Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RUNX2	Gene	0	5.92	7.84	5.81	2.01	1.31	9.71	7.13
2	371432	Transcript	0	3.00	5.46	1.65	3.55	0.00	7.83	0.82
3	359524	Transcript	0	0	0	0	0	0	0	0
4	371438	Transcript	0	0.95	0.00	0.42	0.47	0.88	0.04	0.43
5	371436	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	352853	Transcript	0	0.56	5.26	1.11	0.68	0.30	4.59	1.17
7	ER1a	ExonRegion	0	0.00	0.00	0.38	0.00	0.60	7.08	0.00
8	E1_Ab	KnownBoundary	1	0.00	1.29	0.86	0.00	1.01	16.94	0.00
9	ER1b	ExonRegion	1	0.18	1.01	0.42	0.00	1.30	10.66	0.00
10	E1_Da	KnownBoundary	0	0.87	0.00	0.60	0.00	1.04	1.02	0.00
11	E1a_E1c	KnownJunction	1	0.00	0.00	0.00	0.00	0.00	8.76	0.00
12	ER1c	ExonRegion	0	0.95	0.00	0.42	0.47	0.88	0.04	0.43
13	E1_Ac	KnownBoundary	0	0.77	0.00	0.69	0.00	0.00	0.00	0.80
14	ER1d	ExonRegion	0	1.08	1.51	2.36	0.00	0.26	7.93	0.50
15	E1_Ad	KnownBoundary	0	1.03	3.05	4.81	0.00	1.18	6.19	0.79
16	ER1e	ExonRegion	1	0.58	1.51	1.96	0.00	0.43	8.97	0.60
17	E1b_E2b	KnownJunction	1	0.00	0.00	0.00	0.00	0.00	10.72	0.00
18	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER2a	ExonRegion	0	0.56	5.26	1.11	0.68	0.30	4.59	1.17
20	E2_Ab	KnownBoundary	0	0.00	4.60	0.00	0.00	0.00	1.66	0.89
21	ER2b	ExonRegion	0	0.63	2.45	0.61	0.54	0.32	2.64	1.19
22	E2a_E3a	KnownJunction	0	0.78	8.01	3.61	1.03	1.01	8.95	3.30
23	ER3a	ExonRegion	0	3.28	21.14	6.12	3.18	1.25	15.49	9.87
24	E3a_E4a	KnownJunction	0	6.24	19.05	13.41	1.57	1.18	28.30	14.19
25	ER4a	ExonRegion	0	6.26	26.70	10.27	1.48	1.85	15.27	13.90
26	E4a_E5a	KnownJunction	0	4.61	11.38	9.34	0.00	1.08	9.94	9.44
27	E4a_E6a	NovelJunction	0	1.02	2.44	2.89	1.60	0.00	1.61	8.57
28	ER5a	ExonRegion	0	5.31	14.83	8.78	2.18	0.87	18.63	8.22
29	E5_Da	KnownBoundary	0	6.29	17.81	9.30	3.33	0.92	16.99	8.56
30	ER5b	ExonRegion	0	2.41	10.43	3.99	2.29	1.84	9.47	8.33
31	E5b_E6a	KnownJunction	0	0.95	5.52	3.25	5.55	0.00	9.70	4.87
32	ER6a	ExonRegion	0	6.87	10.78	5.07	4.55	1.02	9.76	10.04
33	E6a_E7a	KnownJunction	0	2.02	7.59	1.97	0.00	0.00	3.16	11.51
34	E6a_E8a	KnownJunction	0	3.00	5.46	1.65	3.55	0.00	7.83	0.82
35	ER7a	ExonRegion	0	1.41	5.19	2.63	0.59	0.00	9.46	9.82
36	E7a_E8a	KnownJunction	1	1.03	2.60	0.68	2.52	0.00	17.88	3.93
37	ER8a	ExonRegion	0	7.68	8.14	7.19	2.35	1.57	10.81	8.51
38	ER8b	ExonRegion	0	0.00	0.00	0.68	0.00	0.00	1.23	0.34
39	IG29_AR1	ActiveIntergenicRegion	0	0.22	0.00	0.07	0.36	0.00	11.44	0.19
40	IG29_SR2	SilentIntergenicRegion	0	0.00	0.00	0.11	0.00	0.00	8.60	0.00
41	IG29_AR3	ActiveIntergenicRegion	0	0.22	0.00	0.11	0.00	0.02	9.79	0.16