Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AL096711.9	Gene	0	0.57	2.31	3.04	3.09	17.66	2.02	0.26
2	368268	Transcript	0	0.47	2.80	4.79	3.50	25.69	3.40	0.17
3	IG27_AR2	ActiveIntergenicRegion	0	1.47	0.18	2.19	0.00	11.85	0.25	0.65
4	IG27_SR2	SilentIntergenicRegion	0	4.83	1.27	11.20	0.00	2.14	0.50	0.70
5	IG27_AR1	ActiveIntergenicRegion	0	3.99	0.21	9.97	0.24	1.04	0.32	0.83
6	IG27_SR1	SilentIntergenicRegion	0	5.47	0.00	10.13	0.84	0.59	1.70	1.67
7	ER1a	ExonRegion	0	0.57	2.29	1.30	1.88	9.72	0.76	0.25
8	E1a_E2a	KnownJunction	0	0.00	7.62	3.10	10.05	61.32	7.16	0.00
9	I1	Intron	0	5.54	0.00	9.83	1.02	0.62	0.40	1.55
10	I1_SR2	SilentIntronRegion	0	8.33	0.00	12.83	1.38	0.35	0.00	2.73
11	I1_AR1	ActiveIntronRegion	0	5.95	0.00	12.05	1.69	0.81	0.75	1.89
12	E2_Aa	NovelBoundary	0	11.27	0.00	9.24	1.68	0.00	3.51	1.35
13	ER2a	ExonRegion	0	4.06	5.25	12.84	7.73	45.42	5.60	0.44
14	E2a_E3a	KnownJunction	0	0.00	1.63	8.90	8.64	68.33	4.80	0.00
15	ER3a	ExonRegion	0	0.73	4.47	9.62	6.53	47.90	4.34	0.01
16	E3_Da	NovelBoundary	0	0.00	2.94	0.00	1.25	13.16	0.00	0.00
17	E3a_E4a	KnownJunction	0	0.00	4.26	15.23	1.68	32.78	3.30	0.00
18	ER4a	ExonRegion	0	0.67	6.33	9.80	2.29	38.57	6.30	0.83
19	E4a_E5a	KnownJunction	0	0.73	7.36	5.98	6.96	40.55	13.45	0.69
20	ER5a	ExonRegion	0	0.24	2.58	3.27	4.79	24.82	3.17	0.38
21	E5_Da	NovelBoundary	0	0.00	0.00	0.89	0.00	12.59	0.00	0.00
22	E5a_E6a	KnownJunction	0	0.00	0.00	0.82	1.41	11.37	1.66	0.00
23	Ix	Intron	0	0.35	0.84	4.72	1.72	37.60	2.33	0.08
24	Ix_SR1	SilentIntronRegion	0	0.37	0.89	4.97	1.82	39.51	2.47	0.08
25	ER6a	ExonRegion	0	0.00	0.30	0.92	0.52	4.58	0.46	0.00
26	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00