Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 WRNIP1 Gene 0 75.53 100.29 122.73 115.12 76.07 82.07 105.97 2 380773 Transcript 0 0 0 0 0 0 0 0 3 380771 Transcript 1 16.29 13.56 37.52 12.06 8.51 2.14 4.11 4 380769 Transcript 0 1.40 1.53 2.47 0.76 1.14 0.39 2.81 5 380764 Transcript 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 4.33 37.82 6.14 40.23 3.96 21.11 15.09 7 E1_Ab KnownBoundary 0 3.05 48.08 4.80 54.29 0.00 27.63 12.25 8 ER1b ExonRegion 0 47.67 112.39 77.74 102.84 42.17 71.49 65.47 9 E1a_E2a KnownJunction 0 157.42 184.16 236.42 198.36 127.53 131.32 195.42 10 E1a_E4a NovelJunction 0 1.75 14.16 8.65 16.42 1.11 14.71 6.86 11 ER2a ExonRegion 0 182.59 257.80 350.22 253.19 171.97 181.85 238.32 12 E2_Ab KnownBoundary 0 226.95 276.87 460.93 268.85 202.61 203.46 266.78 13 ER2b ExonRegion 0 272.22 314.80 463.95 324.14 253.44 221.65 305.69 14 E2a_E3a KnownJunction 0 207.01 259.82 391.59 302.23 205.68 251.17 321.28 15 E2a_E3b KnownJunction 1 16.29 13.56 37.52 12.06 8.51 2.14 4.11 16 E3_Aa NovelBoundary 0 25.17 3.49 11.63 2.44 4.89 0.00 11.36 17 ER3a ExonRegion 0 220.52 259.15 400.33 277.60 224.34 214.08 324.38 18 E3_Ab KnownBoundary 0 210.71 212.96 359.29 222.28 200.65 162.49 266.21 19 ER3b ExonRegion 0 156.17 200.28 266.76 216.32 194.62 135.61 234.12 20 E3a_E4a KnownJunction 0 63.54 75.77 133.57 118.28 65.15 53.06 120.34 21 I3 Intron 0 19.67 6.87 16.70 4.71 5.79 4.03 13.69 22 I3_AR2 ActiveIntronRegion 0 30.51 7.70 22.58 7.20 6.79 2.02 10.57 23 I3_AR3 ActiveIntronRegion 0 27.19 9.45 20.58 2.98 4.11 0.00 8.99 24 I3_AR4 ActiveIntronRegion 0 15.08 22.66 15.59 10.81 7.82 12.82 13.43 25 I3_SR4 SilentIntronRegion 0 17.34 5.49 14.54 4.31 4.11 2.73 10.60 26 I3_SR5 SilentIntronRegion 0 28.37 10.51 19.87 5.77 5.77 4.32 15.46 27 I3_SR6 SilentIntronRegion 0 23.94 8.99 20.43 5.47 9.16 5.86 20.16 28 E4_Aa NovelBoundary 0 21.11 16.45 12.69 8.10 13.85 13.29 25.08 29 ER4a ExonRegion 0 102.28 160.93 195.37 201.41 145.16 120.87 214.73 30 E4_Da NovelBoundary 1 26.67 52.81 26.83 32.70 12.79 16.32 26.74 31 E4a_E5a KnownJunction 0 84.65 90.43 162.63 136.62 128.54 66.17 182.27 32 I4 Intron 0 29.06 15.75 33.86 17.35 10.31 11.94 28.29 33 I4_AR1 ActiveIntronRegion 0 23.75 32.45 35.28 21.28 11.24 12.43 29.06 34 I4_SR1 SilentIntronRegion 0 36.39 14.25 55.52 14.53 7.84 7.61 28.41 35 I4_AR2 ActiveIntronRegion 0 29.99 14.61 36.97 16.90 11.69 12.62 31.09 36 I4_SR2 SilentIntronRegion 0 24.67 11.71 31.25 12.92 8.47 5.08 23.54 37 I4_AR3 ActiveIntronRegion 1 28.79 13.23 28.27 17.59 10.10 12.89 27.23 38 ER5a ExonRegion 0 77.58 135.31 135.65 167.52 127.17 97.58 197.60 39 E5a_E6a KnownJunction 0 96.50 167.72 154.88 193.70 109.82 125.45 282.67 40 I5 Intron 0 14.91 9.17 26.30 11.71 8.37 10.76 18.85 41 I5_AR1 ActiveIntronRegion 0 15.01 8.97 26.72 11.34 7.17 12.12 17.79 42 I5_SR1 SilentIntronRegion 1 20.12 14.80 35.69 17.32 18.66 9.45 28.08 43 E6_Aa NovelBoundary 0 15.79 20.83 27.30 23.05 6.45 15.41 32.37 44 ER6a ExonRegion 0 96.29 186.94 161.53 220.06 132.55 136.45 268.84 45 E6a_E7a KnownJunction 0 100.42 163.41 160.52 179.78 144.03 104.47 196.80 46 ER7a ExonRegion 0 160.37 149.49 232.81 196.47 133.73 165.25 170.01 47 E7_Da KnownBoundary 0 0.00 1.26 0.76 0.00 0.00 0.00 0.00 48 E7_Db KnownBoundary 0 0.00 0.00 3.22 0.00 0.97 0.00 2.46 49 ER7b ExonRegion 0 3.07 9.72 7.45 9.98 1.62 15.94 4.05 50 ER7c ExonRegion 0 1.40 1.53 2.47 0.76 1.14 0.39 2.81 51 IG28 Intergenic 0 10.34 12.88 4.98 1.61 2.89 3.25 18.16 52 IG28_AR4 ActiveIntergenicRegion 0 192.87 243.73 64.83 18.09 42.09 50.90 338.73