Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NOTCH4	Gene	0	1.45	1.51	170.95	177.22	1.93	2.88	0.83
2	375023	Transcript	0	0.43	0.24	164.14	171.97	0.65	1.42	0.89
3	ER1a	ExonRegion	0	0.00	0.00	71.70	113.64	0.19	0.44	0.40
4	E1a_E2a	KnownJunction	0	0.00	0.00	116.62	79.84	0.00	0.00	0.82
5	E1a_E3a	NovelJunction	0	0.00	0.00	38.40	80.76	0.00	0.00	0.00
6	ER2a	ExonRegion	0	0.41	0.00	141.42	77.51	0.00	0.00	0.21
7	E2a_E3a	KnownJunction	0	1.03	0.00	112.94	87.56	0.00	0.00	0.76
8	ER3a	ExonRegion	0	0.28	0.00	124.65	175.38	0.14	1.40	0.56
9	E3a_E4a	KnownJunction	0	0.00	0.00	137.80	212.07	0.00	1.66	1.68
10	ER4a	ExonRegion	0	0.00	0.00	151.94	172.93	0.35	0.69	1.42
11	E4a_E5a	KnownJunction	0	0.00	0.00	139.68	154.93	0.00	0.00	1.55
12	ER5a	ExonRegion	0	0.00	0.00	176.87	195.72	0.67	0.76	0.65
13	E5a_E6a	KnownJunction	0	0.00	0.00	163.61	193.48	0.00	0.00	0.89
14	ER6a	ExonRegion	0	0.00	0.00	167.80	188.77	0.35	2.34	0.52
15	E6a_E7a	KnownJunction	0	0.00	0.00	155.52	232.36	0.00	0.00	1.62
16	ER7a	ExonRegion	0	0.00	0.00	187.30	236.87	0.26	2.99	1.02
17	E7a_E8a	KnownJunction	0	0.00	0.00	172.23	235.61	0.00	0.00	0.00
18	ER8a	ExonRegion	0	0.32	0.00	153.54	235.27	0.42	2.40	1.49
19	E8a_E9a	KnownJunction	0	0.60	0.00	152.28	218.08	0.00	3.99	2.15
20	ER9a	ExonRegion	0	0.59	0.00	189.77	245.18	1.63	3.22	2.95
21	E9a_E10a	KnownJunction	0	0.80	0.00	234.83	249.73	2.01	0.00	1.50
22	ER10a	ExonRegion	0	0.23	0.00	218.32	252.83	0.55	2.24	2.46
23	E10a_E11a	KnownJunction	0	0.00	0.00	187.91	215.29	0.00	3.64	3.04
24	E10a_E12a	NovelJunction	0	0.00	0.00	25.68	22.76	0.00	0.00	0.00
25	E10a_E18a	NovelJunction	0	0.00	0.00	2.82	11.65	0.00	0.00	0.00
26	ER11a	ExonRegion	0	0.00	0.75	239.26	214.23	1.16	0.98	2.35
27	E11_Da	NovelBoundary	0	0.00	0.00	97.39	39.28	0.00	1.55	0.00
28	E11a_E12a	KnownJunction	0	0.00	0.00	165.96	150.57	3.87	0.00	0.89
29	I11	Intron	0	0.14	0.00	54.80	11.90	0.30	0.00	0.00
30	I11_AR1	ActiveIntronRegion	0	0.00	0.00	43.51	8.85	0.00	0.00	0.00
31	I11_SR1	SilentIntronRegion	0	0.28	0.00	66.24	14.97	0.60	0.00	0.00
32	ER12a	ExonRegion	0	0.00	0.00	213.13	211.96	0.78	0.58	1.41
33	E12a_E13a	KnownJunction	0	0.00	0.00	195.59	217.49	1.18	0.00	1.78
34	ER13a	ExonRegion	0	0.39	0.00	195.90	221.50	0.71	1.09	1.67
35	E13a_E14a	KnownJunction	0	0.00	0.00	186.83	212.26	0.00	1.42	1.58
36	E13a_E18a	NovelJunction	0	0.00	0.00	3.28	14.55	0.00	0.00	0.00
37	ER14a	ExonRegion	0	0.29	0.60	147.83	186.53	0.00	0.72	1.41
38	E14a_E15a	KnownJunction	0	0.82	0.00	194.00	119.61	0.00	1.05	0.00
39	E14a_E18a	NovelJunction	0	0.00	0.00	9.24	32.92	0.00	0.00	0.00
40	ER15a	ExonRegion	0	0.12	0.00	213.27	132.33	0.68	0.87	2.09
41	E15a_E16a	KnownJunction	0	0.00	0.00	171.40	96.66	0.00	0.00	0.64
42	E15a_E17a	NovelJunction	0	0.00	0.00	16.53	44.48	0.00	0.00	0.00
43	ER16a	ExonRegion	0	0.00	0.00	163.10	101.27	0.91	0.00	0.30
44	E16a_E17a	KnownJunction	0	0.00	0.00	214.46	95.58	0.00	0.00	0.76
45	ER17a	ExonRegion	0	0.00	0.00	213.41	129.55	0.28	0.00	0.89
46	E17a_E18a	KnownJunction	0	0.00	0.00	225.10	153.66	0.00	0.00	0.00
47	ER18a	ExonRegion	0	0.00	0.99	272.80	208.13	0.45	2.01	1.07
48	E18a_E19a	KnownJunction	0	0.00	0.00	264.41	215.05	0.00	0.00	1.61
49	ER19a	ExonRegion	0	0.00	2.18	257.80	258.96	0.48	3.68	1.36
50	E19a_E20a	KnownJunction	0	0.00	0.00	220.69	258.12	0.00	0.00	1.42
51	E20_Aa	NovelBoundary	0	1.03	0.00	52.80	4.47	0.00	1.15	0.00
52	ER20a	ExonRegion	0	0.00	0.00	224.92	218.25	0.00	0.60	0.61
53	E20a_E21a	KnownJunction	0	0.00	0.00	166.83	190.80	0.00	1.39	0.00
54	E20a_E22a	NovelJunction	0	0.00	0.00	12.26	8.48	0.00	0.00	0.00
55	ER21a	ExonRegion	0	0.22	0.70	112.35	131.54	0.16	0.94	0.00
56	E21a_E22a	KnownJunction	0	0.00	0.00	120.08	155.07	0.00	0.00	0.00
57	E21a_E23a	NovelJunction	0	0.00	0.00	6.35	14.74	0.00	0.00	0.00
58	ER22a	ExonRegion	0	0.29	0.96	167.95	152.75	0.21	2.22	0.40
59	E22a_E23a	KnownJunction	0	0.88	0.00	166.44	158.37	0.00	4.10	0.00
60	ER23a	ExonRegion	0	0.24	0.52	166.87	161.12	0.00	2.00	0.65
61	E23a_E24a	KnownJunction	0	0.00	0.00	90.94	143.42	1.15	0.00	0.72
62	E23a_E25a	NovelJunction	0	0.00	0.00	18.61	12.11	0.00	0.00	0.00
63	ER24a	ExonRegion	0	0.38	0.00	97.65	135.22	0.19	0.48	0.43
64	E24a_E25a	KnownJunction	0	1.03	0.00	98.15	128.36	0.00	4.80	0.00
65	ER25a	ExonRegion	0	0.40	0.00	80.68	100.94	0.00	2.12	0.58
66	E25a_E26a	KnownJunction	0	0.00	0.00	53.93	33.62	0.00	0.00	0.00
67	ER26a	ExonRegion	0	0.88	0.00	135.50	152.62	0.71	2.15	0.00
68	E26a_E27a	KnownJunction	0	1.72	0.00	223.33	190.56	1.18	6.27	0.00
69	ER27a	ExonRegion	0	0.50	0.31	155.07	160.36	0.88	1.71	0.40
70	E27a_E28a	KnownJunction	0	0.00	0.00	106.81	160.65	2.21	2.97	0.76
71	ER28a	ExonRegion	0	0.58	0.01	94.93	166.78	1.44	3.08	0.25
72	E28a_E29a	KnownJunction	0	1.03	0.00	139.87	183.52	0.88	1.66	0.00
73	ER29a	ExonRegion	0	4.12	0.89	88.39	156.56	1.91	0.41	0.00
74	E29a_E30a	KnownJunction	0	1.00	0.00	73.42	120.12	2.07	0.00	0.00
75	ER30a	ExonRegion	0	6.31	6.33	208.54	189.20	8.04	8.61	0.79