Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GNL1	Gene	0	77.97	224.88	132.25	367.02	97.53	310.46	90.48
2	376621	Transcript	0	106.60	309.12	198.59	473.46	156.10	398.38	146.04
3	376602	Transcript	0	8.84	34.62	20.21	53.00	22.57	42.36	14.00
4	ER1a	ExonRegion	0	16.98	40.05	24.82	65.73	15.93	53.54	14.83
5	E1a_E2a	KnownJunction	0	48.98	294.29	90.33	371.39	58.53	240.18	94.66
6	E1a_E3a	NovelJunction	1	1.92	1.13	2.79	15.85	0.00	12.81	1.49
7	ER2a	ExonRegion	0	80.52	331.23	155.25	540.21	115.44	397.24	137.53
8	E2a_E3a	KnownJunction	0	88.57	341.40	177.59	547.70	244.84	473.07	181.12
9	ER3a	ExonRegion	0	121.45	361.62	223.78	542.03	176.20	466.18	169.76
10	E3a_E4a	KnownJunction	0	150.93	350.78	270.38	570.89	212.87	498.80	210.96
11	E3a_E6a	NovelJunction	0	0.00	5.02	0.00	3.14	0.00	12.62	0.00
12	ER4a	ExonRegion	0	176.21	427.59	321.52	658.28	205.28	590.89	216.70
13	E4a_E5a	KnownJunction	0	201.11	411.57	365.85	607.71	249.11	555.26	201.07
14	E5_Ac	NovelBoundary	0	117.26	351.64	205.28	522.64	131.47	508.58	167.22
15	ER5a	ExonRegion	0	155.74	419.13	282.24	594.80	211.10	559.05	190.68
16	ER5b	ExonRegion	0	143.92	424.25	268.63	608.25	201.02	568.42	194.57
17	ER5c	ExonRegion	0	140.01	434.92	278.40	674.11	180.60	593.38	205.08
18	ER5d	ExonRegion	0	143.11	433.90	282.73	685.63	205.90	620.11	211.01
19	E5b_E6a	KnownJunction	0	151.88	435.95	301.17	695.32	182.16	614.20	212.43
20	I5_SR2	SilentIntronRegion	1	17.51	12.22	27.80	12.48	0.97	10.32	2.88
21	I5_AR1	ActiveIntronRegion	1	20.14	14.75	22.21	12.22	1.60	8.04	2.17
22	ER6a	ExonRegion	0	141.24	336.28	276.62	502.99	173.10	423.88	151.47
23	E6a_E7a	KnownJunction	0	75.31	244.88	138.27	386.02	90.46	298.15	78.69
24	E6a_E8b	NovelJunction	1	0.00	2.78	2.05	20.18	1.18	30.50	0.73
25	ER7a	ExonRegion	0	69.19	250.91	144.87	380.71	108.84	297.60	97.48
26	E7a_E8a	KnownJunction	0	0.00	0.00	2.14	0.00	0.00	1.66	0.00
27	E7a_E8b	KnownJunction	0	75.15	273.01	160.78	437.41	191.71	322.40	120.53
28	ER8a	ExonRegion	0	17.67	69.25	38.27	105.99	45.15	83.06	28.00
29	ER8b	ExonRegion	0	88.58	336.11	183.38	515.82	158.27	434.83	132.37
30	E8a_E9a	KnownJunction	0	95.92	327.50	198.14	523.45	139.31	490.38	119.75
31	I8	Intron	0	27.30	15.94	28.48	14.36	10.42	8.86	8.66
32	I8_SR1	SilentIntronRegion	0	29.73	16.95	32.80	14.85	10.63	8.38	10.11
33	I8_AR3	ActiveIntronRegion	0	26.51	13.75	16.79	8.72	13.90	8.66	4.05
34	E9_Aa	NovelBoundary	1	45.71	19.86	44.82	35.57	16.37	24.98	10.66
35	ER9a	ExonRegion	0	162.38	413.31	278.55	687.59	199.79	640.12	175.20
36	E9a_E10a	KnownJunction	0	159.24	389.58	225.07	752.21	257.04	631.80	128.95
37	ER10a	ExonRegion	0	135.41	368.82	194.72	648.96	174.27	568.89	142.12
38	E10_Da	NovelBoundary	1	41.99	36.25	37.82	24.84	6.94	27.63	3.75
39	E10a_E11a	KnownJunction	0	119.83	342.26	166.65	649.56	140.28	585.39	130.76
40	I10	Intron	1	24.36	17.41	21.07	15.45	2.40	14.22	2.21
41	I10_AR1	ActiveIntronRegion	1	24.53	17.53	21.20	15.55	2.42	14.32	2.22
42	E11_Aa	NovelBoundary	1	26.79	33.52	20.82	25.47	0.00	18.47	1.46
43	ER11a	ExonRegion	0	101.11	390.58	132.89	650.42	118.89	565.29	127.60
44	E11a_E12a	KnownJunction	0	135.67	366.01	153.33	611.20	95.44	611.38	105.71
45	ER12a	ExonRegion	0	82.99	234.84	103.35	441.74	79.90	349.07	63.96
46	E12_Da	KnownBoundary	1	80.81	77.16	76.78	190.37	19.53	96.83	26.89
47	ER12b	ExonRegion	1	23.57	23.90	32.12	71.27	11.57	30.62	9.58
48	IG18	Intergenic	0	13.30	11.25	14.25	23.97	2.69	18.99	4.42
49	IG18_AR8	ActiveIntergenicRegion	0	69.79	52.83	75.37	120.50	14.24	73.11	22.18
50	IG18_AR4	ActiveIntergenicRegion	0	41.13	54.60	42.65	111.79	8.84	102.71	17.80
51	IG18_SR3	SilentIntergenicRegion	0	2.90	4.00	2.57	4.75	0.43	9.14	1.69
52	IG18_AR1	ActiveIntergenicRegion	0	3.63	4.29	4.74	2.22	0.57	11.74	1.20