Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ITGB8 Gene 0 665.77 272.58 529.54 111.67 12.88 32.90 192.62 2 222573 Transcript 0 932.63 465.67 628.95 162.67 15.14 44.52 222.17 3 IG43_SR1 SilentIntergenicRegion 0 21.33 70.16 0.00 0.00 1.98 4.16 10.71 4 IG43_AR1 ActiveIntergenicRegion 0 1.29 7.58 0.00 0.00 9.50 3.08 0.18 5 IG43_SR2 SilentIntergenicRegion 0 3.88 7.78 0.00 0.00 0.51 1.75 1.54 6 IG43_AR3 ActiveIntergenicRegion 0 2.47 11.38 0.00 0.00 6.98 0.00 2.78 7 IG43_AR5 ActiveIntergenicRegion 0 1.30 10.85 0.17 0.00 27.60 0.31 2.75 8 IG43_AR6 ActiveIntergenicRegion 0 2.27 11.40 0.00 0.42 19.53 0.51 3.11 9 IG43_AR18 ActiveIntergenicRegion 0 47.43 35.08 14.96 15.65 8.53 8.17 5.23 10 IG43_AR19 ActiveIntergenicRegion 0 29.78 18.74 14.81 11.63 3.16 3.55 2.30 11 IG43_AR20 ActiveIntergenicRegion 0 12.42 5.87 11.60 3.42 1.10 2.45 0.52 12 IG43_SR20 SilentIntergenicRegion 0 17.32 11.21 14.30 7.53 0.75 1.97 2.19 13 IG43_AR21 ActiveIntergenicRegion 0 26.92 132.68 17.35 16.01 0.41 13.27 7.75 14 ER1a ExonRegion 0 154.37 397.88 134.34 80.76 2.96 38.16 49.93 15 E1a_E2a KnownJunction 0 288.59 519.18 320.54 117.55 4.59 44.01 111.86 16 ER2a ExonRegion 0 355.99 660.66 367.49 144.78 6.60 52.32 126.79 17 E2a_E3a KnownJunction 0 487.88 719.08 417.52 186.20 6.04 49.79 144.25 18 ER3a ExonRegion 0 730.28 845.09 677.02 206.76 14.34 64.91 211.21 19 E3a_E4a KnownJunction 0 937.29 686.32 762.99 157.75 18.12 51.70 191.54 20 E3a_E5a NovelJunction 0 6.78 5.88 24.36 15.47 0.00 1.13 0.00 21 ER4a ExonRegion 0 1322.84 865.98 1075.35 224.02 17.17 75.91 257.05 22 E4a_E5a KnownJunction 0 903.64 790.59 784.75 251.87 18.47 67.32 241.97 23 ER5a ExonRegion 0 1195.87 803.92 843.55 258.20 23.26 74.31 273.97 24 E5a_E6a KnownJunction 0 1804.15 834.17 1031.32 282.32 18.21 77.80 344.74 25 E5a_E7a NovelJunction 1 24.07 30.55 23.70 30.37 0.00 2.39 2.77 26 I5_AR1 ActiveIntronRegion 1 6.32 68.01 5.95 4.07 0.95 6.44 3.27 27 ER6a ExonRegion 0 1545.25 852.38 935.41 269.66 24.32 82.53 337.74 28 E6_Da NovelBoundary 1 78.98 390.13 59.95 46.24 6.39 23.85 18.36 29 E6a_E7a KnownJunction 1 1526.26 387.98 813.32 188.12 30.59 24.28 251.12 30 I6_AR1 ActiveIntronRegion 1 19.16 131.08 20.62 9.37 0.73 15.78 7.61 31 ER7a ExonRegion 0 1368.18 309.85 768.43 163.95 22.59 30.75 257.11 32 E7a_E8a KnownJunction 0 1241.30 291.17 704.10 149.87 25.24 37.55 249.38 33 ER8a ExonRegion 0 1183.31 334.19 683.34 172.88 13.89 43.44 224.28 34 E8a_E9a KnownJunction 1 1433.18 382.12 808.39 213.02 13.49 65.74 213.71 35 E8a_E10a NovelJunction 0 4.97 2.47 8.51 8.05 0.00 0.00 0.53 36 ER9a ExonRegion 0 1121.84 327.19 682.65 152.53 13.41 39.79 238.33 37 E9a_E10a KnownJunction 0 682.97 262.43 483.85 113.95 8.74 31.38 191.34 38 ER10a ExonRegion 0 762.29 296.12 563.27 135.05 12.29 29.46 245.24 39 E10a_E11a KnownJunction 1 976.31 354.09 598.40 154.20 19.39 20.45 263.68 40 ER11a ExonRegion 0 681.33 297.26 419.86 126.26 15.70 26.64 276.19 41 E11a_E12a KnownJunction 0 681.55 297.10 434.08 109.26 16.78 34.14 256.55 42 ER12a ExonRegion 0 835.27 291.38 547.64 124.48 14.56 39.89 270.45 43 E12a_E13a KnownJunction 0 933.17 236.71 583.58 121.04 18.90 34.60 220.86 44 ER13a ExonRegion 0 815.00 199.64 553.48 107.58 10.01 23.29 201.30 45 E13a_E14a KnownJunction 0 583.18 158.15 455.27 85.61 5.79 14.93 154.94 46 ER14a ExonRegion 0 629.80 172.45 531.79 94.51 13.34 26.91 193.16 47 IG44_SR1 SilentIntergenicRegion 0 3.06 0.00 5.53 0.38 0.00 0.70 7.53 48 IG44_AR3 ActiveIntergenicRegion 0 3.25 1.54 5.13 2.84 0.18 0.49 8.16