Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DAGLB	Gene	0	95.07	159.66	92.91	227.59	79.86	128.09	61.74
2	297056	Transcript	0	85.96	156.68	93.73	213.61	80.23	116.36	60.77
3	IG9_SR2	SilentIntergenicRegion	0	4.32	13.21	12.45	17.61	0.81	22.99	1.35
4	IG9_AR2	ActiveIntergenicRegion	0	8.45	29.16	22.16	34.38	1.50	52.02	1.35
5	IG9_SR1	SilentIntergenicRegion	0	11.06	76.66	35.29	97.69	1.75	91.55	2.04
6	IG9_AR1	ActiveIntergenicRegion	0	7.25	39.88	14.34	42.64	0.70	45.88	2.98
7	ER1a	ExonRegion	0	39.58	95.02	42.16	130.09	36.08	66.54	23.92
8	E1a_E2a	KnownJunction	0	58.93	173.00	67.02	203.59	27.64	110.39	39.00
9	ER2a	ExonRegion	0	88.34	199.86	102.01	253.82	88.49	124.46	60.89
10	E2_Da	NovelBoundary	1	31.41	6.57	9.97	13.95	6.62	4.21	2.15
11	E2a_E3a	KnownJunction	0	61.79	188.94	91.98	266.41	73.38	123.33	44.07
12	E2a_E6a	NovelJunction	0	1.34	9.25	4.24	11.57	1.04	10.75	0.89
13	ER3a	ExonRegion	0	91.50	174.13	102.51	227.93	66.35	101.23	53.46
14	E3_Da	NovelBoundary	1	40.29	10.35	23.94	29.64	8.25	10.48	4.31
15	E3a_E4a	KnownJunction	0	57.96	113.20	70.23	127.52	86.52	90.07	44.08
16	E3a_E5a	NovelJunction	0	8.56	21.99	8.41	18.50	5.03	20.50	3.32
17	E3a_E6a	NovelJunction	1	2.49	0.00	2.00	9.35	0.92	0.00	0.80
18	E3a_E9a	NovelJunction	1	0.00	0.00	0.56	17.23	0.00	1.47	0.00
19	I3	Intron	0	20.73	4.48	12.57	10.18	3.37	3.91	2.89
20	I3_SR1	SilentIntronRegion	0	52.78	10.50	30.08	24.58	6.85	6.90	7.31
21	I3_SR2	SilentIntronRegion	0	29.44	3.45	17.76	16.32	2.77	2.09	4.14
22	ER4a	ExonRegion	0	135.66	153.01	115.49	211.17	94.00	118.54	59.31
23	E4_Da	NovelBoundary	0	33.63	17.42	23.29	28.82	5.67	5.98	9.20
24	E4a_E5a	KnownJunction	0	132.77	140.03	111.34	187.25	84.88	104.79	61.47
25	I4	Intron	1	39.45	12.06	21.91	20.90	6.83	8.95	5.10
26	I4_SR1	SilentIntronRegion	0	24.82	16.01	17.60	20.62	7.30	8.77	6.13
27	I4_AR1	ActiveIntronRegion	0	31.84	17.40	16.49	29.52	6.37	7.82	8.26
28	I4_AR2	ActiveIntronRegion	0	35.40	11.17	21.44	18.27	8.71	6.66	5.34
29	I4_AR3	ActiveIntronRegion	0	29.15	11.21	19.78	17.54	4.25	6.58	5.39
30	I4_AR4	ActiveIntronRegion	0	25.92	9.50	17.67	16.10	5.45	9.25	4.72
31	I4_AR5	ActiveIntronRegion	1	26.54	7.45	9.19	12.02	4.26	9.88	3.64
32	I4_SR2	SilentIntronRegion	1	51.54	10.81	26.35	22.53	7.28	10.21	4.36
33	ER5a	ExonRegion	0	106.47	153.79	105.19	200.50	79.71	128.99	54.27
34	E5a_E6a	KnownJunction	0	138.69	143.05	116.57	156.86	72.04	86.00	59.25
35	E5a_E8a	NovelJunction	0	0.00	4.89	2.51	1.11	0.90	9.97	0.00
36	I5	Intron	1	24.91	5.00	11.24	8.55	3.22	4.27	3.45
37	I5_SR1	SilentIntronRegion	0	24.99	5.02	11.28	8.58	3.23	4.29	3.47
38	E6_Aa	NovelBoundary	0	35.88	14.79	24.72	20.40	3.53	9.73	8.81
39	ER6a	ExonRegion	0	136.07	149.64	132.21	186.50	97.45	106.45	75.29
40	E6_Da	NovelBoundary	1	59.15	37.57	44.82	16.07	4.08	11.26	9.09
41	E6a_E7a	KnownJunction	0	76.84	116.28	83.64	128.98	68.81	65.61	54.96
42	E6a_E8a	NovelJunction	0	0.93	4.68	3.87	13.06	0.00	3.56	0.00
43	E6a_E9a	NovelJunction	0	0.58	3.81	2.33	9.86	0.00	2.92	0.00
44	ER7a	ExonRegion	0	113.21	152.58	120.34	197.26	123.00	90.16	70.32
45	E7a_E8a	KnownJunction	0	113.99	191.76	112.71	202.15	105.37	96.93	80.36
46	E8_Aa	NovelBoundary	0	28.59	26.95	17.75	27.50	3.14	5.76	7.19
47	ER8a	ExonRegion	0	96.35	189.86	103.42	258.33	90.68	125.78	79.34
48	E8_Da	NovelBoundary	1	60.85	44.35	29.73	58.16	10.56	21.31	8.24
49	E8a_E9a	KnownJunction	0	61.67	152.79	87.30	223.53	118.86	84.29	76.54
50	I8	Intron	0	22.68	21.08	17.37	26.15	3.84	11.29	6.74
51	I8_AR1	ActiveIntronRegion	0	20.93	22.14	14.82	27.74	3.99	12.12	6.03
52	I8_SR1	SilentIntronRegion	0	28.23	19.05	22.94	26.57	3.50	8.97	8.02
53	I8_AR2	ActiveIntronRegion	0	19.82	23.44	14.84	25.98	4.26	13.57	6.41
54	ER9a	ExonRegion	0	86.23	184.10	100.43	228.67	117.83	114.19	98.20
55	E9a_E10a	KnownJunction	0	88.31	205.65	122.79	237.86	138.59	158.07	105.89
56	I9_AR2	ActiveIntronRegion	0	24.06	10.44	19.69	13.71	6.10	8.49	5.90
57	I9_AR4	ActiveIntronRegion	1	33.12	11.62	18.53	12.05	5.36	6.30	3.58
58	E10_Aa	NovelBoundary	1	59.98	21.91	19.53	35.57	8.60	26.45	7.95
59	ER10a	ExonRegion	0	82.39	162.99	104.90	240.09	101.97	120.30	77.14
60	E10_Da	NovelBoundary	0	30.36	15.68	18.09	16.34	6.29	9.59	9.75
61	E10a_E11a	KnownJunction	0	43.34	114.70	61.05	191.75	46.82	70.59	49.54
62	E10a_E12a	NovelJunction	0	13.89	17.39	10.99	35.46	8.69	16.19	4.43
63	ER11a	ExonRegion	0	52.74	120.21	57.76	157.48	53.86	76.30	43.26
64	E11a_E12a	KnownJunction	0	39.66	110.29	73.39	152.22	59.48	79.86	46.38
65	ER12a	ExonRegion	0	53.21	138.85	77.04	208.53	81.35	109.08	53.52
66	E12a_E13a	KnownJunction	0	69.88	164.98	81.98	265.82	100.14	123.98	58.69
67	ER13a	ExonRegion	0	92.40	166.60	104.84	270.88	75.02	170.41	64.15
68	E13a_E14a	KnownJunction	0	99.89	201.61	114.98	303.23	58.85	222.79	60.84
69	I13	Intron	0	20.19	13.11	13.89	12.29	4.10	8.35	7.24
70	I13_SR1	SilentIntronRegion	0	24.82	11.17	16.39	10.86	4.40	7.62	7.49
71	ER14a	ExonRegion	0	103.56	166.09	94.75	263.30	67.08	170.26	54.06
72	E14a_E15a	KnownJunction	0	74.40	150.96	74.55	255.06	32.87	180.31	44.33
73	ER15a	ExonRegion	0	96.87	169.67	85.64	257.82	79.66	154.69	69.74
74	IG8	Intergenic	0	9.51	13.67	10.04	19.52	4.34	15.25	4.55
75	IG8_AR4	ActiveIntergenicRegion	0	0.98	2.43	1.85	3.29	0.81	13.60	0.31
76	IG8_SR3	SilentIntergenicRegion	0	9.15	11.87	9.49	18.01	4.70	14.15	3.81
77	IG8_SR2	SilentIntergenicRegion	0	7.17	14.46	6.81	14.30	2.28	12.44	3.89
78	IG8_AR2	ActiveIntergenicRegion	0	15.71	23.62	15.28	29.23	3.78	22.89	9.67
79	IG8_SR1	SilentIntergenicRegion	0	12.98	24.24	14.94	30.55	3.72	22.48	8.90
80	IG8_AR1	ActiveIntergenicRegion	0	4.69	7.39	3.64	11.55	0.75	10.13	2.93