Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RAPGEF5	Gene	0	27.32	34.12	9.46	1.29	33.94	3.80	6.07
2	405243	Transcript	0	0.66	2.83	0.22	0.00	1.00	0.00	0.36
3	382013	Transcript	0	0	0	0	0	0	0	0
4	344041	Transcript	0	9.33	15.17	4.85	0.06	10.09	0.12	2.61
5	401957	Transcript	0	41.92	48.71	12.39	1.65	31.17	2.78	5.14
6	258735	Transcript	0	24.03	0.00	6.19	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	0.20	5.24	0.10	0.00	0.34	0.00	0.27
8	E1_Ab	KnownBoundary	0	3.37	14.90	0.89	0.00	2.28	0.00	2.98
9	ER1b	ExonRegion	0	5.32	17.79	2.34	0.04	4.24	0.00	3.02
10	E1a_E2a	KnownJunction	0	4.07	22.38	6.58	0.00	11.92	0.00	2.31
11	ER2a	ExonRegion	0	12.37	53.81	7.44	1.64	18.07	1.44	4.21
12	E2a_E3a	KnownJunction	0	15.67	74.16	6.71	5.66	29.46	4.10	6.13
13	ER3a	ExonRegion	0	15.55	53.18	6.58	2.61	18.76	3.41	4.90
14	E3a_E4a	KnownJunction	0	11.32	51.86	5.43	3.09	26.03	2.79	4.56
15	ER4a	ExonRegion	0	21.33	60.28	8.64	3.66	25.23	3.88	7.94
16	E4a_E5a	KnownJunction	0	23.45	64.52	12.80	4.42	37.14	2.20	6.62
17	ER5a	ExonRegion	0	26.27	69.41	12.67	3.48	36.96	3.76	11.63
18	E5a_E6a	KnownJunction	0	17.62	51.12	9.38	3.31	23.05	1.63	12.63
19	ER6a	ExonRegion	0	21.84	50.37	15.95	1.71	35.83	2.84	13.22
20	E6a_E7a	KnownJunction	0	21.56	52.57	15.52	0.00	37.62	4.88	7.60
21	ER7a	ExonRegion	0	27.33	54.15	13.84	0.08	24.31	3.83	7.39
22	E7a_E8a	KnownJunction	0	29.86	50.36	8.26	0.00	22.55	1.61	6.31
23	I7_AR7	ActiveIntronRegion	0	2.66	8.41	1.35	2.49	6.11	0.00	0.67
24	I7_AR8	ActiveIntronRegion	0	3.07	7.46	0.68	2.49	8.91	0.00	0.67
25	ER8a	ExonRegion	0	26.77	58.92	10.27	2.58	23.09	3.05	5.93
26	E8a_E9a	KnownJunction	0	24.72	52.91	10.23	1.08	20.93	4.31	6.85
27	ER9a	ExonRegion	0	27.80	49.15	13.27	1.86	16.58	2.72	6.39
28	E9a_E10a	KnownJunction	0	19.28	52.83	14.37	2.93	9.15	1.31	2.36
29	ER10a	ExonRegion	0	22.10	42.37	9.48	1.17	16.54	4.10	4.06
30	E10a_E11b	KnownJunction	0	0.77	2.63	0.00	0.00	0.00	0.00	0.00
31	E10a_E11d	KnownJunction	0	22.06	39.25	11.54	0.00	24.14	0.00	6.95
32	ER11a	ExonRegion	0	0.43	0.71	0.00	0.00	0.63	0.00	0.00
33	E11_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER11b	ExonRegion	0	2.23	1.20	0.59	0.00	2.76	0.06	0.00
35	E11_Da	KnownBoundary	0	1.80	1.63	0.00	0.00	0.00	0.00	0.00
36	E11_Ac	KnownBoundary	0	1.00	4.41	0.00	0.00	0.00	1.66	0.00
37	ER11c	ExonRegion	0	2.31	4.23	0.00	0.00	0.17	1.23	0.00
38	ER11d	ExonRegion	0	1.00	3.79	0.05	0.00	1.46	0.71	0.05
39	E11_Ad	KnownBoundary	0	2.52	5.36	0.00	0.00	0.99	0.00	0.00
40	ER11e	ExonRegion	0	35.48	38.78	13.17	0.04	32.88	1.77	5.09
41	E11_Db	KnownBoundary	0	0.73	1.50	0.50	0.00	1.01	0.00	0.87
42	E11b_E12a	KnownJunction	0	34.77	37.04	11.31	0.00	37.92	6.24	2.22
43	ER11f	ExonRegion	0	1.12	0.41	0.35	0.00	1.65	0.00	0.46
44	ER12a	ExonRegion	0	44.22	63.33	12.41	2.23	36.05	7.19	7.43
45	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E12b_E14a	KnownJunction	0	62.59	73.09	14.63	2.68	38.77	4.10	8.33
47	ER12b	ExonRegion	0	61.22	78.16	16.26	2.49	45.08	3.68	7.87
48	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER14a	ExonRegion	0	69.06	68.90	19.05	1.35	47.22	7.91	7.97
51	E14a_E15a	KnownJunction	0	49.25	46.79	18.28	4.31	54.29	3.81	8.37
52	ER15a	ExonRegion	0	56.61	55.03	17.18	2.76	44.41	8.26	10.70
53	E15a_E16a	KnownJunction	0	53.64	36.33	13.09	1.44	39.74	6.59	9.33
54	E16a_E17a	KnownJunction	0	40.62	34.78	19.37	3.17	41.73	4.07	9.57
55	ER16a	ExonRegion	0	64.75	47.34	22.73	3.10	46.53	5.30	12.23
56	ER17a	ExonRegion	0	50.49	48.07	21.20	4.18	49.46	3.72	8.46
57	E17a_E18a	KnownJunction	0	47.68	50.68	15.10	4.01	36.93	2.89	9.60
58	ER18a	ExonRegion	0	45.67	46.71	14.00	4.09	29.91	2.62	10.03
59	E18_Da	KnownBoundary	0	45.48	35.23	14.79	1.68	30.20	1.63	6.49
60	E18a_E21b	KnownJunction	0	24.03	0.00	6.19	0.00	0.00	0.00	0.00
61	ER18b	ExonRegion	0	38.91	47.52	16.77	1.58	38.52	1.58	4.12
62	E18b_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	E18b_E19b	KnownJunction	0	43.46	42.90	18.67	1.44	40.18	3.32	4.36
64	ER19a	ExonRegion	0	5.93	6.25	3.00	0.18	6.13	0.35	0.87
65	ER19b	ExonRegion	0	36.16	38.44	14.16	2.01	43.65	3.01	7.16
66	E19a_E20a	KnownJunction	0	29.79	43.06	13.59	4.96	35.48	2.30	6.99
67	ER20a	ExonRegion	0	36.75	45.24	13.89	3.25	36.34	3.97	6.65
68	E20a_E21a	KnownJunction	0	24.35	40.69	6.90	0.00	26.30	2.36	3.68
69	ER21a	ExonRegion	0	25.00	44.39	10.19	2.22	37.13	3.13	5.63
70	E21_Ab	KnownBoundary	0	28.79	34.89	10.61	4.20	35.11	0.00	2.59
71	ER21b	ExonRegion	0	29.13	37.09	9.14	1.96	30.68	0.14	3.57
72	E21a_E22a	KnownJunction	0	31.53	35.05	8.69	0.00	20.17	0.00	5.80
73	ER22a	ExonRegion	0	26.63	37.15	13.42	2.66	27.07	7.36	7.39
74	E22a_E23a	KnownJunction	0	21.63	28.90	17.68	1.68	26.40	1.50	2.32
75	ER23a	ExonRegion	0	41.81	33.13	19.68	1.64	31.70	6.68	5.26
76	E23a_E24a	KnownJunction	0	53.46	45.13	19.07	2.93	34.67	9.70	8.27
77	ER24a	ExonRegion	0	42.55	48.95	19.73	1.62	33.86	4.54	11.07
78	E24a_E25a	KnownJunction	0	36.85	49.23	21.37	0.00	38.13	3.19	6.91
79	ER25a	ExonRegion	0	41.08	53.27	24.35	0.00	33.79	3.62	11.23
80	E25a_E26a	KnownJunction	0	34.55	58.14	18.93	0.00	26.12	5.82	14.49
81	ER26a	ExonRegion	0	28.21	46.89	13.79	0.00	28.36	5.22	14.71
82	E26_Da	NovelBoundary	0	13.42	9.96	7.36	0.00	1.01	0.00	0.60
83	E26a_E27a	KnownJunction	0	19.94	27.14	8.97	0.00	26.28	3.08	10.29
84	I26_AR1	ActiveIntronRegion	0	4.37	10.45	2.28	0.53	3.87	0.56	1.32
85	ER27a	ExonRegion	0	35.49	39.89	11.31	1.41	49.94	5.36	7.81
86	ER27b	ExonRegion	0	1.68	1.10	0.68	0.00	0.00	0.00	0.43
87	IG8_AR5	ActiveIntergenicRegion	0	6.89	8.77	2.12	0.18	0.75	0.54	1.18
88	IG8_SR4	SilentIntergenicRegion	0	7.27	9.84	1.43	0.75	1.93	0.55	2.08
89	IG8_AR3	ActiveIntergenicRegion	0	6.45	12.16	1.03	0.48	1.46	1.18	2.00