Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	JAZF1	Gene	0	15.58	40.53	28.23	34.18	57.08	38.58	33.23
2	283928	Transcript	1	7.77	43.71	14.30	38.83	35.60	51.90	38.50
3	ER1a	ExonRegion	1	1.45	6.84	2.87	9.19	10.57	15.18	9.04
4	E1a_E2a	KnownJunction	1	4.99	27.30	11.11	43.70	19.48	79.38	43.28
5	ER2a	ExonRegion	1	1.55	37.86	9.18	44.21	9.68	76.18	39.66
6	E2a_E3a	KnownJunction	1	0.73	36.41	8.81	44.13	10.05	40.76	27.97
7	ER3a	ExonRegion	1	4.19	27.39	8.72	39.91	30.92	46.56	36.62
8	E3a_E4a	KnownJunction	0	4.11	22.91	9.70	15.23	17.47	31.44	17.74
9	I3_AR6	ActiveIntronRegion	1	0.23	10.07	0.00	3.40	0.71	1.50	1.21
10	I3_SR7	SilentIntronRegion	1	1.52	1.42	1.16	4.28	0.00	9.11	2.24
11	I3_AR11	ActiveIntronRegion	1	11.62	28.17	13.83	18.79	0.48	48.46	6.27
12	I3_SR8	SilentIntronRegion	0	10.81	20.44	10.56	18.91	0.13	32.23	6.15
13	I3_AR13	ActiveIntronRegion	0	9.48	21.20	7.19	16.90	1.01	24.93	5.41
14	I3_SR9	SilentIntronRegion	0	16.91	14.62	12.81	13.32	0.34	22.47	6.28
15	I3_AR14	ActiveIntronRegion	0	15.44	15.72	11.33	19.69	0.07	27.19	6.05
16	I3_SR10	SilentIntronRegion	0	7.14	20.55	6.11	18.11	0.19	23.79	8.55
17	E4_Aa	NovelBoundary	1	4.12	23.64	7.20	7.48	0.00	28.11	14.55
18	ER4a	ExonRegion	1	17.13	87.08	21.15	56.70	77.67	62.89	65.28
19	E4_Da	NovelBoundary	1	3.52	10.14	2.16	3.17	0.00	15.79	3.31
20	E4a_E5a	KnownJunction	1	16.81	104.17	22.45	60.87	78.45	76.16	72.82
21	I4	Intron	0	6.55	10.55	3.54	7.31	1.12	9.48	3.29
22	I4_AR1	ActiveIntronRegion	0	3.25	7.48	0.76	5.24	0.37	8.25	3.37
23	I4_AR2	ActiveIntronRegion	0	2.45	14.55	2.46	6.85	0.11	8.71	3.06
24	I4_AR4	ActiveIntronRegion	0	6.02	11.08	3.26	4.13	1.17	12.51	1.85
25	I4_SR4	SilentIntronRegion	0	6.44	8.46	2.96	4.64	0.63	12.02	2.52
26	I4_AR6	ActiveIntronRegion	0	7.74	11.34	4.64	9.42	1.62	10.54	3.60
27	I4_SR5	SilentIntronRegion	0	9.09	19.18	5.09	12.67	2.75	8.12	3.81
28	I4_AR7	ActiveIntronRegion	0	12.82	15.04	6.91	10.65	2.07	14.12	5.99
29	I4_SR6	SilentIntronRegion	0	10.13	8.97	9.07	3.83	2.10	7.30	5.21
30	I4_AR8	ActiveIntronRegion	0	10.66	19.93	7.72	7.65	1.57	17.60	6.20
31	E5_Aa	NovelBoundary	0	8.21	41.04	7.90	29.94	0.88	18.71	7.24
32	ER5a	ExonRegion	0	18.94	43.40	34.69	35.52	66.12	38.53	34.08
33	IG21	Intergenic	0	11.33	5.67	9.26	6.75	15.41	7.55	12.26
34	IG21_AR2	ActiveIntergenicRegion	0	9.34	6.32	7.89	8.08	14.60	9.62	12.59
35	IG21_SR1	SilentIntergenicRegion	0	6.15	4.86	7.79	5.61	17.55	7.97	10.12
36	IG21_AR1	ActiveIntergenicRegion	0	14.37	4.78	11.31	4.91	16.63	4.60	11.90