Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TAP2	Gene	0	135.66	181.41	203.87	320.43	46.19	55.03	97.19
2	374897	Transcript	0	140.35	144.83	187.33	255.14	47.56	38.41	79.95
3	374899	Transcript	0	4.17	9.82	3.70	11.54	0.25	2.19	2.29
4	ER1a	ExonRegion	1	50.53	52.37	30.22	27.52	20.67	10.93	17.63
5	E1a_E2a	KnownJunction	1	31.76	56.09	15.38	29.85	1.06	10.02	12.91
6	ER2a	ExonRegion	0	102.36	251.90	149.40	354.82	37.37	61.64	93.06
7	E2_Da	NovelBoundary	1	88.99	6.33	98.31	5.82	0.00	0.00	0.67
8	E2a_E3a	KnownJunction	0	285.63	482.58	375.08	595.22	57.56	127.38	190.68
9	ER3a	ExonRegion	0	299.12	475.97	422.63	636.24	94.89	127.79	226.42
10	E3a_E4a	KnownJunction	0	189.11	448.56	294.07	555.88	51.45	101.62	180.06
11	ER4a	ExonRegion	0	286.35	408.07	377.14	672.70	95.06	96.27	207.14
12	E4a_E5a	KnownJunction	0	357.01	378.47	512.89	711.74	109.13	72.52	247.63
13	E4a_E6a	NovelJunction	0	0.68	13.58	0.00	3.17	0.00	1.61	0.80
14	ER5a	ExonRegion	0	218.87	437.86	356.61	748.75	87.73	86.76	213.67
15	E5a_E6a	KnownJunction	0	138.59	274.01	224.00	540.01	84.35	69.63	158.53
16	I5	Intron	0	30.96	31.04	39.68	26.53	8.29	5.15	6.43
17	I5_SR1	SilentIntronRegion	0	29.79	34.31	42.67	29.63	8.76	5.13	7.45
18	I5_AR1	ActiveIntronRegion	1	34.15	23.39	32.81	19.23	7.23	5.26	4.03
19	ER6a	ExonRegion	0	180.21	322.71	251.74	569.58	81.32	73.73	179.55
20	E6a_E7a	KnownJunction	0	212.46	334.57	250.58	601.61	53.60	55.93	172.98
21	ER7a	ExonRegion	0	203.62	342.85	287.40	570.35	71.38	65.92	197.10
22	E7a_E8a	KnownJunction	0	179.60	335.35	247.72	547.67	64.18	64.88	185.42
23	E7a_E9a	NovelJunction	0	11.27	3.15	9.92	9.21	15.51	0.00	8.03
24	ER8a	ExonRegion	0	174.30	319.22	264.31	531.21	62.47	88.98	186.43
25	E8a_E9a	KnownJunction	0	157.34	261.53	236.39	492.81	54.64	100.31	174.57
26	ER9a	ExonRegion	0	162.56	253.04	240.65	479.11	63.09	89.74	176.12
27	E9_Da	NovelBoundary	1	71.73	2.76	110.44	1.00	0.85	0.00	4.79
28	E9a_E10a	KnownJunction	0	215.10	249.87	284.45	499.18	66.25	95.25	192.34
29	ER10a	ExonRegion	0	190.70	244.25	241.17	474.39	62.95	73.64	173.89
30	E10a_E11a	KnownJunction	0	277.32	227.25	307.17	430.10	57.22	75.36	193.67
31	ER11a	ExonRegion	0	156.68	173.30	178.11	350.25	53.89	52.23	103.69
32	E11a_E12a	KnownJunction	0	147.14	150.27	164.38	240.89	51.94	25.65	81.79
33	E11a_E13a	KnownJunction	0	1.72	3.02	0.00	3.01	0.00	0.00	1.22
34	ER12a	ExonRegion	0	133.56	139.38	210.28	269.40	43.17	51.18	78.10
35	ER13a	ExonRegion	0	6.62	16.63	7.41	20.07	0.51	4.38	3.37
36	IG19	Intergenic	0	4.75	13.73	5.97	12.17	0.43	3.76	4.15
37	IG19_SR3	SilentIntergenicRegion	0	5.92	15.89	6.69	13.59	0.31	4.13	4.77
38	IG19_AR5	ActiveIntergenicRegion	0	3.29	15.41	3.88	15.60	0.39	4.25	3.71
39	IG19_SR2	SilentIntergenicRegion	0	4.75	18.22	5.18	17.16	0.49	5.25	4.68
40	IG19_AR4	ActiveIntergenicRegion	0	4.97	10.96	8.27	11.99	0.54	5.64	5.66
41	IG19_AR3	ActiveIntergenicRegion	0	8.00	17.72	7.90	17.15	1.28	5.41	7.20
42	IG19_AR2	ActiveIntergenicRegion	0	8.54	20.22	9.64	19.95	2.05	6.78	6.43
43	IG19_SR1	SilentIntergenicRegion	0	3.96	10.86	5.63	8.65	0.50	2.56	3.23