Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 RPS6KA2 Gene 0 64.21 40.90 32.48 26.86 60.17 19.41 395.83 2 405189 Transcript 0 0.04 0.05 0.03 0.03 1.99 0.00 0.22 3 366866 Transcript 0 0.00 0.00 1.41 1.68 1.15 0.00 0.00 4 265678 Transcript 0 0.00 0.00 0.00 1.25 0.00 0.00 0.34 5 366863 Transcript 0 0 0 0 0 0 0 0 6 366865 Transcript 0 0.29 0.00 0.00 0.00 0.68 0.00 0.54 7 ER1a ExonRegion 0 0.00 0.00 0.66 0.00 4.45 0.00 0.00 8 E1a_E2a KnownJunction 0 0.00 0.00 1.37 0.00 8.55 0.00 0.00 9 ER2a ExonRegion 0 0.00 0.00 0.82 0.73 5.75 0.00 0.00 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.97 0.00 0.00 11 E2a_E5a KnownJunction 0 0.00 0.00 1.41 1.68 1.15 0.00 0.00 12 ER3a ExonRegion 0 0.12 0.14 0.08 0.10 2.83 0.00 0.65 13 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 2.19 0.00 0.00 14 ER4a ExonRegion 0 0.00 0.00 0.00 1.25 0.00 0.00 0.34 15 ER4b ExonRegion 0 5.35 15.10 2.86 8.64 4.48 4.48 41.60 16 E4a_E5a KnownJunction 1 12.17 47.68 13.24 32.56 28.17 17.26 235.24 17 E4a_E6a NovelJunction 1 0.58 9.54 0.00 0.00 2.10 0.00 3.47 18 ER5a ExonRegion 0 30.41 54.78 20.52 43.90 31.38 24.56 312.97 19 E5a_E6a KnownJunction 0 37.39 49.15 24.36 37.06 35.27 14.69 324.21 20 ER6a ExonRegion 0 39.32 78.11 27.34 53.76 41.90 35.82 455.61 21 E6a_E7a KnownJunction 0 36.02 77.61 35.29 49.58 40.27 28.38 414.75 22 ER7a ExonRegion 0 42.42 82.51 37.89 39.88 69.56 22.37 473.87 23 E7_Ab KnownBoundary 1 45.36 83.20 36.83 34.27 92.83 22.06 464.07 24 ER7b ExonRegion 0 42.78 80.07 35.20 33.82 76.52 28.35 469.09 25 E7a_E8a KnownJunction 0 43.43 83.67 31.21 34.00 68.58 29.85 427.51 26 ER8a ExonRegion 0 42.74 81.91 27.23 37.39 58.79 22.70 412.24 27 E8a_E9a KnownJunction 0 44.16 77.71 30.03 40.20 61.34 22.78 395.82 28 ER9a ExonRegion 0 50.70 86.60 32.61 48.51 70.36 20.22 471.78 29 E9a_E10a KnownJunction 1 38.57 71.93 31.69 32.43 91.70 10.18 328.92 30 ER10a ExonRegion 1 49.58 89.55 38.00 45.74 84.69 19.91 525.72 31 E10a_E11a KnownJunction 0 39.61 73.32 26.69 43.10 85.48 20.45 502.03 32 ER11a ExonRegion 0 46.67 67.76 22.59 41.05 63.25 19.57 476.77 33 E11_Da NovelBoundary 1 6.39 11.80 3.32 1.68 5.33 0.00 2.41 34 E11a_E12a KnownJunction 0 38.05 49.60 18.90 29.15 63.60 15.22 374.35 35 ER12a ExonRegion 0 36.35 40.55 21.05 29.51 63.75 21.07 420.77 36 E12a_E13a KnownJunction 0 45.58 40.67 23.08 22.95 52.58 23.32 497.60 37 ER13a ExonRegion 0 37.31 59.88 19.83 27.11 51.83 25.53 458.34 38 E13a_E14a KnownJunction 0 0.00 1.44 0.00 0.00 0.00 0.00 0.62 39 E13a_E15a KnownJunction 0 31.24 63.79 17.88 27.69 41.17 29.59 343.31 40 ER14a ExonRegion 0 0.74 0.00 0.00 0.00 0.00 0.00 0.51 41 E14_Da KnownBoundary 0 0.88 0.00 0.00 0.00 0.00 0.00 0.87 42 ER14b ExonRegion 0 0.29 0.00 0.00 0.00 0.68 0.00 0.54 43 ER15a ExonRegion 0 35.58 50.95 24.71 23.29 55.61 24.69 409.06 44 E15a_E16a KnownJunction 0 43.04 40.54 28.07 21.89 55.10 24.20 477.68 45 ER16a ExonRegion 0 47.67 52.42 30.14 23.38 50.50 23.38 481.50 46 E16a_E17a KnownJunction 0 41.46 41.01 27.58 22.49 34.81 26.69 370.02 47 ER17a ExonRegion 0 54.25 46.73 35.03 27.53 70.13 22.63 559.84 48 E17a_E18a KnownJunction 0 56.36 39.64 38.30 25.09 75.13 19.54 538.04 49 ER18a ExonRegion 0 47.07 52.86 34.61 28.99 63.98 27.37 544.55 50 E18a_E19a KnownJunction 0 66.01 56.09 25.08 30.37 75.45 27.71 603.73 51 ER19a ExonRegion 0 50.91 60.36 35.66 30.65 91.01 23.44 618.07 52 E19a_E20a KnownJunction 1 33.78 53.33 34.09 39.47 70.40 16.67 533.50 53 ER20a ExonRegion 0 44.18 58.92 28.93 37.32 69.79 15.27 489.67 54 E20a_E21a KnownJunction 0 42.13 59.16 32.92 45.81 77.18 19.56 505.76 55 ER21a ExonRegion 0 77.97 44.62 40.98 35.14 85.76 18.03 462.03 56 E21a_E22a KnownJunction 0 90.43 33.60 40.54 25.47 82.11 20.64 440.29 57 ER22a ExonRegion 0 107.40 46.01 52.20 40.26 104.37 20.95 549.80 58 E22a_E23a KnownJunction 0 139.44 52.67 60.66 43.54 117.45 27.76 589.29 59 ER23a ExonRegion 0 102.16 47.61 46.26 38.74 90.07 18.50 540.83 60 E23a_E24a KnownJunction 0 69.18 45.79 23.57 30.86 67.73 17.07 502.76 61 ER24a ExonRegion 0 64.93 46.40 34.98 37.08 72.60 15.21 453.58 62 E24a_E25a KnownJunction 0 47.15 53.17 24.88 26.25 61.90 14.82 438.48 63 ER25a ExonRegion 0 30.23 38.62 13.17 24.23 40.39 17.10 283.78 64 E25_Da KnownBoundary 1 22.35 41.14 15.49 24.08 25.47 11.23 270.59 65 ER25b ExonRegion 0 82.18 36.64 38.86 25.59 66.40 21.21 417.51