Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HLA-DMA	Gene	0	281.22	37.77	12.56	4.14	62.42	8.46	7.14
2	395303	Transcript	0	28.54	5.42	0.62	0.62	17.49	2.36	1.02
3	374843	Transcript	0	0	0	0	0	0	0	0
4	395305	Transcript	0	0	0	0	0	0	0	0
5	374841	Transcript	0	0.77	0.00	0.00	0.00	0.00	0.00	0.00
6	341486	Transcript	0	4.10	0.00	0.54	0.00	1.61	0.00	0.00
7	ER1a	ExonRegion	0	26.38	5.41	1.23	1.25	28.32	1.15	1.39
8	E1_Ab	KnownBoundary	0	4.46	1.52	0.00	1.68	26.58	1.42	0.89
9	E1_Ac	KnownBoundary	0	55.21	9.51	2.57	0.00	41.13	3.24	4.36
10	ER1b	ExonRegion	0	84.53	17.41	5.33	1.25	62.84	3.68	3.46
11	E1_Ad	KnownBoundary	0	176.95	26.03	10.23	0.00	23.97	1.66	2.32
12	ER1c	ExonRegion	0	133.62	26.19	8.45	1.25	57.01	3.68	4.32
13	ER1d	ExonRegion	0	143.23	36.88	6.85	0.01	18.48	8.55	3.53
14	E1a_E3a	KnownJunction	0	15.50	26.98	0.56	0.00	3.18	5.20	1.89
15	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.97	1.37	0.00
16	ER2a	ExonRegion	0	8.20	0.00	1.09	0.00	3.22	0.00	0.00
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3a	ExonRegion	0	393.39	41.66	15.51	3.56	82.91	16.14	8.69
19	E3_Da	NovelBoundary	0	93.90	8.98	6.15	4.01	9.98	1.05	0.00
20	E3a_E4a	KnownJunction	0	612.85	46.37	16.04	1.54	90.04	10.21	10.82
21	E3a_E4b	KnownJunction	0	30.69	5.44	0.00	0.00	6.66	3.56	0.66
22	I3	Intron	0	125.79	7.97	9.09	3.28	21.63	1.45	2.65
23	I3_AR1	ActiveIntronRegion	0	126.19	7.99	9.12	3.29	21.69	1.45	2.66
24	E4_Aa	NovelBoundary	1	115.81	9.80	9.79	1.22	10.33	0.00	0.89
25	ER4a	ExonRegion	0	627.21	56.04	21.37	9.36	105.38	11.33	13.43
26	E4_Ab	KnownBoundary	0	626.02	66.36	24.80	8.40	76.97	10.29	11.94
27	ER4b	ExonRegion	0	476.31	64.37	22.85	9.60	110.34	10.29	10.20
28	E4a_E5a	KnownJunction	1	299.52	44.98	10.63	7.96	77.76	1.50	6.52
29	ER5a	ExonRegion	0	220.12	41.85	12.47	6.44	78.54	4.04	7.93
30	E5a_E6a	KnownJunction	1	243.64	43.09	19.93	2.79	69.09	2.57	10.98
31	ER5b	ExonRegion	0	0.77	0.00	0.00	0.00	0.00	0.00	0.00
32	ER6a	ExonRegion	0	205.77	35.12	12.69	2.72	43.18	4.01	11.38
33	E6_Da	KnownBoundary	0	128.76	30.55	3.52	1.68	31.84	7.69	8.74
34	ER6b	ExonRegion	0	69.11	20.87	4.39	0.78	11.14	4.05	2.91
35	ER6c	ExonRegion	0	0.90	0.20	0.11	0.00	1.08	0.61	0.00