Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CAPN11	Gene	0	1.11	0.87	0.30	1.55	5.02	5.24	0.15
2	259755	Transcript	0	0.19	0.00	0.00	0.31	0.00	0.00	0.00
3	398776	Transcript	0	0.00	0.00	0.00	0.40	1.97	0.14	0.00
4	IG21	Intergenic	0	6.06	1.41	2.20	5.16	0.06	10.30	0.25
5	IG21_SR1	SilentIntergenicRegion	0	6.07	1.41	2.20	5.16	0.06	10.31	0.25
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1_Da	NovelBoundary	0	2.00	1.52	2.41	0.00	0.00	10.88	0.00
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	0.01	0.00	0.00	0.64	2.65	2.50	0.00
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	1.68	4.33	6.46	0.00
11	E3_Aa	NovelBoundary	0	4.67	2.60	0.00	5.93	0.00	9.81	0.00
12	ER3a	ExonRegion	0	2.01	1.17	0.21	2.07	1.79	10.18	0.00
13	E3a_E4a	KnownJunction	0	0.00	1.21	0.00	0.00	1.18	4.31	0.00
14	ER4a	ExonRegion	0	1.80	1.06	0.00	0.04	1.15	3.45	0.00
15	E4_Da	NovelBoundary	0	5.27	1.52	0.00	0.00	0.00	9.09	0.00
16	E4a_E5a	KnownJunction	0	0.60	0.00	0.00	0.00	1.18	6.22	0.00
17	ER5a	ExonRegion	0	0.67	0.80	0.00	2.39	2.49	4.48	0.00
18	E5a_E6a	KnownJunction	0	0.87	0.00	0.00	0.00	3.30	1.15	0.00
19	ER6a	ExonRegion	0	1.03	0.67	0.00	1.41	3.41	5.95	0.00
20	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	3.11	2.49	0.00
21	ER7a	ExonRegion	0	3.31	0.00	0.30	0.00	4.27	5.72	0.00
22	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	5.26	0.00	0.00
23	ER8a	ExonRegion	0	0.00	1.10	0.41	0.00	6.80	9.05	0.36
24	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	9.38	6.65	0.89
25	ER9a	ExonRegion	0	0.68	2.71	0.55	2.46	6.37	5.96	0.24
26	E9a_E10a	KnownJunction	0	0.00	1.63	1.61	4.09	4.13	2.60	0.00
27	E10_Aa	NovelBoundary	0	0.97	1.44	0.00	1.68	0.00	9.00	0.00
28	ER10a	ExonRegion	0	0.37	2.24	0.49	2.49	6.00	7.68	0.00
29	E10_Da	NovelBoundary	0	0.00	0.00	0.00	1.63	0.00	10.69	0.00
30	E10a_E11a	KnownJunction	0	1.02	2.84	0.00	3.25	7.63	2.04	0.00
31	ER11a	ExonRegion	0	1.63	0.92	0.00	2.82	6.79	9.24	0.32
32	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	4.26	0.00	0.00
33	ER12a	ExonRegion	0	1.49	2.06	0.00	2.09	5.40	0.53	0.00
34	E12a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	2.21	0.00	0.00
35	E12b_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER12b	ExonRegion	0	0.77	0.00	0.00	1.25	0.00	0.00	0.00
37	E13a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	1.19	0.99	0.00	0.00
40	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	2.70	0.41	0.00
41	E15_Aa	NovelBoundary	0	0.00	2.23	0.00	1.60	0.00	9.27	0.00
42	ER15a	ExonRegion	0	0.99	0.87	0.81	2.68	4.97	6.09	0.00
43	E15a_E16a	KnownJunction	0	0.00	0.00	0.85	0.00	8.90	0.00	0.00
44	E15a_E19a	NovelJunction	0	0.00	0.00	0.00	4.36	0.00	10.51	0.00
45	ER16a	ExonRegion	0	0.00	1.06	1.15	0.41	7.73	0.00	0.00
46	E16a_E17a	KnownJunction	0	0.00	1.63	0.85	1.03	5.14	0.00	0.00
47	ER17a	ExonRegion	0	0.00	0.75	0.57	2.53	7.08	0.50	0.00
48	E17a_E18a	KnownJunction	0	0.00	0.00	0.85	0.00	5.46	1.55	0.00
49	ER18a	ExonRegion	0	0.00	0.00	0.44	1.33	7.16	1.01	0.00
50	E18a_E19a	KnownJunction	0	0.00	0.00	1.44	1.27	12.47	0.00	0.00
51	ER19a	ExonRegion	0	0.00	0.93	1.69	0.79	11.75	1.83	0.00
52	E19a_E20a	KnownJunction	0	0.00	1.50	0.78	1.38	6.78	6.62	0.00
53	ER20a	ExonRegion	0	0.00	0.46	0.73	2.51	11.68	6.29	0.00
54	E20_Da	NovelBoundary	0	2.79	6.04	0.00	3.93	0.90	9.57	0.00
55	E20a_E21a	KnownJunction	0	0.00	0.00	0.80	1.16	19.57	2.97	0.00
56	ER21a	ExonRegion	0	0.50	0.00	0.21	1.01	12.47	4.67	0.00
57	E21_Da	NovelBoundary	0	1.79	0.00	0.68	5.63	4.03	9.27	0.00
58	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	8.51	4.56	0.00
59	ER22a	ExonRegion	0	1.17	0.79	0.86	1.59	8.96	12.68	0.00
60	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	8.30	1.15	0.00
61	ER23a	ExonRegion	0	0.00	1.01	0.00	0.00	9.09	0.66	0.00
62	E23a_E24a	KnownJunction	0	0.00	1.37	0.00	0.00	7.84	2.20	0.00
63	ER24a	ExonRegion	0	1.29	0.61	0.10	1.33	3.04	3.68	0.61
64	IG22_AR4	ActiveIntergenicRegion	0	0.00	0.28	0.26	1.84	33.67	3.75	0.15