Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 MEGF10 Gene 0 1.65 0.04 5.23 2.78 129.76 0.15 0.04 2 274473 Transcript 0 1.38 0.03 5.14 3.47 97.23 0.07 0.05 3 IG37_SR4 SilentIntergenicRegion 0 2.03 0.95 0.00 0.00 9.52 0.00 0.23 4 IG37_AR4 ActiveIntergenicRegion 0 3.24 2.12 0.00 0.00 11.99 0.40 0.41 5 IG37_AR7 ActiveIntergenicRegion 0 0.00 0.00 1.13 0.21 11.32 0.23 0.00 6 ER1a ExonRegion 0 0.01 0.00 3.25 2.75 33.52 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 4.14 1.00 53.16 0.00 0.00 8 E1a_E3a NovelJunction 0 1.03 0.00 15.43 1.44 68.51 0.00 0.00 9 ER2a ExonRegion 0 0.77 0.00 3.07 0.81 56.90 0.00 0.00 10 E2a_E3a KnownJunction 0 0.90 0.00 2.43 1.57 41.43 0.00 0.00 11 ER3a ExonRegion 0 1.51 0.00 7.46 4.70 76.78 0.00 0.00 12 E3a_E4a KnownJunction 0 1.60 0.00 7.29 6.20 120.54 0.00 0.00 13 ER4a ExonRegion 0 0.97 0.00 6.53 4.52 93.20 0.00 0.00 14 E4a_E5a KnownJunction 0 0.97 0.00 3.72 3.12 76.79 0.00 0.00 15 ER5a ExonRegion 0 0.82 0.00 5.07 2.04 74.71 0.00 0.00 16 E5a_E6a KnownJunction 0 0.00 0.00 3.92 3.31 70.17 0.00 0.00 17 ER6a ExonRegion 0 0.31 0.00 3.04 2.86 66.97 0.00 0.00 18 E6a_E7a KnownJunction 0 1.67 0.00 2.39 1.06 64.48 0.00 0.00 19 ER7a ExonRegion 0 0.83 0.00 1.69 2.10 50.74 0.00 0.00 20 E7a_E8a KnownJunction 0 0.00 0.00 1.26 3.63 57.06 0.00 0.00 21 ER8a ExonRegion 0 0.11 0.00 2.73 3.02 70.91 0.00 0.00 22 E8a_E9a KnownJunction 0 0.80 0.00 2.13 6.91 77.43 0.00 0.00 23 ER9a ExonRegion 0 0.43 0.00 4.06 3.55 96.98 0.00 0.00 24 E9a_E10a KnownJunction 0 0.82 0.00 6.05 1.68 96.27 0.00 0.00 25 ER10a ExonRegion 0 1.32 0.00 4.86 4.07 85.84 0.00 0.00 26 E10a_E11a KnownJunction 0 1.65 0.00 7.20 6.12 97.54 0.00 0.00 27 ER11a ExonRegion 0 1.88 0.00 6.28 6.94 111.43 0.00 0.00 28 E11a_E12a KnownJunction 0 2.15 0.00 11.64 10.05 128.91 0.00 0.00 29 ER12a ExonRegion 0 2.31 0.00 5.72 4.20 111.63 0.00 0.00 30 E12a_E13a KnownJunction 0 1.82 0.00 5.13 4.39 128.13 0.00 0.00 31 ER13a ExonRegion 0 2.41 0.00 4.12 4.66 98.71 0.00 0.00 32 E13a_E14a KnownJunction 0 2.99 0.00 2.20 3.36 93.57 0.00 0.00 33 ER14a ExonRegion 0 2.29 0.00 2.95 4.33 85.68 0.90 0.00 34 E14a_E15a KnownJunction 0 0.93 0.00 2.40 6.15 69.37 0.00 0.00 35 ER15a ExonRegion 0 2.44 0.00 2.76 5.02 79.95 0.33 0.00 36 E15a_E16a KnownJunction 0 3.12 0.00 7.85 2.98 99.77 1.66 0.00 37 ER16a ExonRegion 0 1.09 0.00 3.24 4.16 80.19 0.34 0.00 38 E16a_E17a KnownJunction 0 1.54 0.00 6.88 3.33 84.93 0.00 0.00 39 ER17a ExonRegion 0 1.50 0.00 6.43 4.75 104.83 0.00 0.00 40 E17a_E18a KnownJunction 0 0.88 0.00 4.27 7.67 99.03 0.00 0.00 41 ER18a ExonRegion 0 0.22 0.00 5.09 3.22 106.83 0.00 0.00 42 E18a_E19a KnownJunction 0 0.77 0.00 3.69 4.14 97.42 0.00 0.00 43 ER19a ExonRegion 0 0.82 0.00 5.33 2.50 123.76 0.00 0.37 44 E19a_E20a KnownJunction 0 0.00 0.00 4.77 1.63 119.83 0.00 0.53 45 ER20a ExonRegion 0 0.54 0.00 3.84 2.08 123.27 0.00 0.50 46 E20a_E21a KnownJunction 0 1.65 0.00 7.82 4.01 159.64 0.00 0.64 47 ER21a ExonRegion 0 2.33 0.05 9.43 3.74 176.32 0.00 0.39 48 E21a_E22a KnownJunction 0 2.34 1.05 9.97 2.41 204.85 0.00 0.00 49 ER22a ExonRegion 0 1.93 0.61 8.68 3.74 145.10 0.00 0.00 50 E22a_E23a KnownJunction 0 5.61 0.00 6.84 1.14 101.32 0.00 0.00 51 ER23a ExonRegion 0 2.24 0.00 4.60 1.27 107.08 0.00 0.00 52 E23a_E24a KnownJunction 0 0.92 0.00 4.17 2.49 58.92 0.00 0.00 53 ER24a ExonRegion 0 1.93 0.00 5.39 0.64 83.70 0.00 0.00 54 E24a_E25a KnownJunction 0 2.65 0.00 4.63 0.00 99.36 0.00 0.00 55 ER25a ExonRegion 0 1.73 0.00 8.84 3.50 116.71 0.00 0.00 56 E25a_E26a KnownJunction 0 0.00 0.00 9.44 1.57 140.28 0.00 0.00 57 ER26a ExonRegion 0 1.90 0.05 5.30 2.09 156.84 0.23 0.03 58 IG38_SR1 SilentIntergenicRegion 0 0.68 0.00 0.45 0.00 11.42 0.00 0.00 59 IG38_SR2 SilentIntergenicRegion 0 0.21 0.00 1.29 0.00 9.73 0.00 0.00 60 IG38_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.53 0.00 12.32 0.00 0.00 61 IG38_SR3 SilentIntergenicRegion 0 0.49 0.00 0.75 0.00 11.97 0.00 0.00 62 IG38_AR2 ActiveIntergenicRegion 0 0.48 0.00 1.40 0.59 26.06 0.00 0.00 63 IG38_SR4 SilentIntergenicRegion 0 0.71 0.00 1.71 0.40 17.54 0.00 0.00 64 IG38_AR3 ActiveIntergenicRegion 0 0.57 0.60 1.18 0.00 10.96 0.00 0.00