Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	REPS1	Gene	0	255.20	191.02	156.44	149.72	375.55	122.89	200.97
2	409553	Transcript	1	2.31	17.82	0.00	2.49	8.64	5.72	0.90
3	367668	Transcript	1	32.56	45.50	28.67	25.90	16.18	32.00	8.41
4	367672	Transcript	0	0	0	0	0	0	0	0
5	258062	Transcript	0	17.97	6.09	15.33	6.24	17.47	8.80	15.08
6	409812	Transcript	0	0	0	0	0	0	0	0
7	367663	Transcript	0	305.99	220.12	167.48	166.37	404.80	144.22	247.08
8	ER1a	ExonRegion	0	2.31	17.82	0.00	2.49	8.64	5.72	0.90
9	ER1b	ExonRegion	0	1.78	35.57	3.27	19.51	7.05	12.93	6.23
10	E1_Ac	KnownBoundary	0	4.51	16.76	4.56	14.95	9.54	14.26	12.51
11	ER1c	ExonRegion	0	46.00	102.41	35.94	71.50	61.98	51.26	46.77
12	E1a_E2a	KnownJunction	0	118.55	208.70	101.76	168.21	207.75	121.62	118.62
13	E1a_E3a	NovelJunction	1	5.37	21.86	2.47	5.36	2.33	12.11	0.00
14	ER2a	ExonRegion	0	223.37	237.37	180.66	198.33	303.38	139.47	194.27
15	E2a_E3a	KnownJunction	0	226.65	280.66	223.93	155.31	534.60	142.60	218.96
16	E3_Aa	NovelBoundary	1	98.35	0.00	99.79	1.38	1.13	0.00	4.59
17	ER3a	ExonRegion	0	373.46	352.56	273.71	262.32	497.65	209.64	296.52
18	E3a_E4a	KnownJunction	0	513.30	323.45	330.43	262.16	889.98	217.37	327.13
19	ER4a	ExonRegion	0	401.36	303.52	222.77	239.81	489.37	185.34	281.50
20	E4a_E5a	KnownJunction	0	379.35	254.39	187.66	195.00	501.26	197.09	248.52
21	E4a_E8a	NovelJunction	0	3.89	7.83	3.54	9.02	2.90	11.47	4.31
22	ER5a	ExonRegion	0	480.39	315.01	256.61	245.98	576.34	206.23	290.19
23	E5a_E6a	KnownJunction	0	273.71	242.72	178.90	215.59	339.34	132.98	225.98
24	E5a_E8a	NovelJunction	0	0.00	8.07	1.31	4.14	0.00	13.53	0.00
25	ER6a	ExonRegion	0	269.00	224.53	204.10	187.86	390.51	121.60	255.03
26	E6a_E7a	KnownJunction	0	292.61	173.52	249.17	170.46	388.05	96.96	263.90
27	E6a_E8a	NovelJunction	0	2.74	37.94	2.69	19.67	1.94	21.06	0.00
28	E7_Aa	NovelBoundary	1	105.63	4.31	101.33	0.00	85.76	0.00	1.25
29	ER7a	ExonRegion	0	273.82	168.87	242.71	158.58	429.22	96.53	277.84
30	E7a_E8a	KnownJunction	0	264.35	168.56	223.00	139.98	466.17	98.36	280.78
31	ER8a	ExonRegion	0	348.30	274.71	284.47	215.27	518.48	151.90	345.13
32	E8a_E9a	KnownJunction	0	354.04	324.48	297.68	239.95	571.23	171.01	370.24
33	E9_Aa	NovelBoundary	1	138.63	2.50	111.69	0.00	1.18	0.00	4.21
34	ER9a	ExonRegion	0	327.15	309.01	258.00	250.58	556.60	193.46	391.57
35	E9a_E10a	KnownJunction	0	142.11	172.81	135.80	164.01	293.21	73.19	221.29
36	E9a_E11a	KnownJunction	0	201.75	82.57	113.63	58.92	155.56	106.48	94.37
37	ER10a	ExonRegion	0	150.68	210.47	139.74	155.75	359.76	88.09	226.80
38	E10a_E11a	KnownJunction	0	147.94	211.41	139.29	141.44	426.09	90.88	235.24
39	ER11a	ExonRegion	0	386.05	290.05	286.96	250.07	938.35	206.73	420.85
40	E11a_E12a	KnownJunction	0	490.33	293.03	349.83	299.82	1517.98	204.32	485.13
41	ER12a	ExonRegion	0	644.45	307.16	387.01	250.86	765.44	233.17	452.15
42	E12a_E13a	KnownJunction	0	296.53	211.85	157.31	162.84	385.03	146.22	240.85
43	E12a_E13b	KnownJunction	0	75.89	47.39	49.82	37.06	117.96	35.21	52.02
44	E12a_E14a	NovelJunction	0	9.86	13.56	5.92	8.64	2.31	9.11	0.60
45	E12a_E15a	KnownJunction	0	13.17	14.13	6.44	24.25	0.00	13.05	0.89
46	ER13a	ExonRegion	0	315.44	228.39	177.64	169.90	424.56	142.22	253.31
47	ER13b	ExonRegion	0	428.65	218.78	269.35	165.90	644.45	130.81	375.96
48	E13a_E14a	KnownJunction	0	635.45	200.92	389.35	171.00	1263.90	140.65	543.71
49	E13a_E15a	NovelJunction	0	13.42	15.68	6.18	11.68	9.34	8.52	1.92
50	ER14a	ExonRegion	0	395.17	185.56	201.88	145.17	779.57	108.33	327.99
51	E14a_E15a	KnownJunction	0	310.17	168.50	144.19	125.32	628.60	96.80	213.37
52	ER15a	ExonRegion	0	310.99	185.85	142.92	141.46	570.38	129.31	256.37
53	E15a_E16a	KnownJunction	0	297.67	183.27	127.02	172.43	408.93	145.98	293.49
54	E16_Aa	NovelBoundary	1	128.45	0.00	50.60	0.00	1.18	0.00	4.53
55	ER16a	ExonRegion	0	459.58	254.57	196.04	197.60	651.17	184.67	296.24
56	E16a_E17a	KnownJunction	0	434.02	227.96	177.29	185.76	699.98	171.79	203.91
57	ER17a	ExonRegion	0	490.20	282.44	213.87	239.82	688.46	216.09	254.19
58	E17a_E18a	KnownJunction	0	551.30	306.98	271.60	293.45	1038.48	259.82	338.06
59	ER18a	ExonRegion	0	516.97	321.94	239.65	265.70	667.55	248.51	275.89
60	E18a_E19a	KnownJunction	0	328.89	237.76	159.91	200.96	429.75	207.00	252.35
61	E18a_E20a	KnownJunction	1	32.56	45.50	28.67	25.90	16.18	32.00	8.41
62	ER19a	ExonRegion	0	354.29	250.43	178.40	198.06	555.04	188.49	257.28
63	E19a_E20a	KnownJunction	0	290.54	173.05	141.59	128.33	342.68	145.50	181.74
64	ER20a	ExonRegion	0	168.14	137.17	99.97	96.49	249.30	111.67	120.96
65	E20_Da	KnownBoundary	0	38.97	16.50	20.56	12.60	21.65	10.96	13.90
66	E20_Db	KnownBoundary	0	13.50	1.08	19.36	5.66	26.14	0.00	8.05
67	ER20b	ExonRegion	0	47.56	20.25	36.50	15.38	44.63	11.31	23.31
68	ER20c	ExonRegion	0	17.97	6.09	15.33	6.24	17.47	8.80	15.08
69	IG28	Intergenic	0	7.29	3.11	8.02	5.50	8.69	2.92	5.44
70	IG28_AR1	ActiveIntergenicRegion	0	7.32	3.12	8.06	5.52	8.73	2.93	5.47