Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DOM3Z	Gene	0	51.54	73.38	34.91	71.48	32.38	54.84	48.21
2	337523	Transcript	0	13.41	23.99	10.11	29.02	8.20	18.20	21.47
3	375349	Transcript	1	0.00	11.87	2.40	12.38	5.56	12.06	12.80
4	375356	Transcript	0	32.10	46.45	21.63	32.98	11.62	27.75	23.71
5	ER1a	ExonRegion	0	0.33	0.06	0.63	0.82	0.92	0.04	0.92
6	E1_Ab	KnownBoundary	1	31.34	8.59	11.73	21.84	3.78	11.10	5.47
7	ER1b	ExonRegion	0	17.98	22.18	11.34	24.06	15.31	24.74	17.92
8	E1_Ac	KnownBoundary	0	47.92	67.91	25.79	60.68	13.32	37.20	33.16
9	ER1c	ExonRegion	0	37.38	70.72	26.26	64.28	22.27	40.63	47.40
10	E1_Da	KnownBoundary	1	28.76	40.06	24.34	16.04	10.28	11.79	17.43
11	E1a_E1d	KnownJunction	1	0.00	11.87	2.40	12.38	5.56	12.06	12.80
12	E1a_E1e	KnownJunction	0	26.49	47.92	19.59	57.22	15.49	36.37	42.02
13	ER1d	ExonRegion	0	32.10	46.45	21.63	32.98	11.62	27.75	23.71
14	E1_Ad	KnownBoundary	0	32.13	37.33	23.48	36.14	16.81	36.39	27.12
15	ER1e	ExonRegion	0	38.70	54.23	29.67	58.32	17.78	54.84	46.42
16	E1_Ae	KnownBoundary	0	40.21	47.84	28.70	51.69	16.09	49.98	31.93
17	ER1f	ExonRegion	0	53.65	104.67	40.19	93.93	30.04	79.98	55.51
18	E1_Db	NovelBoundary	0	30.54	31.13	11.54	21.32	11.13	27.71	11.85
19	E1b_E2a	KnownJunction	0	29.21	48.68	15.56	51.69	7.17	39.42	26.36
20	E2_Aa	NovelBoundary	0	42.03	28.32	19.03	27.71	5.28	24.82	14.58
21	ER2a	ExonRegion	0	37.98	85.57	29.43	74.46	26.07	64.91	33.68
22	E2_Da	NovelBoundary	0	52.44	34.42	31.99	33.21	12.36	29.56	20.94
23	E2a_E3a	KnownJunction	0	30.73	46.87	19.74	42.21	26.79	27.60	23.06
24	E3_Aa	NovelBoundary	0	20.19	20.41	12.59	32.94	14.41	14.15	11.11
25	ER3a	ExonRegion	0	67.13	83.71	48.40	87.27	47.69	60.87	57.30
26	E3_Da	NovelBoundary	1	54.89	39.59	20.62	28.91	14.29	8.50	7.54
27	E3a_E4a	KnownJunction	0	53.21	67.75	41.60	95.88	64.57	47.92	61.18
28	I3	Intron	1	40.94	18.84	16.66	14.08	10.27	10.25	6.01
29	I3_AR1	ActiveIntronRegion	1	41.51	19.11	16.89	14.29	10.40	10.40	6.10
30	E4_Aa	NovelBoundary	1	84.10	57.90	38.79	40.69	15.45	37.28	17.28
31	ER4a	ExonRegion	0	97.91	102.28	68.31	111.93	72.43	70.13	92.99
32	E4_Da	NovelBoundary	1	77.06	57.17	39.12	58.22	15.01	41.83	22.67
33	E4a_E5a	KnownJunction	0	100.71	86.88	70.30	133.78	56.16	71.10	136.71
34	I4	Intron	0	43.72	52.80	19.76	44.67	14.69	25.28	12.78
35	I4_AR1	ActiveIntronRegion	0	44.32	53.51	20.05	45.24	14.88	25.65	12.94
36	E5_Aa	NovelBoundary	1	92.85	60.90	33.35	78.81	12.91	46.55	27.80
37	ER5a	ExonRegion	0	97.46	128.20	63.57	138.41	59.72	92.29	105.22
38	E5_Da	NovelBoundary	1	60.15	26.72	17.60	12.06	7.58	8.12	9.50
39	E5a_E6a	KnownJunction	0	77.31	96.34	50.58	90.54	39.14	64.51	44.86
40	E6_Aa	NovelBoundary	1	55.13	24.30	23.27	13.14	4.52	12.41	4.76
41	ER6a	ExonRegion	0	75.77	64.90	37.27	76.02	45.69	51.59	62.81
42	ER6b	ExonRegion	0	5.38	1.21	0.68	0.00	0.00	3.68	0.00