Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KATNA1	Gene	0	70.81	127.49	98.36	205.92	81.38	220.87	51.57
2	367411	Transcript	0	0	0	0	0	0	0	0
3	335643	Transcript	0	1.03	4.94	1.24	5.81	0.00	3.06	0.32
4	335647	Transcript	0	4.63	3.99	3.56	7.75	3.67	3.87	1.81
5	IG42_AR3	ActiveIntergenicRegion	0	147.91	70.89	173.07	98.67	88.16	115.60	56.71
6	ER1a	ExonRegion	0	15.98	43.50	20.97	84.74	19.61	93.23	14.94
7	E1a_E2b	KnownJunction	0	25.85	63.76	41.95	127.25	18.44	144.34	20.12
8	E1a_E3a	NovelJunction	0	1.87	8.85	2.04	8.40	2.03	8.58	2.01
9	ER2a	ExonRegion	0	0.82	2.21	1.19	3.97	0.66	4.98	0.76
10	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2b	ExonRegion	0	58.83	124.29	94.18	209.41	65.58	261.33	49.65
12	E2a_E3a	KnownJunction	0	71.77	157.50	113.97	272.64	60.74	264.22	49.72
13	ER3a	ExonRegion	0	102.96	185.50	148.10	277.48	123.72	298.55	70.44
14	E3a_E4a	KnownJunction	0	126.19	210.20	166.48	300.71	181.98	328.38	77.53
15	ER4a	ExonRegion	0	124.97	192.37	164.68	298.75	130.88	321.48	73.11
16	E4a_E5a	KnownJunction	0	114.06	123.95	132.71	235.18	166.33	304.45	66.23
17	E4a_E6a	NovelJunction	0	1.00	7.86	8.61	15.47	2.03	20.93	2.91
18	E4a_E7a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	0.00	0.00
19	ER5a	ExonRegion	0	78.24	134.76	131.76	202.63	110.78	223.83	55.41
20	E5a_E6a	KnownJunction	0	58.88	128.81	103.01	201.50	78.96	192.15	47.52
21	ER6a	ExonRegion	0	71.70	126.59	101.51	172.88	93.30	176.14	50.83
22	E6a_E7a	KnownJunction	0	73.09	103.88	93.71	127.49	123.40	122.53	53.96
23	E6a_E8a	NovelJunction	1	9.36	20.91	15.76	37.66	2.31	14.74	3.65
24	I6	Intron	0	16.49	6.32	13.21	10.29	1.52	14.15	2.22
25	I6_SR2	SilentIntronRegion	1	31.31	7.74	22.64	21.82	2.16	22.73	3.51
26	I6_AR1	ActiveIntronRegion	0	22.81	9.84	16.74	11.61	1.26	16.41	3.06
27	ER7a	ExonRegion	0	85.21	134.75	98.11	204.95	91.55	191.70	55.31
28	E7a_E8a	KnownJunction	0	87.76	156.66	104.26	243.66	80.57	221.53	57.17
29	I7	Intron	0	21.54	11.57	15.20	19.31	3.36	20.06	4.84
30	I7_AR1	ActiveIntronRegion	0	27.19	15.16	22.35	23.92	3.57	25.36	5.09
31	I7_SR1	SilentIntronRegion	0	20.75	10.92	13.73	18.70	3.37	19.15	4.99
32	E8_Aa	NovelBoundary	1	30.99	10.30	14.73	35.79	4.96	17.69	3.73
33	ER8a	ExonRegion	0	84.40	152.18	97.00	252.91	98.66	245.65	57.30
34	E8_Da	NovelBoundary	1	22.87	20.10	18.61	29.69	4.31	26.48	4.51
35	E8a_E9a	KnownJunction	0	87.20	117.22	102.43	233.63	131.79	175.48	51.46
36	I8	Intron	0	22.95	18.08	31.46	30.58	4.95	27.51	9.33
37	I8_AR1	ActiveIntronRegion	0	17.71	19.16	20.98	20.14	3.36	24.59	8.94
38	I8_SR1	SilentIntronRegion	0	25.22	17.72	35.94	35.04	5.63	28.85	9.53
39	E9_Aa	NovelBoundary	0	32.48	22.36	29.62	33.62	0.88	28.62	11.58
40	ER9a	ExonRegion	0	72.35	143.70	107.57	269.79	102.79	225.94	62.62
41	E9a_E10a	KnownJunction	0	58.43	153.06	98.22	296.84	75.94	265.69	58.29
42	E9a_E11a	KnownJunction	0	2.07	9.88	2.49	9.94	0.00	6.11	0.64
43	ER10a	ExonRegion	0	73.90	154.18	111.31	290.80	97.88	276.73	63.45
44	E10_Da	NovelBoundary	1	32.80	19.91	33.74	42.59	10.21	40.92	1.85
45	E10a_E11a	KnownJunction	0	48.00	140.18	79.55	230.00	75.45	231.26	47.52
46	I10	Intron	0	15.01	8.62	22.28	16.85	5.18	22.42	8.35
47	I10_AR3	ActiveIntronRegion	0	16.88	9.69	25.05	18.95	5.71	25.20	9.38
48	E11_Aa	NovelBoundary	0	31.33	29.24	33.78	31.05	6.27	58.45	19.95
49	ER11a	ExonRegion	0	64.19	111.50	88.29	170.22	57.92	220.78	50.54
50	ER11b	ExonRegion	0	8.45	5.77	5.93	11.53	6.68	2.76	2.87