76 10.42 27 I4 Intron 1 5.41 1.75 1.81 4.65 12.45 10.65 4.18 28 I4_AR1 ActiveIntronRegion 1 5.44 1.75 1.82 4.67 12.51 10.70 4.20 29 ER5a ExonRegion 0 252.75 60.87 118.46 15.98 224.74 32.79 676.70 30 E5_Da NovelBoundary 0 25.97 9.64 5.49 6.64 12.86 17.80 6.35 31 E5a_E6a KnownJunction 0 403.63 54.88 152.71 17.12 379.38 21.84 946.56 32 I5 Intron 0 16.55 8.63 6.13 15.77 13.57 16.33 8.21 33 I5_AR3 ActiveIntronRegion 0 23.90 12.59 9.37 24.55 18.63 23.23 12.77 34 E6_Aa NovelBoundary 1 20.29 13.69 15.56 27.17 31.40 29.02 11.88 35 ER6a ExonRegion 0 296.20 50.03 123.82 23.27 347.74 21.41 775.58 36 E6_Da NovelBoundary 0 6.81 19.76 2.79 21.08 2.35 35.03 1.78 37 E6a_E7a KnownJunction 0 149.54 49.99 80.72 29.04 183.06 25.35 547.96 38 I6 Intron 0 6.13 14.71 3.25 17.41 1.00 21.83 2.02 39 I6_SR2 SilentIntronRegion 0 7.45 17.76 3.91 20.63 1.24 25.91 2.38 40 E7_Aa NovelBoundary 1 3.47 29.32 2.03 34.51 1.01 57.70 5.99 41 ER7a ExonRegion 0 144.42 71.18 86.72 39.26 217.34 35.45 577.25 42 E7_Da NovelBoundary 0 16.47 28.01 6.09 22.81 13.95 49.37 5.78 43 E7a_E8a KnownJunction 0 128.40 55.35 58.92 22.13 184.15 26.53 482.95 44 E7a_E9a KnownJunction 0 0.73 0.00 0.00 1.11 1.18 1.31 2.18 45 I7 Intron 0 5.61 16.62 2.51 15.50 5.79 24.15 2.30 46 I7_AR1 ActiveIntronRegion 1 6.20 13.06 3.50 15.53 6.28 28.08 2.74 47 I7_SR1 SilentIntronRegion 0 5.22 20.02 1.70 15.80 5.48 21.26 1.97 48 E8_Aa NovelBoundary 0 10.66 19.57 3.92 21.29 9.04 25.70 4.44 49 ER8a ExonRegion 0 152.91 67.14 74.75 35.71 218.62 53.93 527.33 50 E8_Da NovelBoundary 0 7.44 31.55 3.92 35.68 6.18 33.02 3.70 51 E8a_E9a KnownJunction 0 180.99 51.18 89.64 24.60 154.73 40.15 503.18 52 I8 Intron 0 10.75 28.31 9.25 32.07 13.02 38.52 7.58 53 I8_SR1 SilentIntronRegion 0 1.27 8.08 1.63 6.53 3.53 11.03 0.71 54 I8_AR1 ActiveIntronRegion 0 2.40 15.19 4.57 13.09 5.67 15.94 1.35 55 I8_SR2 SilentIntronRegion 0 12.17 31.65 11.26 33.61 10.92 48.51 6.62 56 I8_AR2 ActiveIntronRegion 0 9.97 26.26 7.69 32.27 15.90 30.20 9.08 57 E9_Aa NovelBoundary 0 7.38 34.49 0.65 34.22 8.85 30.52 12.05 58 ER9a ExonRegion 0 155.55 65.30 79.47 43.73 182.28 58.89 364.61