Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ITGA1 Gene 0 2.10 0.81 223.43 63.03 23.18 89.86 18.91 2 282588 Transcript 0 2.18 0.81 227.73 74.18 25.51 102.71 21.04 3 ER1a ExonRegion 0 0.00 1.15 22.25 15.91 1.38 28.04 1.39 4 E1a_E2a KnownJunction 0 0.00 1.63 81.01 36.14 2.10 71.56 4.43 5 Ix_AR1 ActiveIntronRegion 0 1.56 2.07 46.00 8.86 0.85 15.76 1.15 6 Ix_AR2 ActiveIntronRegion 0 1.24 1.36 57.55 6.61 0.39 13.31 0.92 7 Ix_SR2 SilentIntronRegion 0 0.46 0.49 54.94 8.60 0.57 9.93 0.67 8 Ix_AR3 ActiveIntronRegion 0 0.00 0.00 48.73 7.56 0.97 11.28 0.67 9 Ix_AR4 ActiveIntronRegion 0 0.93 1.01 47.84 7.95 1.62 12.21 0.67 10 Ix_AR5 ActiveIntronRegion 0 2.86 0.65 57.13 9.23 2.06 25.21 0.69 11 Ix_AR10 ActiveIntronRegion 0 3.84 4.86 45.50 26.19 2.56 72.54 1.01 12 I1_SR1 SilentIntronRegion 0 4.66 1.70 10.69 6.67 12.27 5.72 4.81 13 I1_AR1 ActiveIntronRegion 0 6.30 1.85 14.00 4.06 10.49 7.18 3.73 14 ER2a ExonRegion 0 0.74 1.21 133.72 63.11 11.44 105.93 9.42 15 E2a_E3a KnownJunction 0 2.39 0.00 174.67 77.78 15.98 153.83 12.22 16 ER3a ExonRegion 0 1.86 0.00 216.58 105.32 19.06 155.29 19.10 17 E3a_E4a KnownJunction 0 1.67 0.00 224.09 85.74 13.05 134.11 17.28 18 ER4a ExonRegion 0 2.63 0.00 198.21 87.02 20.10 123.25 21.68 19 E4a_E5a KnownJunction 0 2.59 0.00 215.17 101.40 18.65 109.45 21.76 20 ER5a ExonRegion 0 1.85 0.00 229.59 96.39 22.50 122.61 25.72 21 E5a_E6a KnownJunction 0 1.03 0.00 163.52 77.02 22.61 109.10 23.40 22 ER6a ExonRegion 0 0.72 0.00 158.85 70.66 12.31 102.01 18.10 23 E6a_E7a KnownJunction 0 0.00 0.00 138.47 57.57 12.82 80.99 13.83 24 ER7a ExonRegion 0 0.50 0.62 137.30 62.39 14.28 68.54 13.85 25 E7a_E8a KnownJunction 0 0.88 0.00 134.05 60.71 8.67 59.23 15.88 26 ER8a ExonRegion 0 1.50 1.44 139.78 57.93 12.67 69.34 14.36 27 E8a_E9a KnownJunction 0 1.57 2.81 150.95 65.86 13.79 70.51 10.32 28 ER9a ExonRegion 0 2.30 1.89 151.03 41.87 13.90 60.86 15.41 29 E9a_E10a KnownJunction 0 0.00 1.31 110.62 35.25 13.28 33.98 13.56 30 ER10a ExonRegion 0 2.81 1.02 143.10 53.23 16.34 55.10 13.36 31 E10a_E11a KnownJunction 0 2.85 1.63 146.22 63.15 20.61 66.68 12.78 32 ER11a ExonRegion 0 2.01 0.91 174.67 72.28 21.15 75.53 19.88 33 E11a_E12a KnownJunction 0 3.79 0.00 166.22 83.06 17.84 48.00 14.65 34 E12_Aa NovelBoundary 1 2.92 0.00 72.14 4.80 1.13 2.60 0.00 35 ER12a ExonRegion 0 2.86 0.74 182.31 90.87 24.27 58.44 18.19 36 E12a_E13a KnownJunction 0 2.17 1.16 209.95 85.23 29.05 83.45 19.69 37 ER13a ExonRegion 0 3.23 2.08 231.90 85.35 28.59 92.22 19.83 38 E13a_E14a KnownJunction 0 4.11 2.65 255.10 78.37 33.15 99.35 15.11 39 ER14a ExonRegion 0 3.11 1.04 207.82 78.73 25.01 99.32 17.30 40 E14a_E15a KnownJunction 0 1.85 1.42 184.10 69.22 19.30 91.44 15.05 41 ER15a ExonRegion 0 1.87 0.49 192.35 50.56 19.42 75.78 14.11 42 E15a_E16a KnownJunction 0 1.90 0.00 200.68 62.63 21.05 78.93 10.07 43 ER16a ExonRegion 0 3.89 0.00 310.63 76.42 31.89 96.12 23.23 44 E16a_E17a KnownJunction 0 2.19 0.00 315.11 67.78 30.18 83.11 22.04 45 E16a_E18a NovelJunction 0 1.03 0.00 10.48 6.69 0.00 20.13 0.00 46 ER17a ExonRegion 0 4.55 0.67 324.57 72.33 44.77 78.53 27.11 47 E17a_E18a KnownJunction 0 3.10 0.00 375.48 85.45 36.93 94.87 38.47 48 ER18a ExonRegion 0 4.44 1.01 364.85 95.07 39.99 149.81 36.99 49 E18a_E19a KnownJunction 0 5.72 1.23 428.71 114.95 33.13 192.61 47.69 50 ER19a ExonRegion 0 4.49 1.22 331.18 98.76 49.41 156.44 35.27 51 E19a_E20a KnownJunction 0 4.49 0.00 322.59 81.79 33.68 146.38 27.23 52 ER20a ExonRegion 0 3.49 0.58 279.82 82.25 36.85 129.71 26.02 53 E20a_E21a KnownJunction 0 3.15 1.63 252.40 81.08 41.82 111.49 20.74 54 ER21a ExonRegion 0 2.90 0.58 323.93 82.20 34.17 131.10 32.71 55 E21a_E22a KnownJunction 0 3.64 0.00 345.42 71.71 35.99 123.09 31.31 56 ER22a ExonRegion 0 2.19 0.00 304.50 78.72 40.33 123.99 27.49 57 E22a_E23a KnownJunction 0 2.37 0.00 287.19 83.96 41.47 113.82 30.30 58 ER23a ExonRegion 0 1.60 0.33 299.52 81.80 33.46 130.81 36.38 59 E23a_E24a KnownJunction 0 0.00 1.55 280.01 65.32 37.44 111.84 22.67 60 ER24a ExonRegion 0 1.87 3.82 284.96 92.13 42.46 135.14 37.72 61 E24a_E25a KnownJunction 0 2.85 2.60 230.93 92.76 37.44 130.30 33.62 62 ER25a ExonRegion 0 1.76 0.82 275.59 95.43 38.58 152.12 34.35 63 E25a_E26a KnownJunction 0 0.83 0.00 300.35 101.54 36.54 175.14 30.51 64 ER26a ExonRegion 0 2.61 0.00 300.18 107.94 41.21 156.62 27.94 65 E26a_E27a KnownJunction 0 2.99 0.00 278.81 86.39 39.74 134.67 17.83 66 ER27a ExonRegion 0 1.25 0.33 257.48 75.65 28.16 106.85 16.26 67 E27a_E28a KnownJunction 0 1.03 1.47 201.30 64.45 19.32 87.13 14.92 68 ER28a ExonRegion 0 0.79 1.12 207.18 46.25 15.02 90.28 13.47 69 E28a_E29a KnownJunction 0 0.00 1.31 206.83 47.41 15.19 75.79 14.33 70 ER29a ExonRegion 0 1.35 0.61 216.81 27.96 14.30 53.72 11.09 71 IG18 Intergenic 0 0.21 0.36 20.72 6.12 1.52 12.09 0.86 72 IG18_AR1 ActiveIntergenicRegion 0 1.03 0.46 136.85 31.85 11.23 52.63 6.21 73 IG18_AR3 ActiveIntergenicRegion 0 0.19 0.31 60.26 16.77 5.62 41.52 2.03 74 IG18_SR2 SilentIntergenicRegion 0 0.00 0.00 13.91 2.61 0.11 10.50 0.46 75 IG18_AR4 ActiveIntergenicRegion 0 0.00 0.67 13.04 3.56 0.11 13.00 0.07 76 IG18_SR3 SilentIntergenicRegion 0 0.00 0.00 14.64 3.37 0.13 18.74 1.49 77 IG18_AR5 ActiveIntergenicRegion 0 0.00 0.20 5.63 3.50 0.43 10.04 0.37