Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RPA3	Gene	0	25.66	13.81	18.16	9.32	198.50	10.88	27.04
2	223129	Transcript	0	0.83	0.25	0.25	0.79	0.75	0.51	0.16
3	396682	Transcript	0	0.58	1.34	1.29	0.00	1.13	1.53	0.00
4	406109	Transcript	0	2.97	0.00	0.86	1.41	3.27	0.00	1.96
5	402771	Transcript	0	23.60	10.74	24.84	8.11	148.71	13.80	25.19
6	401447	Transcript	0	0.48	0.76	0.21	0.00	0.50	0.37	0.21
7	ER1a	ExonRegion	0	1.05	0.00	0.00	0.00	0.44	0.00	0.00
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	0.04	0.00	0.00	0.00	0.76	0.00	0.00
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	0.56	0.00	0.00	0.00	1.62	0.00	0.00
12	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER4a	ExonRegion	0	0.35	1.04	0.91	0.56	0.94	1.10	0.00
14	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I4_AR3	ActiveIntronRegion	0	5.16	4.15	1.16	7.30	14.53	8.27	1.20
16	ER5a	ExonRegion	0	1.50	0.53	1.17	3.23	1.60	0.88	0.39
17	E5_Ab	KnownBoundary	0	3.72	1.00	1.37	3.36	1.96	3.32	0.76
18	ER5b	ExonRegion	0	3.54	4.52	1.14	0.62	5.10	4.90	3.41
19	E5_Ac	KnownBoundary	1	3.05	19.68	1.60	2.11	2.74	9.30	4.60
20	ER5c	ExonRegion	0	4.67	5.90	1.47	1.64	6.11	5.85	4.65
21	E5_Da	KnownBoundary	0	6.06	1.63	1.37	3.93	3.39	6.86	0.85
22	E5a_E5d	KnownJunction	0	0.58	1.34	1.29	0.00	1.13	1.53	0.00
23	E5a_E7a	KnownJunction	0	2.97	0.00	0.86	1.41	3.27	0.00	1.96
24	ER5d	ExonRegion	0	4.78	0.96	0.42	4.14	2.13	3.12	1.23
25	E5_Ad	KnownBoundary	0	5.14	0.00	0.00	1.68	4.17	3.19	1.29
26	ER5e	ExonRegion	1	10.64	2.59	5.01	3.98	49.12	1.63	3.45
27	E5_Ae	KnownBoundary	1	33.91	3.94	15.61	3.82	294.38	1.10	5.09
28	ER5f	ExonRegion	0	86.04	30.02	53.83	25.82	1189.84	19.68	106.39
29	E5b_E7a	KnownJunction	0	11.83	34.34	11.31	13.11	80.78	22.11	11.97
30	ER6a	ExonRegion	0	0.96	1.51	0.42	0.00	1.00	0.73	0.42
31	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER7a	ExonRegion	0	91.29	53.75	54.20	31.62	248.21	37.88	75.19
33	E7a_E8a	KnownJunction	0	190.52	59.24	99.74	41.67	545.55	43.90	159.70
34	ER8a	ExonRegion	0	105.75	67.44	71.65	38.75	1056.66	39.32	133.22
35	E8a_E9a	KnownJunction	0	64.46	66.57	57.68	45.11	371.98	51.86	69.71
36	ER9a	ExonRegion	0	78.94	53.48	61.39	28.44	352.44	41.89	73.79
37	E9_Da	KnownBoundary	0	62.77	30.45	62.99	30.86	329.86	41.67	72.96
38	E9_Db	KnownBoundary	0	24.87	6.36	18.12	6.53	325.46	7.24	28.99
39	ER9b	ExonRegion	0	67.91	30.08	69.23	26.70	433.30	37.71	83.21
40	E9_Dc	KnownBoundary	0	3.10	1.63	4.41	0.00	59.71	1.66	7.11
41	E9_Dd	KnownBoundary	0	28.59	5.70	24.73	10.32	117.34	15.06	18.24
42	ER9c	ExonRegion	0	66.09	27.25	63.38	27.43	406.43	29.86	70.01
43	ER9d	ExonRegion	0	58.71	18.71	51.07	24.44	358.76	25.50	55.86
44	ER9e	ExonRegion	0	23.60	10.74	24.84	8.11	148.71	13.80	25.19
45	IG27_AR9	ActiveIntergenicRegion	0	0.60	0.70	0.22	1.83	15.15	0.00	1.47
46	IG27_AR8	ActiveIntergenicRegion	0	3.07	1.21	1.35	1.25	23.79	0.00	3.37
47	IG27_AR7	ActiveIntergenicRegion	0	3.07	1.21	1.94	1.25	22.56	0.00	2.89
48	IG27_SR6	SilentIntergenicRegion	0	0.62	0.67	0.77	0.13	11.00	0.61	0.77
49	IG27_AR6	ActiveIntergenicRegion	0	1.52	0.80	2.32	0.41	23.29	1.21	1.45
50	IG27_AR4	ActiveIntergenicRegion	0	16.93	12.83	12.92	17.10	26.93	13.01	6.10
51	IG27_AR3	ActiveIntergenicRegion	0	12.74	7.03	14.37	14.24	14.41	14.32	5.61
52	IG27_SR3	SilentIntergenicRegion	0	13.67	11.50	15.11	14.54	18.96	14.93	8.27
53	IG27_SR2	SilentIntergenicRegion	0	14.33	21.13	23.00	17.86	16.00	19.62	13.76
54	IG27_AR2	ActiveIntergenicRegion	0	10.76	17.62	21.79	20.78	16.06	15.12	9.56
55	IG27_SR1	SilentIntergenicRegion	0	9.86	9.13	14.52	7.35	11.32	8.66	4.85