Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C5orf44	Gene	0	26.95	20.41	47.00	19.15	62.04	26.59	50.57
2	399438	Transcript	0	6.64	4.09	14.41	2.47	33.14	4.10	15.43
3	231526	Transcript	0	22.83	18.90	38.51	16.21	62.99	25.65	49.51
4	IG40	Intergenic	0	3.51	3.02	4.27	3.86	10.71	2.93	6.81
5	IG40_AR2	ActiveIntergenicRegion	0	5.96	5.60	7.13	6.40	19.32	6.00	12.51
6	ER1a	ExonRegion	0	55.40	16.85	57.65	17.42	116.84	22.56	38.83
7	E1_Da	NovelBoundary	0	0.00	9.51	3.98	2.79	0.00	1.63	5.39
8	E1a_E2a	KnownJunction	0	73.57	33.42	79.07	33.02	46.89	41.65	63.00
9	I1_AR6	ActiveIntronRegion	0	10.35	11.51	14.27	12.23	19.00	18.86	11.19
10	ER2a	ExonRegion	0	28.77	26.94	37.31	29.44	22.75	22.39	34.87
11	E2a_E3a	KnownJunction	1	15.19	29.74	23.91	28.09	24.41	11.28	23.58
12	ER3a	ExonRegion	0	56.58	32.40	75.72	31.47	51.31	30.21	52.38
13	E3a_E4a	KnownJunction	0	74.70	23.72	82.59	45.08	116.16	31.44	59.73
14	ER4a	ExonRegion	0	38.39	38.55	63.85	30.88	89.60	26.94	59.28
15	E4a_E5a	KnownJunction	0	31.31	34.02	77.28	23.24	49.10	21.17	54.04
16	ER5a	ExonRegion	0	26.70	41.35	60.25	28.97	52.37	28.47	63.97
17	E5a_E6a	KnownJunction	0	34.77	30.55	67.31	29.83	52.68	19.72	88.21
18	ER6a	ExonRegion	0	33.18	31.82	80.71	26.37	63.37	27.74	74.64
19	E6a_E7a	KnownJunction	0	28.52	39.46	82.04	23.87	88.45	26.08	55.76
20	ER7a	ExonRegion	0	24.20	14.85	49.52	10.45	76.81	20.49	41.39
21	E7a_E9a	KnownJunction	0	12.55	4.18	23.27	3.06	62.43	8.20	27.26
22	E7b_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER7b	ExonRegion	0	0.00	1.21	0.00	0.00	0.00	0.00	0.00
24	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	I8_SR2	SilentIntronRegion	0	5.25	7.53	6.17	2.43	5.06	4.76	6.91
27	ER9a	ExonRegion	0	32.58	31.39	74.89	31.67	82.97	33.39	79.35
28	E9a_E10a	KnownJunction	0	49.64	36.65	88.97	39.80	107.22	47.25	103.23
29	ER10a	ExonRegion	0	44.80	37.48	89.63	38.22	102.82	50.24	97.56
30	E10_Da	KnownBoundary	1	1.00	5.41	13.03	3.98	5.56	0.00	7.14
31	E10a_E11a	KnownJunction	0	28.84	28.11	65.34	26.82	141.54	32.94	98.07
32	ER10b	ExonRegion	0	0.74	4.00	5.55	1.88	3.86	0.00	3.61
33	E10_Db	NovelBoundary	0	2.14	9.96	10.78	5.82	9.45	3.83	9.07
34	I10_SR1	SilentIntronRegion	1	4.08	3.94	13.16	3.33	7.65	0.64	8.43
35	E11_Aa	NovelBoundary	1	1.97	0.00	15.49	1.52	5.49	7.02	8.48
36	ER11a	ExonRegion	0	49.82	34.12	80.34	25.48	123.32	40.77	96.41
37	E11a_E12a	KnownJunction	0	40.97	31.47	63.29	37.60	95.30	36.61	73.35
38	E12_Aa	NovelBoundary	1	17.29	2.13	34.96	3.20	8.37	3.91	6.05
39	ER12a	ExonRegion	0	43.27	45.32	75.11	31.32	116.45	50.32	97.90
40	E12a_E13a	KnownJunction	0	46.92	37.88	70.07	28.61	105.49	74.64	93.80
41	ER13a	ExonRegion	0	18.52	10.90	30.94	12.23	47.83	21.17	35.59