Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CLINT1	Gene	0	707.26	722.90	663.80	659.02	376.26	714.17	292.57
2	296951	Transcript	0	742.36	988.67	724.99	860.63	413.13	838.52	337.14
3	ER1a	ExonRegion	0	82.26	245.99	75.11	211.87	56.93	198.25	57.15
4	E1a_E2a	KnownJunction	0	247.93	623.55	262.03	443.75	103.21	508.55	165.38
5	ER2a	ExonRegion	0	385.50	784.09	431.29	619.42	226.49	652.36	230.33
6	E2a_E3a	KnownJunction	0	411.87	900.11	482.30	703.10	295.40	734.31	229.16
7	ER3a	ExonRegion	0	759.99	1053.02	730.89	790.63	382.07	873.30	276.85
8	E3a_E4a	KnownJunction	0	1211.97	1225.90	1053.36	967.96	468.43	1080.75	358.24
9	ER4a	ExonRegion	0	1308.58	1508.75	1223.64	1287.38	519.49	1359.01	452.40
10	E4a_E5a	KnownJunction	0	1478.21	1644.49	1373.60	1399.31	475.53	1434.30	428.61
11	ER5a	ExonRegion	0	1459.61	1489.20	1314.59	1259.57	611.08	1263.48	469.82
12	E5_Da	NovelBoundary	1	478.92	35.62	478.17	32.24	8.88	10.93	3.84
13	E5a_E6a	KnownJunction	0	995.92	1215.55	991.01	1012.31	464.10	1010.49	385.99
14	E5a_E7a	NovelJunction	1	1.50	35.05	2.31	10.76	1.18	11.79	0.00
15	ER6a	ExonRegion	0	1108.44	1354.85	1153.40	1149.99	587.97	1125.24	479.22
16	E6a_E7a	KnownJunction	0	1013.81	1194.43	963.01	969.83	515.78	940.16	429.63
17	ER7a	ExonRegion	0	1066.03	1305.35	1045.83	1219.97	643.78	1039.36	549.54
18	E7a_E8a	KnownJunction	0	634.79	987.57	686.47	949.38	583.77	785.80	446.08
19	E7a_E9a	NovelJunction	1	22.30	15.45	18.90	42.64	1.18	15.54	1.33
20	ER8a	ExonRegion	0	563.00	999.71	588.38	943.84	522.87	737.54	414.90
21	E8a_E9a	KnownJunction	0	680.13	936.26	577.26	859.76	479.41	608.38	351.62
22	E8a_E10a	NovelJunction	0	23.78	53.23	18.51	46.49	0.00	39.58	2.11
23	ER9a	ExonRegion	0	616.32	965.71	601.44	875.67	461.63	721.59	375.42
24	E9a_E10a	KnownJunction	0	534.56	1036.91	582.73	940.55	348.26	867.13	379.75
25	ER10a	ExonRegion	0	462.97	780.51	508.35	750.63	398.26	691.71	309.56
26	E10a_E11a	KnownJunction	0	197.81	388.58	289.91	473.71	204.85	478.40	106.43
27	E10a_E12a	NovelJunction	1	2.32	22.44	12.13	8.45	0.00	11.77	2.81
28	I10_AR1	ActiveIntronRegion	0	146.27	76.77	100.23	32.89	42.93	28.34	26.88
29	E11_Aa	NovelBoundary	0	244.17	172.21	184.31	89.40	52.65	80.32	47.98
30	ER11a	ExonRegion	0	545.94	818.91	573.53	772.14	369.43	789.74	288.87
31	E11a_E12a	KnownJunction	0	633.80	833.44	574.45	760.72	460.46	798.15	335.43
32	ER12a	ExonRegion	0	674.93	446.56	592.20	433.04	322.91	587.83	233.94
33	IG42_AR5	ActiveIntergenicRegion	0	10.04	1.21	7.42	2.22	0.77	3.61	1.50
34	IG42_AR1	ActiveIntergenicRegion	0	5.88	6.70	6.65	4.12	20.33	6.34	10.89