Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PHF3	Gene	0	124.92	104.26	201.07	110.61	194.45	112.06	48.59
2	262043	Transcript	0	14.52	21.07	19.77	23.99	35.18	17.90	8.19
3	393387	Transcript	0	11.14	15.19	18.97	22.45	31.99	17.16	9.11
4	ER1a	ExonRegion	0	7.88	30.63	8.32	21.02	15.43	18.31	3.77
5	E1a_E2b	KnownJunction	1	25.67	29.11	31.15	46.16	76.17	27.90	15.46
6	E1a_E3a	NovelJunction	0	31.59	58.32	46.47	29.91	21.05	34.65	13.40
7	ER2a	ExonRegion	0	11.14	15.19	18.97	22.45	31.99	17.16	9.11
8	ER2b	ExonRegion	0	43.00	64.22	71.76	73.81	68.49	64.12	24.72
9	E2a_E3a	KnownJunction	0	44.76	81.65	88.49	82.38	66.76	74.40	20.36
10	ER3a	ExonRegion	0	107.19	148.48	169.57	139.11	127.28	123.86	44.21
11	E3a_E4a	KnownJunction	0	159.71	188.94	245.66	156.88	159.36	131.16	68.55
12	ER4a	ExonRegion	0	148.52	145.35	258.98	134.64	193.62	112.50	54.95
13	E4a_E5a	KnownJunction	0	78.96	74.72	155.14	88.26	170.64	76.00	33.95
14	E4a_E6a	NovelJunction	0	3.37	1.05	7.23	10.67	1.11	3.24	0.89
15	ER5a	ExonRegion	0	110.84	101.05	196.37	93.30	172.07	84.60	49.11
16	E5a_E6a	KnownJunction	0	135.92	86.07	180.22	50.04	128.68	47.22	31.36
17	ER6a	ExonRegion	0	162.87	91.54	228.87	100.36	187.97	92.46	40.34
18	E6a_E7a	KnownJunction	0	202.98	104.43	224.26	127.41	219.62	94.39	42.64
19	ER7a	ExonRegion	0	177.93	121.91	249.80	128.17	192.18	97.18	43.99
20	E7a_E8a	KnownJunction	0	138.41	113.36	214.62	105.14	144.43	78.26	34.04
21	ER8a	ExonRegion	0	132.83	78.97	243.19	95.22	178.04	86.42	47.62
22	E8a_E9a	KnownJunction	0	96.02	54.80	189.96	93.82	133.22	60.11	47.42
23	ER9a	ExonRegion	0	81.74	87.73	191.10	125.53	114.09	84.58	55.45
24	E9a_E10a	KnownJunction	0	87.69	82.89	191.84	119.15	124.37	85.68	44.66
25	ER10a	ExonRegion	0	112.91	101.10	195.69	134.62	151.29	102.42	50.64
26	E10a_E11a	KnownJunction	0	65.44	101.43	150.79	126.33	124.19	112.93	29.57
27	ER11a	ExonRegion	0	112.97	120.84	210.22	116.15	176.22	115.47	49.74
28	E11a_E12a	KnownJunction	0	113.46	123.92	209.51	99.80	252.36	118.40	49.27
29	ER12a	ExonRegion	0	89.39	109.76	188.75	114.26	196.60	85.78	53.51
30	E12a_E13a	KnownJunction	0	51.61	108.34	121.29	113.21	169.51	87.34	41.93
31	ER13a	ExonRegion	0	77.07	95.44	181.22	108.99	192.37	86.13	60.75
32	E13a_E14a	KnownJunction	0	72.42	97.31	160.13	133.64	208.49	140.91	54.45
33	ER14a	ExonRegion	0	88.37	109.34	198.79	122.48	215.33	114.85	56.65
34	E14a_E15a	KnownJunction	0	120.28	109.45	270.64	129.71	296.14	97.31	62.26
35	ER15a	ExonRegion	0	139.53	120.31	282.45	148.45	261.84	130.72	74.01
36	E15a_E16a	KnownJunction	0	136.39	126.00	257.67	144.34	219.49	124.99	58.06
37	ER16a	ExonRegion	0	173.72	122.42	251.21	140.04	294.20	169.81	63.81
38	E16_Da	KnownBoundary	0	15.15	1.63	28.32	3.22	31.21	3.75	5.17
39	ER16b	ExonRegion	0	10.02	3.47	19.82	4.79	13.95	7.49	5.33
40	IG21	Intergenic	0	8.23	2.08	11.92	4.01	6.34	5.07	4.00
41	IG21_SR1	SilentIntergenicRegion	0	10.58	2.42	15.34	3.81	8.39	4.59	3.93
42	IG21_AR2	ActiveIntergenicRegion	0	13.56	3.39	15.78	8.56	9.50	10.57	4.91
43	IG21_SR2	SilentIntergenicRegion	0	9.08	2.96	14.18	3.68	5.80	7.78	3.61
44	IG21_SR3	SilentIntergenicRegion	0	4.49	1.24	9.14	2.58	4.15	0.26	2.80
45	IG21_AR6	ActiveIntergenicRegion	0	4.67	1.21	11.85	1.25	3.88	0.53	3.28
46	IG21_AR7	ActiveIntergenicRegion	0	3.37	2.52	9.15	2.80	5.45	1.06	4.93
47	IG21_AR10	ActiveIntergenicRegion	0	5.51	0.00	10.88	1.69	3.10	6.49	4.56
48	IG21_AR11	ActiveIntergenicRegion	0	4.72	0.00	9.97	2.49	4.97	5.95	5.01
49	IG21_AR12	ActiveIntergenicRegion	0	7.95	0.00	10.97	3.74	7.37	3.86	4.38
50	IG21_AR13	ActiveIntergenicRegion	0	7.68	0.00	11.68	3.74	6.48	4.29	5.40
51	IG21_AR14	ActiveIntergenicRegion	0	5.55	0.00	10.09	4.71	5.13	3.68	4.95
52	IG21_AR15	ActiveIntergenicRegion	0	5.76	0.00	10.62	3.40	6.88	3.57	4.88
53	IG21_AR16	ActiveIntergenicRegion	0	4.37	0.00	6.62	2.49	10.40	2.45	4.36
54	IG21_AR17	ActiveIntergenicRegion	0	6.71	0.27	9.93	2.19	5.94	0.81	4.87