Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FBXO38	Gene	0	60.12	46.18	86.28	29.98	97.25	43.33	56.49
2	296701	Transcript	1	8.76	2.57	22.94	2.82	20.63	6.27	20.29
3	340253	Transcript	0	25.91	36.54	37.23	25.25	56.39	36.25	32.26
4	394370	Transcript	0	3.84	9.87	9.29	2.52	11.82	6.59	7.58
5	ER1a	ExonRegion	0	7.49	1.21	8.50	0.00	12.59	3.31	4.96
6	ER1b	ExonRegion	0	38.71	14.38	44.49	8.43	85.69	15.47	18.47
7	E1a_E2a	KnownJunction	1	81.11	30.66	100.00	17.23	198.88	24.68	33.52
8	ER2a	ExonRegion	0	64.41	46.34	99.07	26.87	72.58	35.43	34.06
9	E2a_E3a	KnownJunction	1	69.73	38.01	125.34	21.56	205.77	40.44	34.17
10	ER3a	ExonRegion	0	38.70	42.75	61.94	19.47	96.63	39.42	35.77
11	E3a_E4a	KnownJunction	0	47.03	31.37	77.11	26.71	45.30	40.55	31.03
12	ER4a	ExonRegion	0	56.52	42.80	77.13	27.31	61.70	45.03	40.65
13	E4a_E5a	KnownJunction	0	50.14	45.87	94.63	29.94	76.24	30.39	35.73
14	ER5a	ExonRegion	0	78.69	54.32	118.46	28.03	85.28	36.46	51.85
15	E5a_E6a	KnownJunction	0	98.24	52.41	125.98	29.34	86.15	24.20	48.61
16	ER6a	ExonRegion	0	99.43	63.01	145.05	46.95	104.27	48.53	61.31
17	E6a_E7a	KnownJunction	0	117.53	61.69	140.69	60.66	101.34	44.76	68.76
18	ER7a	ExonRegion	0	119.80	54.04	148.17	43.90	122.10	46.84	65.93
19	E7a_E8a	KnownJunction	0	102.53	50.94	133.36	36.36	129.33	38.43	58.33
20	ER8a	ExonRegion	1	124.14	50.83	138.24	32.37	133.44	45.58	57.38
21	E8a_E9a	KnownJunction	0	96.52	51.54	132.81	41.42	136.22	63.81	66.04
22	ER9a	ExonRegion	0	124.10	72.64	176.70	43.34	146.30	56.17	78.02
23	E9a_E10a	KnownJunction	0	70.78	46.19	117.58	26.06	137.00	31.92	57.57
24	I9_SR1	SilentIntronRegion	0	16.60	6.29	14.98	1.76	4.04	1.97	6.92
25	ER10a	ExonRegion	0	75.96	57.09	141.22	36.25	138.35	34.33	76.66
26	E10a_E11a	KnownJunction	0	50.54	44.32	105.36	33.46	95.90	24.25	60.87
27	ER11a	ExonRegion	0	63.33	43.33	135.82	36.44	123.70	38.36	84.62
28	E11a_E12a	KnownJunction	0	45.11	59.56	92.26	25.74	99.45	45.59	59.19
29	ER12a	ExonRegion	0	68.99	67.83	114.11	40.72	124.17	47.05	91.13
30	E12a_E13a	KnownJunction	0	59.17	69.04	94.41	38.60	98.74	37.89	66.13
31	ER13a	ExonRegion	0	66.66	63.78	93.82	37.07	121.41	49.36	84.13
32	E13a_E14a	KnownJunction	0	77.71	53.57	119.63	39.69	122.99	66.44	108.16
33	ER14a	ExonRegion	0	76.29	52.39	101.93	40.59	122.98	54.07	73.17
34	E14a_E15a	KnownJunction	0	79.39	55.30	94.66	39.34	104.73	42.61	58.97
35	E14a_E16a	KnownJunction	0	8.76	2.57	22.94	2.82	20.63	6.27	20.29
36	ER15a	ExonRegion	0	41.32	52.82	53.83	36.05	77.16	43.98	39.10
37	E15_Da	KnownBoundary	0	26.17	42.38	39.50	25.87	57.82	45.29	33.69
38	E15a_E16a	KnownJunction	1	7.24	18.52	15.86	2.95	17.80	13.19	14.40
39	ER15b	ExonRegion	0	24.86	33.06	34.47	25.88	52.32	39.64	31.21
40	E15_Db	NovelBoundary	1	4.67	6.44	7.79	11.92	4.33	1.63	8.18
41	E15b_E16a	KnownJunction	0	26.95	40.01	39.99	24.63	60.47	32.86	33.32
42	I15_SR1	SilentIntronRegion	0	12.72	11.36	16.79	7.34	6.36	4.00	8.21
43	ER16a	ExonRegion	0	54.77	59.88	81.19	40.72	129.38	67.07	84.11
44	E16a_E17a	KnownJunction	0	72.22	51.28	77.17	43.62	197.79	64.72	76.63
45	ER17a	ExonRegion	0	89.83	49.48	119.32	38.01	166.60	75.96	97.72
46	E17_Da	NovelBoundary	1	5.39	6.12	11.19	1.68	14.55	5.98	18.49
47	E17a_E18a	KnownJunction	1	41.42	34.81	93.85	20.86	156.87	81.93	98.74
48	I17	Intron	1	6.83	5.29	5.51	0.74	9.22	0.97	12.67
49	I17_SR1	SilentIntronRegion	1	8.12	7.23	6.71	1.16	11.54	1.11	15.17
50	I17_AR2	ActiveIntronRegion	1	7.89	5.25	4.48	0.30	9.73	0.90	13.42
51	E18_Aa	NovelBoundary	1	14.74	15.71	8.02	1.49	11.87	0.00	26.83
52	ER18a	ExonRegion	0	91.75	58.40	120.48	27.03	185.15	76.85	105.97
53	E18a_E19a	KnownJunction	0	47.18	38.33	83.68	23.24	114.11	54.24	94.95
54	ER19a	ExonRegion	0	59.83	39.41	82.37	21.04	136.99	39.37	82.07
55	E19a_E20a	KnownJunction	0	31.83	26.74	73.72	15.63	87.28	32.43	74.25
56	ER20a	ExonRegion	0	39.63	25.31	56.84	24.72	77.52	36.37	61.36
57	E20a_E21a	KnownJunction	0	41.29	26.51	53.93	17.61	80.25	32.35	39.71
58	ER21a	ExonRegion	0	44.12	35.65	65.01	23.65	98.50	33.44	63.72
59	E21a_E22a	KnownJunction	0	65.17	43.95	75.34	28.93	106.07	47.97	66.71
60	ER22a	ExonRegion	0	35.52	29.54	47.90	18.52	60.79	34.48	35.03
61	ER22b	ExonRegion	0	0.43	1.21	2.71	2.08	5.85	0.00	0.75