Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SERINC5 Gene 0 63.03 78.35 43.52 43.72 230.65 40.64 150.43 2 329637 Transcript 0 60.97 75.42 42.48 41.95 237.42 38.92 142.71 3 IG13 Intergenic 0 9.61 1.63 0.99 0.76 4.00 0.66 2.55 4 IG13_SR5 SilentIntergenicRegion 0 10.05 1.94 1.21 1.83 5.37 0.72 2.53 5 IG13_AR7 ActiveIntergenicRegion 0 13.37 4.86 0.68 3.74 12.07 0.00 4.59 6 IG13_AR6 ActiveIntergenicRegion 0 9.48 4.41 0.85 1.49 3.62 0.52 2.93 7 IG13_SR4 SilentIntergenicRegion 0 10.44 1.15 0.59 0.89 3.67 0.71 2.76 8 IG13_AR4 ActiveIntergenicRegion 0 16.31 4.48 0.85 1.10 5.63 0.61 1.98 9 IG13_AR3 ActiveIntergenicRegion 0 22.38 0.46 0.00 1.25 6.98 0.00 4.05 10 IG13_SR3 SilentIntergenicRegion 0 13.70 2.38 1.49 0.32 5.38 0.89 4.14 11 IG13_AR1 ActiveIntergenicRegion 0 20.59 1.95 1.05 0.93 5.30 0.28 4.52 12 ER1a ExonRegion 0 0.03 1.52 0.20 0.42 1.45 0.00 0.73 13 ER2a ExonRegion 0 39.07 64.13 25.90 41.80 144.65 35.80 103.26 14 E2a_E3a KnownJunction 0 36.17 94.08 33.58 59.22 167.36 36.42 112.59 15 ER3a ExonRegion 0 50.91 95.34 43.92 43.53 147.71 47.99 139.03 16 E3a_E4a KnownJunction 0 69.98 90.06 50.30 26.12 215.20 45.21 155.91 17 ER4a ExonRegion 0 75.96 77.33 53.78 33.38 216.29 40.77 163.24 18 E4a_E5a KnownJunction 0 80.65 86.88 44.85 38.44 178.52 29.56 126.04 19 ER5a ExonRegion 0 59.15 81.60 40.25 38.34 172.69 30.69 136.81 20 E5a_E6a KnownJunction 0 53.02 64.18 33.53 28.42 154.48 29.48 128.70 21 E5a_E7a NovelJunction 0 14.74 23.78 6.12 6.94 4.26 6.06 8.33 22 ER6a ExonRegion 0 57.19 69.93 35.93 33.98 210.73 31.16 149.85 23 E6a_E7a KnownJunction 0 50.00 69.28 35.25 41.15 148.85 39.23 132.98 24 ER7a ExonRegion 0 74.50 85.56 43.21 56.70 269.29 46.82 158.57 25 E7a_E8a KnownJunction 0 76.47 94.81 44.03 55.29 261.47 44.17 156.83 26 I7 Intron 1 21.67 4.78 3.50 1.59 16.67 2.03 9.70 27 I7_AR2 ActiveIntronRegion 1 20.42 4.42 2.97 1.69 16.85 2.18 9.78 28 I7_SR2 SilentIntronRegion 1 21.92 5.19 3.68 1.68 15.90 2.19 9.13 29 I7_AR3 ActiveIntronRegion 1 28.38 6.35 4.79 1.70 20.20 1.99 12.22 30 E8_Aa NovelBoundary 1 35.77 3.86 8.95 1.25 8.81 1.37 7.61 31 ER8a ExonRegion 0 113.37 112.99 71.09 65.75 356.90 54.83 208.03 32 E8_Da NovelBoundary 1 19.23 11.59 1.78 0.00 7.19 1.58 4.86 33 E8a_E9a KnownJunction 0 80.15 111.05 64.91 56.65 395.98 65.26 199.69 34 ER9a ExonRegion 0 80.54 93.20 60.88 55.96 394.43 58.68 206.92 35 E9a_E10a KnownJunction 0 75.96 75.53 46.99 47.98 418.25 41.38 164.09 36 I9_AR1 ActiveIntronRegion 1 17.29 4.74 1.67 2.10 5.67 0.29 6.83 37 ER10a ExonRegion 0 80.65 79.42 59.00 59.36 401.12 52.50 199.38 38 E10a_E11a KnownJunction 0 57.98 64.86 53.34 49.85 393.56 42.53 171.07 39 ER11a ExonRegion 0 68.64 71.80 51.04 48.44 335.72 44.64 182.93 40 I11 Intron 0 69.88 30.38 37.04 20.19 196.85 28.33 88.91 41 I11_AR1 ActiveIntronRegion 0 46.83 41.39 26.53 23.80 162.17 26.40 83.03 42 I11_AR2 ActiveIntronRegion 0 140.91 65.46 71.08 48.51 345.75 50.41 172.12 43 I11_SR2 SilentIntronRegion 0 75.04 27.59 42.17 19.88 220.84 25.23 103.84 44 I11_AR3 ActiveIntronRegion 0 67.09 27.17 37.48 16.19 211.87 32.07 86.23 45 ER12a ExonRegion 0 0.07 0.20 0.09 0.12 1.25 0.20 0.35 46 IG12_AR26 ActiveIntergenicRegion 0 9.51 0.34 3.32 0.85 1.94 2.89 7.65 47 IG12_SR15 SilentIntergenicRegion 0 11.24 0.47 4.11 2.16 2.81 0.71 6.22 48 IG12_AR22 ActiveIntergenicRegion 0 10.63 2.13 5.19 2.18 0.20 2.45 6.75 49 IG12_AR21 ActiveIntergenicRegion 0 9.86 2.43 5.08 2.49 0.81 3.47 6.63 50 IG12_AR20 ActiveIntergenicRegion 0 6.21 1.04 4.22 1.47 2.97 0.95 7.65 51 IG12_AR19 ActiveIntergenicRegion 0 3.23 0.12 4.67 1.25 1.62 0.00 12.14 52 IG12_AR18 ActiveIntergenicRegion 0 2.29 0.51 3.48 1.21 1.41 0.00 10.24 53 IG12_SR12 SilentIntergenicRegion 0 3.24 2.30 2.42 0.00 1.68 0.00 9.16 54 IG12_AR17 ActiveIntergenicRegion 0 5.51 3.33 3.50 0.11 2.45 0.00 8.62 55 IG12_AR16 ActiveIntergenicRegion 0 7.07 1.80 2.97 1.25 0.64 0.00 11.56 56 IG12_AR15 ActiveIntergenicRegion 0 6.98 1.90 3.55 0.14 1.79 0.00 8.06 57 IG12_AR10 ActiveIntergenicRegion 0 5.57 3.93 2.29 1.02 1.46 2.71 7.51