Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HFE	Gene	0	14.60	3.79	4.11	1.91	5.82	4.58	17.92
2	397022	Transcript	0	0	0	0	0	0	0	0
3	349999	Transcript	0	0.00	1.42	0.00	0.00	0.00	0.00	0.00
4	352392	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	317896	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	309234	Transcript	0	0	0	0	0	0	0	0
7	353147	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	317880	Transcript	0	0.00	0.04	0.00	0.00	0.00	0.00	0.02
9	357618	Transcript	0	0.00	0.00	0.00	0.00	0.05	0.00	0.04
10	345823	Transcript	0	1.96	0.53	0.97	0.00	1.99	0.80	2.86
11	336625	Transcript	0	6.74	2.43	1.32	0.50	1.39	0.99	4.24
12	ER1a	ExonRegion	0	3.01	1.68	2.63	1.20	1.23	2.98	5.52
13	E1a_E2a	KnownJunction	0	0.68	0.00	0.68	0.00	0.00	1.66	3.40
14	E1a_E3a	KnownJunction	0	0.00	1.42	0.00	0.00	0.00	0.00	0.00
15	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E2_Aa	NovelBoundary	1	16.22	5.25	0.00	5.77	0.00	4.26	3.21
18	ER2a	ExonRegion	0	16.00	2.63	3.86	3.28	4.22	8.22	18.80
19	E2_Da	KnownBoundary	0	10.71	1.52	4.07	0.00	3.46	4.02	15.18
20	E2a_E7c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2b	ExonRegion	0	8.11	5.25	2.95	0.00	3.84	5.69	19.41
22	E2b_E3a	KnownJunction	1	4.89	4.68	2.80	0.00	3.43	6.46	19.09
23	E2b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	Ix	Intron	0	11.12	4.42	3.28	4.06	3.95	4.34	1.21
25	Ix_AR1	ActiveIntronRegion	0	11.22	4.46	3.31	4.10	3.99	4.38	1.22
26	E3_Aa	NovelBoundary	1	22.18	5.88	4.40	4.23	0.00	8.52	2.97
27	ER3a	ExonRegion	0	18.53	10.34	5.68	2.20	7.39	5.62	24.45
28	E3_Da	KnownBoundary	0	29.54	10.01	7.47	3.28	6.66	9.35	30.14
29	E3a_E7d	KnownJunction	0	13.49	4.86	2.64	1.00	1.71	1.98	8.48
30	ER3b	ExonRegion	0	21.71	5.82	4.50	2.14	6.83	9.07	22.74
31	E3_Db	NovelBoundary	1	11.85	7.22	0.57	1.38	2.35	6.59	0.70
32	E3b_E4a	KnownJunction	1	9.38	1.05	0.89	1.44	9.38	4.37	34.27
33	ER4a	ExonRegion	0	16.27	5.40	0.68	1.25	9.47	4.35	38.50
34	ER4b	ExonRegion	0	14.99	4.76	1.20	1.25	6.24	6.97	28.98
35	E4_Db	KnownBoundary	0	20.96	4.68	3.33	3.17	7.26	5.49	36.20
36	ER4c	ExonRegion	0	12.72	2.54	3.04	1.34	8.96	4.20	32.10
37	E4c_E5a	KnownJunction	1	4.04	0.00	1.12	0.00	0.00	3.32	23.15
38	ER5a	ExonRegion	1	5.57	1.62	1.71	1.96	3.09	3.40	16.66
39	E5_Da	NovelBoundary	1	12.60	2.63	0.69	2.55	1.15	0.00	0.72
40	E5a_E6a	KnownJunction	0	11.02	0.00	1.60	1.57	4.20	0.00	18.92
41	E6_Aa	NovelBoundary	1	9.61	2.68	1.26	0.00	0.95	0.00	0.00
42	ER6a	ExonRegion	0	18.30	3.56	6.92	3.43	8.41	5.23	21.86
43	ER6b	ExonRegion	0	22.54	4.86	7.68	1.25	10.53	3.27	22.49
44	ER6c	ExonRegion	0	19.69	4.87	5.00	1.54	6.69	2.59	16.25
45	E6_Db	NovelBoundary	0	8378.62	5201.59	5337.20	4806.04	3705.26	4637.32	3536.44
46	Ix	Intron	0	9.88	1.03	2.83	0.35	5.64	2.41	8.90
47	Ix_AR1	ActiveIntronRegion	0	9.88	1.03	2.83	0.35	5.64	2.41	8.90
48	E7_Aa	NovelBoundary	0	1953.21	1290.64	1328.02	1147.88	1021.91	1007.40	1087.67
49	E7_Ab	NovelBoundary	1	484.91	173.52	182.96	164.58	360.41	128.96	127.74
50	ER7a	ExonRegion	0	0.00	0.04	0.00	0.00	0.00	0.00	0.02
51	ER7b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	ER7c	ExonRegion	0	0.00	0.00	0.00	0.00	0.05	0.00	0.04
53	ER7d	ExonRegion	0	1.67	0.00	0.00	0.00	1.48	0.00	1.98
54	ER7e	ExonRegion	0	3.91	1.06	1.94	0.00	3.97	1.59	5.71
55	E7_Ad	KnownBoundary	0	7.08	1.23	2.26	0.00	3.39	2.73	6.22
56	ER7f	ExonRegion	0	3.68	0.00	1.34	0.00	4.55	0.92	2.56
57	ER7g	ExonRegion	0	0.00	0.00	0.00	0.00	1.08	0.00	0.00