Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EFNA5	Gene	0	88.69	63.75	32.67	17.78	43.68	7.49	66.75
2	333274	Transcript	0	114.73	69.12	43.30	22.98	51.33	9.95	91.52
3	IG43_SR2	SilentIntergenicRegion	0	9.52	7.49	2.26	1.65	3.53	1.57	2.03
4	IG43_AR9	ActiveIntergenicRegion	0	51.91	84.23	13.40	11.71	19.46	12.94	33.45
5	IG43_AR8	ActiveIntergenicRegion	0	75.01	113.31	15.54	16.38	15.08	13.48	33.49
6	IG43_AR7	ActiveIntergenicRegion	0	13.62	47.72	2.41	7.62	1.03	3.00	2.66
7	IG43_AR6	ActiveIntergenicRegion	0	13.77	55.14	1.46	4.32	1.06	4.62	5.29
8	IG43_AR5	ActiveIntergenicRegion	0	13.60	59.41	1.02	3.12	2.27	5.76	5.67
9	IG43_AR4	ActiveIntergenicRegion	0	13.26	59.68	0.68	4.83	3.24	6.13	6.66
10	IG43_AR3	ActiveIntergenicRegion	0	13.58	60.54	0.68	3.95	3.64	5.72	7.42
11	IG43_AR2	ActiveIntergenicRegion	0	11.89	56.81	0.68	3.89	3.43	6.13	10.16
12	IG43_SR1	SilentIntergenicRegion	0	20.25	68.19	4.12	14.40	3.98	5.85	14.65
13	IG43_AR1	ActiveIntergenicRegion	0	42.81	81.81	11.37	17.62	9.55	6.75	23.82
14	ER1a	ExonRegion	0	77.78	79.15	28.13	14.24	36.33	10.44	44.45
15	E1_Da	NovelBoundary	0	5.62	23.54	1.45	3.31	1.08	4.37	0.80
16	E1a_E2a	KnownJunction	0	82.93	87.48	31.82	20.91	33.08	21.87	82.74
17	I1_AR1	ActiveIntronRegion	0	12.62	16.65	1.84	3.49	1.98	2.08	1.12
18	I1_SR1	SilentIntronRegion	1	24.50	38.20	3.27	8.93	3.51	3.04	1.88
19	I1_AR2	ActiveIntronRegion	1	43.55	34.14	7.21	5.56	8.46	2.16	2.15
20	I1_SR2	SilentIntronRegion	1	22.70	8.81	2.92	1.76	3.19	0.95	1.39
21	I1_AR3	ActiveIntronRegion	1	22.09	11.08	2.67	1.93	2.15	0.84	1.03
22	I1_SR5	SilentIntronRegion	1	18.64	5.64	2.23	1.74	2.59	0.67	1.29
23	I1_AR29	ActiveIntronRegion	1	18.85	5.51	0.00	0.00	0.43	0.00	0.09
24	I1_AR30	ActiveIntronRegion	1	20.59	6.07	0.00	0.00	0.81	0.00	1.75
25	I1_AR31	ActiveIntronRegion	1	19.32	6.86	0.00	0.00	0.81	0.00	2.02
26	ER2a	ExonRegion	0	124.03	84.71	56.49	34.24	64.06	14.12	95.56
27	E2a_E3a	KnownJunction	0	92.95	50.65	49.48	23.19	67.22	8.58	112.13
28	I2_AR3	ActiveIntronRegion	1	19.06	7.94	4.97	0.00	3.40	1.23	1.35
29	I2_AR4	ActiveIntronRegion	1	21.68	8.42	3.97	1.89	3.06	0.58	2.57
30	I2_AR11	ActiveIntronRegion	1	32.56	7.67	4.17	2.49	0.00	2.45	1.35
31	I2_AR12	ActiveIntronRegion	1	24.27	10.01	5.65	1.41	0.79	0.59	0.88
32	I2_SR7	SilentIntronRegion	0	21.48	11.40	3.24	1.48	0.41	0.40	3.43
33	E3_Aa	NovelBoundary	1	31.34	13.14	5.16	1.30	0.00	2.71	6.21
34	ER3a	ExonRegion	0	129.92	63.65	53.67	23.39	68.02	7.75	120.16
35	E3a_E4a	KnownJunction	0	170.77	60.84	54.72	31.26	62.06	10.16	107.59
36	E3a_E5a	NovelJunction	0	14.67	22.93	7.31	10.59	2.88	1.53	11.61
37	ER4a	ExonRegion	0	163.78	72.59	52.68	27.90	56.93	8.07	116.20
38	E4a_E5a	KnownJunction	0	126.23	71.35	43.01	21.56	41.22	4.37	96.24
39	ER5a	ExonRegion	0	64.21	51.67	19.72	10.12	33.05	4.22	48.61
40	IG42_SR17	SilentIntergenicRegion	0	16.45	22.69	5.90	3.34	4.14	0.00	6.07
41	IG42_AR18	ActiveIntergenicRegion	0	26.11	21.80	5.07	3.19	13.23	2.10	12.40
42	IG42_SR16	SilentIntergenicRegion	0	43.39	27.69	8.85	3.60	36.50	5.59	15.33
43	IG42_AR17	ActiveIntergenicRegion	0	59.95	33.17	18.65	7.94	40.37	4.33	34.90
44	IG42_SR8	SilentIntergenicRegion	0	0.16	0.00	0.00	0.00	8.06	0.00	0.14
45	IG42_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	7.59	0.00	0.08