Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 AC140134.2 Gene 0 65.50 6.01 34.30 4.28 53.19 3.48 12.85 2 380734 Transcript 0 40.32 4.32 21.85 2.65 45.66 3.72 7.09 3 380731 Transcript 0 1.87 0.67 1.14 0.00 11.19 0.00 3.67 4 383337 Transcript 0 0.00 0.00 0.00 0.00 0.16 0.00 0.00 5 ER1a ExonRegion 0 1.29 1.97 2.80 0.00 1.90 2.06 0.00 6 E1_Ab KnownBoundary 1 43.88 13.08 37.48 8.83 57.84 4.21 16.71 7 ER1b ExonRegion 0 4.75 1.37 7.33 0.00 5.83 1.14 0.40 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.65 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 105.90 8.00 50.74 2.29 130.98 1.95 11.00 13 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER4a ExonRegion 0 182.03 21.93 96.47 20.56 90.20 17.76 30.97 15 E4a_E5a KnownJunction 0 393.95 50.31 160.20 41.64 253.79 26.08 48.97 16 E4a_E6a NovelJunction 0 13.60 5.18 10.59 3.01 12.49 0.00 1.73 17 E4a_E9a KnownJunction 0 39.10 7.01 26.60 15.60 42.79 16.59 14.43 18 ER5a ExonRegion 0 121.52 18.37 47.22 13.60 40.60 7.56 15.57 19 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER6a ExonRegion 0 52.05 3.87 20.36 2.61 37.21 0.72 7.40 21 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER7a ExonRegion 0 3.73 0.31 1.68 0.00 9.05 0.00 1.70 23 E7_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E7a_E9a NovelJunction 0 53.59 2.31 38.76 0.00 103.71 4.18 8.83 25 ER7b ExonRegion 0 1.87 0.67 1.14 0.00 11.19 0.00 3.67 26 E7_Db NovelBoundary 1 20.68 1.63 10.06 1.14 93.23 0.00 27.72 27 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.16 0.00 0.00 28 E9_Aa NovelBoundary 1 34.78 0.00 19.62 0.00 0.99 0.00 0.87 29 ER9a ExonRegion 0 86.36 11.64 50.00 6.63 65.06 10.71 16.16 30 E9a_E10a KnownJunction 1 153.53 13.08 76.98 4.69 142.95 8.50 14.98 31 E10_Aa NovelBoundary 0 41.24 4.07 21.33 2.74 40.60 9.65 19.92 32 ER10a ExonRegion 0 82.24 13.52 38.24 0.97 148.26 4.77 13.39 33 E10_Da NovelBoundary 0 94.78 10.30 51.42 3.60 200.33 8.71 22.93 34 E10a_E11a KnownJunction 0 15.62 1.00 6.83 0.00 35.22 0.00 2.62 35 ER11a ExonRegion 0 35.19 0.75 20.51 1.21 46.53 0.00 5.39 36 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER12a ExonRegion 0 70.50 2.90 40.23 2.70 65.18 1.30 18.15 38 IG22_AR7 ActiveIntergenicRegion 0 10.14 0.00 4.67 0.00 2.79 0.00 0.67